RNA–Protein interactions for RNA: ENST00000544868.2

MALAT1-203, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 480 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-203ENST00000544868 CHMP7Q8WUX9 453 aaPredicted RBP16.3■□□□□ 0.2
MALAT1-203ENST00000544868 ABCC10Q5T3U5 1492 aa16.29■□□□□ 0.2
MALAT1-203ENST00000544868 HOXD11P31277 338 aaPredicted RBP16.28■□□□□ 0.2
MALAT1-203ENST00000544868 PRDM2Q13029 1718 aa16.25■□□□□ 0.19
MALAT1-203ENST00000544868 DIP2BQ9P265 1576 aa16.23■□□□□ 0.19
MALAT1-203ENST00000544868 TSPOAP1O95153 1857 aa16.2■□□□□ 0.18
MALAT1-203ENST00000544868 ABCC8Q09428 1581 aa16.19■□□□□ 0.18
MALAT1-203ENST00000544868 MAGI1Q96QZ7 1491 aaPredicted RBP16.19■□□□□ 0.18
MALAT1-203ENST00000544868 DNMBPQ6XZF7 1577 aa16.17■□□□□ 0.18
MALAT1-203ENST00000544868 WIZO95785 1651 aa16.14■□□□□ 0.17
MALAT1-203ENST00000544868 TDRD9Q8NDG6 1382 aaKnown RBP16.13■□□□□ 0.17
MALAT1-203ENST00000544868 MAPKBP1O60336 1514 aa16.11■□□□□ 0.17
MALAT1-203ENST00000544868 POLA1P09884 1462 aaPredicted RBP16.1■□□□□ 0.17
MALAT1-203ENST00000544868 CEP170Q5SW79 1584 aa16.07■□□□□ 0.16
MALAT1-203ENST00000544868 WDR97A6NE52 1622 aa16.06■□□□□ 0.16
MALAT1-203ENST00000544868 TOP2BQ02880 1626 aa16.05■□□□□ 0.16
MALAT1-203ENST00000544868 RAD54L2Q9Y4B4 1467 aa16.05■□□□□ 0.16
MALAT1-203ENST00000544868 CERKQ8TCT0 537 aa16.04■□□□□ 0.16
MALAT1-203ENST00000544868 GRIN2BQ13224 1484 aa16.02■□□□□ 0.15
MALAT1-203ENST00000544868 SLC4A1APQ9BWU0 796 aaKnown RBP16■□□□□ 0.15
MALAT1-203ENST00000544868 NPM1P06748 294 aaKnown RBP eCLIP15.99■□□□□ 0.15not detected■□□□□ 8.9
MALAT1-203ENST00000544868 SOGA1O94964 1423 aa15.96■□□□□ 0.15
MALAT1-203ENST00000544868 SHROOM2Q13796 1616 aa15.94■□□□□ 0.14
MALAT1-203ENST00000544868 DCAF8L1A6NGE4 600 aa15.92■□□□□ 0.14
MALAT1-203ENST00000544868 PPRC1Q5VV67 1664 aaKnown RBP15.89■□□□□ 0.13
MALAT1-203ENST00000544868 COL17A1Q9UMD9 1497 aaPredicted RBP15.88■□□□□ 0.13
MALAT1-203ENST00000544868 PBRM1Q86U86 1689 aa15.88■□□□□ 0.13
MALAT1-203ENST00000544868 PCF11O94913 1555 aaKnown RBP15.87■□□□□ 0.13
MALAT1-203ENST00000544868 ADCY10Q96PN6 1610 aa15.84■□□□□ 0.13
MALAT1-203ENST00000544868 NUP160Q12769 1436 aa15.83■□□□□ 0.12
MALAT1-203ENST00000544868 GRIN2AQ12879 1464 aa15.83■□□□□ 0.12
MALAT1-203ENST00000544868 TOP2AP11388 1531 aaKnown RBP15.83■□□□□ 0.12
MALAT1-203ENST00000544868 PRG4Q92954 1404 aaPredicted RBP15.79■□□□□ 0.12
MALAT1-203ENST00000544868 FGD5Q6ZNL6 1462 aa15.78■□□□□ 0.12
MALAT1-203ENST00000544868 PTPRMP28827 1452 aa15.77■□□□□ 0.11
MALAT1-203ENST00000544868 GLI2P10070 1586 aa15.71■□□□□ 0.11
MALAT1-203ENST00000544868 KIF21BO75037 1637 aa15.69■□□□□ 0.1
MALAT1-203ENST00000544868 HSPA2P54652 639 aa15.67■□□□□ 0.1
MALAT1-203ENST00000544868 POTEHQ6S545 545 aa15.66■□□□□ 0.1
MALAT1-203ENST00000544868 TEX14Q8IWB6 1497 aa15.65■□□□□ 0.1
MALAT1-203ENST00000544868 CCDC88BA6NC98 1476 aa15.64■□□□□ 0.09
MALAT1-203ENST00000544868 ADAMTSL3P82987 1691 aa15.63■□□□□ 0.09
MALAT1-203ENST00000544868 ADAMTS12P58397 1594 aa15.63■□□□□ 0.09
MALAT1-203ENST00000544868 ABCA5Q8WWZ7 1642 aa15.63■□□□□ 0.09
MALAT1-203ENST00000544868 JPH4Q96JJ6 628 aa15.61■□□□□ 0.09
MALAT1-203ENST00000544868 MAP3K4Q9Y6R4 1608 aa15.59■□□□□ 0.09
MALAT1-203ENST00000544868 ASXL2Q76L83 1435 aa15.58■□□□□ 0.08
MALAT1-203ENST00000544868 PLB1Q6P1J6 1458 aa15.58■□□□□ 0.08
MALAT1-203ENST00000544868 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.55■□□□□ 0.08not detected■□□□□ 9.1
MALAT1-203ENST00000544868 EHMT2Q96KQ7 1210 aa15.54■□□□□ 0.08
MALAT1-203ENST00000544868 MED1Q15648 1581 aaPredicted RBP15.52■□□□□ 0.07
MALAT1-203ENST00000544868 MADDQ8WXG6 1647 aa15.51■□□□□ 0.07
MALAT1-203ENST00000544868 SLC4A2P04920 1241 aa15.51■□□□□ 0.07
MALAT1-203ENST00000544868 CUX1P39880 1505 aa15.5■□□□□ 0.07
MALAT1-203ENST00000544868 ABCA10Q8WWZ4 1543 aa15.49■□□□□ 0.07
MALAT1-203ENST00000544868 KIAA0586Q9BVV6 1533 aa15.49■□□□□ 0.07
MALAT1-203ENST00000544868 FHAD1B1AJZ9 1412 aa15.49■□□□□ 0.07
MALAT1-203ENST00000544868 EPRSP07814 1512 aaKnown RBP15.48■□□□□ 0.07
MALAT1-203ENST00000544868 ABCC2Q92887 1545 aa15.48■□□□□ 0.07
MALAT1-203ENST00000544868 FOXD4L1Q9NU39 408 aa15.47■□□□□ 0.07
MALAT1-203ENST00000544868 RUSC2Q8N2Y8 1516 aa15.46■□□□□ 0.07
MALAT1-203ENST00000544868 BCORL1Q5H9F3 1711 aa15.44■□□□□ 0.06
MALAT1-203ENST00000544868 CUL7Q14999 1698 aa15.42■□□□□ 0.06
MALAT1-203ENST00000544868 IQSEC2Q5JU85 1478 aa15.42■□□□□ 0.06
MALAT1-203ENST00000544868 RIMS1Q86UR5 1692 aaKnown RBP15.41■□□□□ 0.06
MALAT1-203ENST00000544868 ZBTB22O15209 634 aa15.37■□□□□ 0.05
MALAT1-203ENST00000544868 RNF39Q9H2S5 420 aa15.37■□□□□ 0.05
MALAT1-203ENST00000544868 YEATS2Q9ULM3 1422 aa15.35■□□□□ 0.05
MALAT1-203ENST00000544868 CSRNP3Q8WYN3 585 aa15.34■□□□□ 0.05
MALAT1-203ENST00000544868 LTBP4Q8N2S1 1624 aa15.33■□□□□ 0.04
MALAT1-203ENST00000544868 PTPRGP23470 1445 aa15.33■□□□□ 0.04
MALAT1-203ENST00000544868 STRCQ7RTU9 1775 aa15.32■□□□□ 0.04
MALAT1-203ENST00000544868 ARID4BQ4LE39 1312 aaPredicted RBP15.3■□□□□ 0.04
MALAT1-203ENST00000544868 MAGI3Q5TCQ9 1506 aa15.3■□□□□ 0.04
MALAT1-203ENST00000544868 CFAP43Q8NDM7 1665 aa15.29■□□□□ 0.04
MALAT1-203ENST00000544868 TTBK1Q5TCY1 1321 aaPredicted RBP15.29■□□□□ 0.04
MALAT1-203ENST00000544868 UBAP1LF5GYI3 381 aa15.27■□□□□ 0.04
MALAT1-203ENST00000544868 ERICH3Q5RHP9 1530 aa15.27■□□□□ 0.03
MALAT1-203ENST00000544868 MYCNP04198 464 aaPredicted RBP15.26■□□□□ 0.03
MALAT1-203ENST00000544868 UHRF1BP1LA0JNW5 1464 aa15.26■□□□□ 0.03
MALAT1-203ENST00000544868 U3KPZ7 1027 aaPredicted RBP15.25■□□□□ 0.03
MALAT1-203ENST00000544868 CD109Q6YHK3 1445 aa15.24■□□□□ 0.03
MALAT1-203ENST00000544868 PTPRTO14522 1441 aa15.22■□□□□ 0.03
MALAT1-203ENST00000544868 ARAP3Q8WWN8 1544 aa15.22■□□□□ 0.03
MALAT1-203ENST00000544868 PREX1Q8TCU6 1659 aa15.22■□□□□ 0.03
MALAT1-203ENST00000544868 KDM5BQ9UGL1 1544 aa15.21■□□□□ 0.03
MALAT1-203ENST00000544868 HSPA1LP34931 641 aa15.2■□□□□ 0.02
MALAT1-203ENST00000544868 ZCCHC11Q5TAX3 1644 aaKnown RBP15.19■□□□□ 0.02
MALAT1-203ENST00000544868 WDR7Q9Y4E6 1490 aa15.18■□□□□ 0.02
MALAT1-203ENST00000544868 TNIKQ9UKE5 1360 aa15.17■□□□□ 0.02
MALAT1-203ENST00000544868 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.17■□□□□ 0.02
MALAT1-203ENST00000544868 HNRNPUL2Q1KMD3 747 aaKnown RBP15.17■□□□□ 0.02
MALAT1-203ENST00000544868 UACAQ9BZF9 1416 aa15.17■□□□□ 0.02
MALAT1-203ENST00000544868 C1QBPQ07021 282 aaKnown RBP15.12■□□□□ 0.01
MALAT1-203ENST00000544868 WRNQ14191 1432 aaPredicted RBP eCLIP15.11■□□□□ 0.01
MALAT1-203ENST00000544868 TTC37Q6PGP7 1564 aa15.11■□□□□ 0.01
MALAT1-203ENST00000544868 SRCAPQ6ZRS2 3230 aa15.09■□□□□ 0.01
MALAT1-203ENST00000544868 SAMD1Q6SPF0 538 aaPredicted RBP15.09■□□□□ 0.01
MALAT1-203ENST00000544868 FER1L4A9Z1Z3 1794 aa15.08■□□□□ 0
MALAT1-203ENST00000544868 CARMIL2Q6F5E8 1435 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms