RNA–Protein interactions for RNA: ENST00000546361.6

CHERP-203, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHERP, Length 4,173 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-203ENST00000546361 DDX10Q13206 875 aaKnown RBP16.25■□□□□ 0.19
CHERP-203ENST00000546361 PDS5BQ9NTI5 1447 aa16.24■□□□□ 0.19
CHERP-203ENST00000546361 SENP3Q9H4L4 574 aaPredicted RBP16.23■□□□□ 0.19
CHERP-203ENST00000546361 ARID4BQ4LE39 1312 aaPredicted RBP16.22■□□□□ 0.19
CHERP-203ENST00000546361 ZBTB47Q9UFB7 747 aaPredicted RBP16.21■□□□□ 0.19
CHERP-203ENST00000546361 SMARCA2P51531 1590 aa16.21■□□□□ 0.19
CHERP-203ENST00000546361 CANXP27824 592 aaKnown RBP16.21■□□□□ 0.19
CHERP-203ENST00000546361 TDRD9Q8NDG6 1382 aaKnown RBP16.21■□□□□ 0.18
CHERP-203ENST00000546361 SOGA1O94964 1423 aa16.2■□□□□ 0.18
CHERP-203ENST00000546361 BCL11AQ9H165 835 aa16.2■□□□□ 0.18
CHERP-203ENST00000546361 RGL3Q3MIN7 710 aa16.19■□□□□ 0.18
CHERP-203ENST00000546361 ATAD2BQ9ULI0 1458 aa16.17■□□□□ 0.18
CHERP-203ENST00000546361 PPP1R15AO75807 674 aaPredicted RBP16.16■□□□□ 0.18
CHERP-203ENST00000546361 CADPSQ9ULU8 1353 aa16.14■□□□□ 0.17
CHERP-203ENST00000546361 HIRIP3Q9BW71 556 aaPredicted RBP16.14■□□□□ 0.17
CHERP-203ENST00000546361 TRHP20396 242 aaPredicted RBP16.14■□□□□ 0.17
CHERP-203ENST00000546361 FAM9BQ8IZU0 186 aa16.11■□□□□ 0.17
CHERP-203ENST00000546361 GTF3C3Q9Y5Q9 886 aa16.1■□□□□ 0.17
CHERP-203ENST00000546361 SALL2Q9Y467 1007 aaPredicted RBP16.1■□□□□ 0.17
CHERP-203ENST00000546361 EIF4G1Q04637 1599 aaKnown RBP16.1■□□□□ 0.17
CHERP-203ENST00000546361 TMC1Q8TDI8 760 aa16.09■□□□□ 0.17
CHERP-203ENST00000546361 EIF4G2P78344 907 aaKnown RBP eCLIP16.08■□□□□ 0.16
CHERP-203ENST00000546361 FHAD1B1AJZ9 1412 aa16.07■□□□□ 0.16
CHERP-203ENST00000546361 ABCC8Q09428 1581 aa16.07■□□□□ 0.16
CHERP-203ENST00000546361 HNRNPUQ00839 825 aaKnown RBP eCLIP16.07■□□□□ 0.16
CHERP-203ENST00000546361 CCNB3Q8WWL7 1395 aa16.06■□□□□ 0.16
CHERP-203ENST00000546361 ACIN1Q9UKV3 1341 aaKnown RBP16.06■□□□□ 0.16
CHERP-203ENST00000546361 C14orf37Q86TY3 774 aa16.05■□□□□ 0.16
CHERP-203ENST00000546361 SCAF1Q9H7N4 1312 aaKnown RBP16.05■□□□□ 0.16
CHERP-203ENST00000546361 PLEKHG5O94827 1062 aa16.03■□□□□ 0.16
CHERP-203ENST00000546361 CC2D2AQ9P2K1 1620 aa16■□□□□ 0.15
CHERP-203ENST00000546361 CARMIL2Q6F5E8 1435 aa16■□□□□ 0.15
CHERP-203ENST00000546361 MRS2Q9HD23 443 aa15.99■□□□□ 0.15
CHERP-203ENST00000546361 MLECQ14165 292 aa15.99■□□□□ 0.15
CHERP-203ENST00000546361 WDR43Q15061 677 aaKnown RBP eCLIP15.97■□□□□ 0.15
CHERP-203ENST00000546361 SIN3AQ96ST3 1273 aa15.95■□□□□ 0.14
CHERP-203ENST00000546361 JPH4Q96JJ6 628 aa15.94■□□□□ 0.14
CHERP-203ENST00000546361 CARD11Q9BXL7 1154 aa15.93■□□□□ 0.14
CHERP-203ENST00000546361 GGT6Q6P531 493 aa15.93■□□□□ 0.14
CHERP-203ENST00000546361 KANK4Q5T7N3 995 aaPredicted RBP15.92■□□□□ 0.14
CHERP-203ENST00000546361 ZBTB7CA1YPR0 619 aa15.91■□□□□ 0.14
CHERP-203ENST00000546361 NCAPD3P42695 1498 aa15.91■□□□□ 0.14
CHERP-203ENST00000546361 EFCAB2Q5VUJ9 269 aa15.9■□□□□ 0.14
CHERP-203ENST00000546361 RTL5Q5HYW3 569 aaPredicted RBP15.9■□□□□ 0.14
CHERP-203ENST00000546361 A0A0G2JS52 829 aa15.89■□□□□ 0.13
CHERP-203ENST00000546361 CDCA8Q53HL2 280 aa15.88■□□□□ 0.13
CHERP-203ENST00000546361 VPS8Q8N3P4 1428 aa15.88■□□□□ 0.13
CHERP-203ENST00000546361 POGKQ9P215 609 aa15.87■□□□□ 0.13
CHERP-203ENST00000546361 PEG3Q9GZU2 1588 aa15.86■□□□□ 0.13
CHERP-203ENST00000546361 FKBP8Q14318 412 aa15.85■□□□□ 0.13
CHERP-203ENST00000546361 MIER1Q8N108 512 aa15.85■□□□□ 0.13
CHERP-203ENST00000546361 FANCD2Q9BXW9 1451 aa15.85■□□□□ 0.13
CHERP-203ENST00000546361 FMN1Q68DA7 1419 aa15.85■□□□□ 0.13
CHERP-203ENST00000546361 DCAF11Q8TEB1 546 aa15.84■□□□□ 0.13
CHERP-203ENST00000546361 HAP1P54257 671 aaPredicted RBP15.83■□□□□ 0.13
CHERP-203ENST00000546361 KNSTRNQ9Y448 316 aa15.83■□□□□ 0.13
CHERP-203ENST00000546361 PPM1GO15355 546 aaPredicted RBP15.83■□□□□ 0.12
CHERP-203ENST00000546361 KANK1Q14678 1352 aa15.82■□□□□ 0.12
CHERP-203ENST00000546361 LMOD2Q6P5Q4 547 aa15.82■□□□□ 0.12
CHERP-203ENST00000546361 RAPGEF2Q9Y4G8 1499 aa15.81■□□□□ 0.12
CHERP-203ENST00000546361 NPM2Q86SE8 214 aaKnown RBP15.8■□□□□ 0.12
CHERP-203ENST00000546361 CYB5RLQ6IPT4 315 aa15.79■□□□□ 0.12
CHERP-203ENST00000546361 PKD2Q13563 968 aa15.79■□□□□ 0.12
CHERP-203ENST00000546361 HDGFP51858 240 aaKnown RBP15.78■□□□□ 0.12
CHERP-203ENST00000546361 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.78■□□□□ 0.12
CHERP-203ENST00000546361 CFAP53Q96M91 514 aa15.77■□□□□ 0.12
CHERP-203ENST00000546361 FHOD3Q2V2M9 1422 aa15.77■□□□□ 0.11
CHERP-203ENST00000546361 ARHGAP35Q9NRY4 1499 aa15.77■□□□□ 0.11
CHERP-203ENST00000546361 OSCARQ8IYS5 282 aa15.77■□□□□ 0.11
CHERP-203ENST00000546361 HMGXB3Q12766 1538 aa15.77■□□□□ 0.11
CHERP-203ENST00000546361 RUSC2Q8N2Y8 1516 aa15.77■□□□□ 0.11
CHERP-203ENST00000546361 SENP3-EIF4A1A0A087X0R7 540 aa15.75■□□□□ 0.11
CHERP-203ENST00000546361 HNRNPMP52272 730 aaKnown RBP eCLIP15.75■□□□□ 0.11
CHERP-203ENST00000546361 FOXD1Q16676 465 aa15.75■□□□□ 0.11
CHERP-203ENST00000546361 KIF3BO15066 747 aa15.75■□□□□ 0.11
CHERP-203ENST00000546361 CCDC136Q96JN2 1154 aa15.72■□□□□ 0.11
CHERP-203ENST00000546361 SAFB2Q14151 953 aaKnown RBP eCLIP15.72■□□□□ 0.11
CHERP-203ENST00000546361 NUP155O75694 1391 aa15.71■□□□□ 0.11
CHERP-203ENST00000546361 SETD5Q9C0A6 1442 aa15.71■□□□□ 0.11
CHERP-203ENST00000546361 TNNT2P45379 298 aaPredicted RBP15.71■□□□□ 0.1
CHERP-203ENST00000546361 SPAG9O60271 1321 aaKnown RBP15.69■□□□□ 0.1
CHERP-203ENST00000546361 PTPRGP23470 1445 aa15.69■□□□□ 0.1
CHERP-203ENST00000546361 TIMELESSQ9UNS1 1208 aa15.69■□□□□ 0.1
CHERP-203ENST00000546361 RSPH4AQ5TD94 716 aa15.68■□□□□ 0.1
CHERP-203ENST00000546361 NEUROD2Q15784 382 aa15.68■□□□□ 0.1
CHERP-203ENST00000546361 ANKRD30AQ9BXX3 1397 aa15.68■□□□□ 0.1
CHERP-203ENST00000546361 ANP32AP39687 249 aaKnown RBP15.68■□□□□ 0.1
CHERP-203ENST00000546361 MPHOSPH9Q99550 1183 aa15.68■□□□□ 0.1
CHERP-203ENST00000546361 STK26Q9P289 416 aa15.68■□□□□ 0.1
CHERP-203ENST00000546361 TMF1P82094 1093 aa15.67■□□□□ 0.1
CHERP-203ENST00000546361 SRPK2P78362 688 aaKnown RBP15.67■□□□□ 0.1
CHERP-203ENST00000546361 SYNJ1O43426 1573 aa15.66■□□□□ 0.1
CHERP-203ENST00000546361 NUDCQ9Y266 331 aa15.65■□□□□ 0.1
CHERP-203ENST00000546361 CFTRP13569 1480 aa15.65■□□□□ 0.1
CHERP-203ENST00000546361 IGF1RP08069 1367 aa15.65■□□□□ 0.1
CHERP-203ENST00000546361 IRX6P78412 446 aaPredicted RBP15.64■□□□□ 0.09
CHERP-203ENST00000546361 UPF2Q9HAU5 1272 aaKnown RBP15.64■□□□□ 0.09
CHERP-203ENST00000546361 NESP48681 1621 aa15.63■□□□□ 0.09
CHERP-203ENST00000546361 CC2D1BQ5T0F9 858 aaKnown RBP15.63■□□□□ 0.09
CHERP-203ENST00000546361 RAD54L2Q9Y4B4 1467 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 135.8 ms