RNA–Protein interactions for RNA: ENST00000545174.5

NEK6-214, Transcript of NIMA related kinase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK6, Length 2,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-214ENST00000545174 FHOD3Q2V2M9 1422 aa32.57■■■□□ 2.8
NEK6-214ENST00000545174 LAMC3Q9Y6N6 1575 aa32.54■■■□□ 2.8
NEK6-214ENST00000545174 LRRC9Q6ZRR7 1453 aa32.52■■■□□ 2.8
NEK6-214ENST00000545174 ACIN1Q9UKV3 1341 aaKnown RBP32.52■■■□□ 2.8
NEK6-214ENST00000545174 PHLDB1Q86UU1 1377 aa32.5■■■□□ 2.79
NEK6-214ENST00000545174 FHAD1B1AJZ9 1412 aa32.48■■■□□ 2.79
NEK6-214ENST00000545174 PCF11O94913 1555 aaKnown RBP32.48■■■□□ 2.79
NEK6-214ENST00000545174 MAP3K1Q13233 1512 aa32.47■■■□□ 2.79
NEK6-214ENST00000545174 CLSPNQ9HAW4 1339 aa32.46■■■□□ 2.79
NEK6-214ENST00000545174 MIER1Q8N108 512 aa32.44■■■□□ 2.78
NEK6-214ENST00000545174 FAM50AQ14320 339 aaKnown RBP32.41■■■□□ 2.78
NEK6-214ENST00000545174 PDS5BQ9NTI5 1447 aa32.41■■■□□ 2.78
NEK6-214ENST00000545174 CUL7Q14999 1698 aa32.39■■■□□ 2.78
NEK6-214ENST00000545174 RAB3GAP2Q9H2M9 1393 aa32.37■■■□□ 2.77
NEK6-214ENST00000545174 WDR97A6NE52 1622 aa32.36■■■□□ 2.77
NEK6-214ENST00000545174 GAPVD1Q14C86 1478 aa32.34■■■□□ 2.77
NEK6-214ENST00000545174 YTHDC1Q96MU7 727 aaKnown RBP32.32■■■□□ 2.76
NEK6-214ENST00000545174 KIF21AQ7Z4S6 1674 aa32.32■■■□□ 2.76
NEK6-214ENST00000545174 CTTNBP2Q8WZ74 1663 aa32.29■■■□□ 2.76
NEK6-214ENST00000545174 ABCA5Q8WWZ7 1642 aa32.29■■■□□ 2.76
NEK6-214ENST00000545174 CENPBP07199 599 aaPredicted RBP32.29■■■□□ 2.76
NEK6-214ENST00000545174 EFCAB5A4FU69 1503 aa32.29■■■□□ 2.76
NEK6-214ENST00000545174 CFAP43Q8NDM7 1665 aa32.29■■■□□ 2.76
NEK6-214ENST00000545174 CASKIN1Q8WXD9 1431 aa32.28■■■□□ 2.76
NEK6-214ENST00000545174 FYCO1Q9BQS8 1478 aa32.26■■■□□ 2.75
NEK6-214ENST00000545174 SETD5Q9C0A6 1442 aa32.21■■■□□ 2.75
NEK6-214ENST00000545174 GTF3C3Q9Y5Q9 886 aa32.19■■■□□ 2.74
NEK6-214ENST00000545174 AQRO60306 1485 aaKnown RBP eCLIP32.18■■■□□ 2.742e-7■□□□□ 10.1
NEK6-214ENST00000545174 FMN1Q68DA7 1419 aa32.17■■■□□ 2.74
NEK6-214ENST00000545174 MAPKBP1O60336 1514 aa32.16■■■□□ 2.74
NEK6-214ENST00000545174 SNAPC4Q5SXM2 1469 aa32.16■■■□□ 2.74
NEK6-214ENST00000545174 TARBP1Q13395 1621 aaKnown RBP32.13■■■□□ 2.73
NEK6-214ENST00000545174 SIN3AQ96ST3 1273 aa32.09■■■□□ 2.73
NEK6-214ENST00000545174 SAMD9Q5K651 1589 aa32.07■■■□□ 2.72
NEK6-214ENST00000545174 MTUS2Q5JR59 1369 aa32.06■■■□□ 2.72
NEK6-214ENST00000545174 LRRIQ1Q96JM4 1722 aa32.01■■■□□ 2.71
NEK6-214ENST00000545174 FGD6Q6ZV73 1430 aa32■■■□□ 2.71
NEK6-214ENST00000545174 GRIN2BQ13224 1484 aa31.98■■■□□ 2.71
NEK6-214ENST00000545174 PTPRKQ15262 1439 aa31.93■■■□□ 2.7
NEK6-214ENST00000545174 MRC2Q9UBG0 1479 aa31.92■■■□□ 2.7
NEK6-214ENST00000545174 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.92■■■□□ 2.71e-7■■■■■ 59.4
NEK6-214ENST00000545174 ARID3CA6NKF2 412 aa31.9■■■□□ 2.7
NEK6-214ENST00000545174 NCOA2Q15596 1464 aa31.9■■■□□ 2.7
NEK6-214ENST00000545174 PBRM1Q86U86 1689 aa31.89■■■□□ 2.7
NEK6-214ENST00000545174 ZNF608Q9ULD9 1512 aaPredicted RBP31.88■■■□□ 2.69
NEK6-214ENST00000545174 MAGI3Q5TCQ9 1506 aa31.84■■■□□ 2.69
NEK6-214ENST00000545174 MYOM3Q5VTT5 1437 aa31.81■■■□□ 2.68
NEK6-214ENST00000545174 ADAMTS12P58397 1594 aa31.81■■■□□ 2.68
NEK6-214ENST00000545174 IQGAP2Q13576 1575 aa31.78■■■□□ 2.68
NEK6-214ENST00000545174 THOC2Q8NI27 1593 aaKnown RBP31.73■■■□□ 2.67
NEK6-214ENST00000545174 CCDC18Q5T9S5 1454 aa31.73■■■□□ 2.67
NEK6-214ENST00000545174 EHBP1L1Q8N3D4 1523 aa31.72■■■□□ 2.67
NEK6-214ENST00000545174 SUPT6HQ7KZ85 1726 aaKnown RBP31.72■■■□□ 2.67
NEK6-214ENST00000545174 HIRIP3Q9BW71 556 aaPredicted RBP31.71■■■□□ 2.67
NEK6-214ENST00000545174 CHIC2Q9UKJ5 165 aa31.71■■■□□ 2.67
NEK6-214ENST00000545174 HFM1A2PYH4 1435 aa31.71■■■□□ 2.67
NEK6-214ENST00000545174 CDK13Q14004 1512 aaKnown RBP31.69■■■□□ 2.66
NEK6-214ENST00000545174 UGGT2Q9NYU1 1516 aa31.69■■■□□ 2.66
NEK6-214ENST00000545174 IFT140Q96RY7 1462 aa31.68■■■□□ 2.66
NEK6-214ENST00000545174 NAIPQ13075 1403 aa31.68■■■□□ 2.66
NEK6-214ENST00000545174 RRP7BPQ9NSQ0 103 aa31.67■■■□□ 2.66
NEK6-214ENST00000545174 EPRSP07814 1512 aaKnown RBP31.67■■■□□ 2.66
NEK6-214ENST00000545174 PPP1R15AO75807 674 aaPredicted RBP31.66■■■□□ 2.66
NEK6-214ENST00000545174 PTPN23Q9H3S7 1636 aa31.65■■■□□ 2.66
NEK6-214ENST00000545174 ARHGEF11O15085 1522 aa31.65■■■□□ 2.66
NEK6-214ENST00000545174 WDR62O43379 1518 aa31.63■■■□□ 2.65
NEK6-214ENST00000545174 HECW1Q76N89 1606 aa31.61■■■□□ 2.65
NEK6-214ENST00000545174 KCNH8Q96L42 1107 aa31.61■■■□□ 2.65
NEK6-214ENST00000545174 UACAQ9BZF9 1416 aa31.6■■■□□ 2.65
NEK6-214ENST00000545174 DDX10Q13206 875 aaKnown RBP31.6■■■□□ 2.65
NEK6-214ENST00000545174 TIMELESSQ9UNS1 1208 aa31.6■■■□□ 2.65
NEK6-214ENST00000545174 DISP1Q96F81 1524 aa31.53■■■□□ 2.64
NEK6-214ENST00000545174 KIAA0586Q9BVV6 1533 aa31.52■■■□□ 2.64
NEK6-214ENST00000545174 ERCC6Q03468 1493 aa31.52■■■□□ 2.64
NEK6-214ENST00000545174 TONSLQ96HA7 1378 aa31.51■■■□□ 2.63
NEK6-214ENST00000545174 EIF4G3O43432 1585 aaKnown RBP31.5■■■□□ 2.63
NEK6-214ENST00000545174 GRIN2AQ12879 1464 aa31.49■■■□□ 2.63
NEK6-214ENST00000545174 TCOF1Q13428 1488 aaKnown RBP31.48■■■□□ 2.63
NEK6-214ENST00000545174 FBLN2P98095 1184 aa31.48■■■□□ 2.63
NEK6-214ENST00000545174 TRIM52Q96A61 297 aa31.45■■■□□ 2.63
NEK6-214ENST00000545174 KIAA0556O60303 1618 aa31.45■■■□□ 2.62
NEK6-214ENST00000545174 CHMP7Q8WUX9 453 aaPredicted RBP31.44■■■□□ 2.62
NEK6-214ENST00000545174 ZNF644Q9H582 1327 aaPredicted RBP31.43■■■□□ 2.62
NEK6-214ENST00000545174 KDM6BO15054 1643 aa31.42■■■□□ 2.62
NEK6-214ENST00000545174 NUP153P49790 1475 aaKnown RBP31.41■■■□□ 2.62
NEK6-214ENST00000545174 DENND4BO75064 1496 aaPredicted RBP31.38■■■□□ 2.61
NEK6-214ENST00000545174 MIA2Q96PC5 1412 aa31.38■■■□□ 2.61
NEK6-214ENST00000545174 FOXD1Q16676 465 aa31.36■■■□□ 2.61
NEK6-214ENST00000545174 PELP1Q8IZL8 1130 aaKnown RBP31.33■■■□□ 2.61
NEK6-214ENST00000545174 CEP170Q5SW79 1584 aa31.3■■■□□ 2.6
NEK6-214ENST00000545174 MPHOSPH9Q99550 1183 aa31.3■■■□□ 2.6
NEK6-214ENST00000545174 RAPGEF6Q8TEU7 1601 aa31.29■■■□□ 2.6
NEK6-214ENST00000545174 KDM5BQ9UGL1 1544 aa31.29■■■□□ 2.6
NEK6-214ENST00000545174 PLB1Q6P1J6 1458 aa31.29■■■□□ 2.6
NEK6-214ENST00000545174 PRG4Q92954 1404 aaPredicted RBP31.29■■■□□ 2.6
NEK6-214ENST00000545174 GCC2Q8IWJ2 1684 aa31.27■■■□□ 2.6
NEK6-214ENST00000545174 MAGI1Q96QZ7 1491 aaPredicted RBP31.27■■■□□ 2.6
NEK6-214ENST00000545174 SYNJ2O15056 1496 aa31.26■■■□□ 2.59
NEK6-214ENST00000545174 JPH4Q96JJ6 628 aa31.25■■■□□ 2.59
NEK6-214ENST00000545174 DAPK1P53355 1430 aa31.24■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms