RNA–Protein interactions for RNA: ENST00000543772.2

PSMC1-202, Transcript of proteasome 26S subunit, ATPase 1, humanhuman

TSL 2 BASIC

Gene PSMC1, Length 1,389 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC1-202ENST00000543772 AKT1S1Q96B36 256 aa14.84□□□□□ -0.03
PSMC1-202ENST00000543772 MKRN4PQ13434 485 aaPredicted RBP14.83□□□□□ -0.04
PSMC1-202ENST00000543772 FBLN2P98095 1184 aa14.81□□□□□ -0.04
PSMC1-202ENST00000543772 PRDM2Q13029 1718 aa14.75□□□□□ -0.05
PSMC1-202ENST00000543772 RIMBP3CA6NJZ7 1639 aa14.73□□□□□ -0.05
PSMC1-202ENST00000543772 RIMBP3BA6NNM3 1639 aa14.73□□□□□ -0.05
PSMC1-202ENST00000543772 RIMBP3Q9UFD9 1639 aa14.73□□□□□ -0.05
PSMC1-202ENST00000543772 ZNF608Q9ULD9 1512 aaPredicted RBP14.73□□□□□ -0.05
PSMC1-202ENST00000543772 IFT140Q96RY7 1462 aa14.71□□□□□ -0.05
PSMC1-202ENST00000543772 SPDYE2BA6NHP3 402 aa14.7□□□□□ -0.06
PSMC1-202ENST00000543772 SPDYE6P0CI01 402 aa14.7□□□□□ -0.06
PSMC1-202ENST00000543772 SPDYE2Q495Y8 402 aa14.7□□□□□ -0.06
PSMC1-202ENST00000543772 CCDC88BA6NC98 1476 aa14.69□□□□□ -0.06
PSMC1-202ENST00000543772 REM2Q8IYK8 340 aaPredicted RBP14.68□□□□□ -0.06
PSMC1-202ENST00000543772 TOPBP1Q92547 1522 aa14.68□□□□□ -0.06
PSMC1-202ENST00000543772 ARHGEF11O15085 1522 aa14.66□□□□□ -0.06
PSMC1-202ENST00000543772 PIP4P2Q8N4L2 257 aa14.65□□□□□ -0.06
PSMC1-202ENST00000543772 EIF4G3O43432 1585 aaKnown RBP14.64□□□□□ -0.07
PSMC1-202ENST00000543772 DNMBPQ6XZF7 1577 aa14.6□□□□□ -0.07
PSMC1-202ENST00000543772 HAX1O00165 279 aa14.6□□□□□ -0.07
PSMC1-202ENST00000543772 ABCC8Q09428 1581 aa14.59□□□□□ -0.07
PSMC1-202ENST00000543772 SSUH2Q9Y2M2 353 aa14.58□□□□□ -0.08
PSMC1-202ENST00000543772 TARBP1Q13395 1621 aaKnown RBP14.57□□□□□ -0.08
PSMC1-202ENST00000543772 CHD1O14646 1710 aa14.56□□□□□ -0.08
PSMC1-202ENST00000543772 AQRO60306 1485 aaKnown RBP eCLIP14.56□□□□□ -0.082e-6■■□□□ 14.2
PSMC1-202ENST00000543772 CYB5RLQ6IPT4 315 aa14.54□□□□□ -0.08
PSMC1-202ENST00000543772 PITPNM1O00562 1244 aa14.53□□□□□ -0.08
PSMC1-202ENST00000543772 ARAP1Q96P48 1450 aa14.52□□□□□ -0.09
PSMC1-202ENST00000543772 POLA1P09884 1462 aaPredicted RBP14.51□□□□□ -0.09
PSMC1-202ENST00000543772 ZNF692Q9BU19 519 aaPredicted RBP14.49□□□□□ -0.09
PSMC1-202ENST00000543772 RAD54L2Q9Y4B4 1467 aa14.47□□□□□ -0.09
PSMC1-202ENST00000543772 FXR2P51116 673 aaKnown RBP eCLIP14.46□□□□□ -0.1
PSMC1-202ENST00000543772 TDRD9Q8NDG6 1382 aaKnown RBP14.44□□□□□ -0.1
PSMC1-202ENST00000543772 SOGA1O94964 1423 aa14.43□□□□□ -0.1
PSMC1-202ENST00000543772 SNAPC4Q5SXM2 1469 aa14.42□□□□□ -0.1
PSMC1-202ENST00000543772 CLASP1Q7Z460 1538 aa14.4□□□□□ -0.1
PSMC1-202ENST00000543772 FGD5Q6ZNL6 1462 aa14.4□□□□□ -0.1
PSMC1-202ENST00000543772 WDR97A6NE52 1622 aa14.37□□□□□ -0.11
PSMC1-202ENST00000543772 CUX1P39880 1505 aa14.36□□□□□ -0.11
PSMC1-202ENST00000543772 SPDYE1Q8NFV5 336 aaPredicted RBP14.35□□□□□ -0.11
PSMC1-202ENST00000543772 MAGI1Q96QZ7 1491 aaPredicted RBP14.35□□□□□ -0.11
PSMC1-202ENST00000543772 SYNJ1O43426 1573 aa14.34□□□□□ -0.11
PSMC1-202ENST00000543772 CHMP7Q8WUX9 453 aaPredicted RBP14.34□□□□□ -0.11
PSMC1-202ENST00000543772 GRIN2BQ13224 1484 aa14.33□□□□□ -0.12
PSMC1-202ENST00000543772 SYNJ2O15056 1496 aa14.3□□□□□ -0.12
PSMC1-202ENST00000543772 EVX2Q03828 476 aa14.3□□□□□ -0.12
PSMC1-202ENST00000543772 PBRM1Q86U86 1689 aa14.27□□□□□ -0.12
PSMC1-202ENST00000543772 GAPVD1Q14C86 1478 aa14.25□□□□□ -0.13
PSMC1-202ENST00000543772 CLEC11AQ9Y240 323 aa14.23□□□□□ -0.13
PSMC1-202ENST00000543772 ABCA5Q8WWZ7 1642 aa14.22□□□□□ -0.13
PSMC1-202ENST00000543772 ABCA10Q8WWZ4 1543 aa14.21□□□□□ -0.13
PSMC1-202ENST00000543772 ERCC6L2Q5T890 1561 aa14.18□□□□□ -0.14
PSMC1-202ENST00000543772 WRNQ14191 1432 aaPredicted RBP eCLIP14.18□□□□□ -0.14
PSMC1-202ENST00000543772 SPDYE4A6NLX3 237 aa14.17□□□□□ -0.14
PSMC1-202ENST00000543772 GRIN2AQ12879 1464 aa14.16□□□□□ -0.14
PSMC1-202ENST00000543772 ADAMTS12P58397 1594 aa14.13□□□□□ -0.15
PSMC1-202ENST00000543772 CEP170Q5SW79 1584 aa14.13□□□□□ -0.15
PSMC1-202ENST00000543772 PRKAR2AP13861 404 aaKnown RBP14.11□□□□□ -0.15
PSMC1-202ENST00000543772 NUP160Q12769 1436 aa14.11□□□□□ -0.15
PSMC1-202ENST00000543772 TOP2BQ02880 1626 aa14.08□□□□□ -0.16
PSMC1-202ENST00000543772 SHROOM2Q13796 1616 aa14.08□□□□□ -0.16
PSMC1-202ENST00000543772 PRR29P0C7W0 189 aa14.07□□□□□ -0.16
PSMC1-202ENST00000543772 BIVM-ERCC5R4GMW8 1640 aa14.06□□□□□ -0.16
PSMC1-202ENST00000543772 FHAD1B1AJZ9 1412 aa14.06□□□□□ -0.16
PSMC1-202ENST00000543772 C19orf67A6NJJ6 358 aa14.02□□□□□ -0.17
PSMC1-202ENST00000543772 LHX8Q68G74 356 aa14.02□□□□□ -0.17
PSMC1-202ENST00000543772 ERICH3Q5RHP9 1530 aa14.02□□□□□ -0.17
PSMC1-202ENST00000543772 PROM2Q8N271 834 aa14□□□□□ -0.17
PSMC1-202ENST00000543772 KIF13AQ9H1H9 1805 aa13.99□□□□□ -0.17
PSMC1-202ENST00000543772 CHADLQ6NUI6 762 aa13.99□□□□□ -0.17
PSMC1-202ENST00000543772 PRG4Q92954 1404 aaPredicted RBP13.99□□□□□ -0.17
PSMC1-202ENST00000543772 GABBR2O75899 941 aa13.97□□□□□ -0.17
PSMC1-202ENST00000543772 STAG3Q9UJ98 1225 aa13.96□□□□□ -0.17
PSMC1-202ENST00000543772 RUSC2Q8N2Y8 1516 aa13.94□□□□□ -0.18
PSMC1-202ENST00000543772 JPH4Q96JJ6 628 aa13.94□□□□□ -0.18
PSMC1-202ENST00000543772 ABCC10Q5T3U5 1492 aa13.89□□□□□ -0.19
PSMC1-202ENST00000543772 FAM69CQ0P6D2 419 aa13.88□□□□□ -0.19
PSMC1-202ENST00000543772 MAPKBP1O60336 1514 aa13.88□□□□□ -0.19
PSMC1-202ENST00000543772 ADCY10Q96PN6 1610 aa13.87□□□□□ -0.19
PSMC1-202ENST00000543772 DIP2BQ9P265 1576 aa13.86□□□□□ -0.19
PSMC1-202ENST00000543772 IGF1RP08069 1367 aa13.86□□□□□ -0.19
PSMC1-202ENST00000543772 CREBZFQ9NS37 354 aa13.85□□□□□ -0.19
PSMC1-202ENST00000543772 KIF27Q86VH2 1401 aa13.85□□□□□ -0.19
PSMC1-202ENST00000543772 NPM1P06748 294 aaKnown RBP eCLIP13.84□□□□□ -0.19
PSMC1-202ENST00000543772 FAM9AQ8IZU1 332 aaPredicted RBP13.84□□□□□ -0.19
PSMC1-202ENST00000543772 FARP1Q9Y4F1 1045 aaPredicted RBP13.84□□□□□ -0.19
PSMC1-202ENST00000543772 KIAA0586Q9BVV6 1533 aa13.82□□□□□ -0.2
PSMC1-202ENST00000543772 KDM6BO15054 1643 aa13.79□□□□□ -0.2
PSMC1-202ENST00000543772 EEA1Q15075 1411 aa13.79□□□□□ -0.2
PSMC1-202ENST00000543772 CUL7Q14999 1698 aa13.78□□□□□ -0.2
PSMC1-202ENST00000543772 TSPOAP1O95153 1857 aa13.77□□□□□ -0.2
PSMC1-202ENST00000543772 KDM4FA0A1W2PPD8 638 aa13.75□□□□□ -0.21
PSMC1-202ENST00000543772 PTPRGP23470 1445 aa13.73□□□□□ -0.21
PSMC1-202ENST00000543772 TTBK1Q5TCY1 1321 aaPredicted RBP13.72□□□□□ -0.21
PSMC1-202ENST00000543772 CARMIL1Q5VZK9 1371 aa13.72□□□□□ -0.21
PSMC1-202ENST00000543772 PRXQ9BXM0 1461 aa13.72□□□□□ -0.21
PSMC1-202ENST00000543772 LOC105371045A0A1W2PR82 267 aa13.71□□□□□ -0.22
PSMC1-202ENST00000543772 ABCC2Q92887 1545 aa13.7□□□□□ -0.22
PSMC1-202ENST00000543772 MNX1P50219 401 aaPredicted RBP13.7□□□□□ -0.22
PSMC1-202ENST00000543772 CD44P16070 742 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms