RNA–Protein interactions for RNA: ENST00000543772.2

PSMC1-202, Transcript of proteasome 26S subunit, ATPase 1, humanhuman

TSL 2 BASIC

Gene PSMC1, Length 1,389 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC1-202ENST00000543772 AEBP2Q6ZN18 517 aaPredicted RBP26.77■■□□□ 1.88
PSMC1-202ENST00000543772 CHIC1Q5VXU3 224 aa25.63■■□□□ 1.69
PSMC1-202ENST00000543772 SENP3Q9H4L4 574 aaPredicted RBP22.9■■□□□ 1.26
PSMC1-202ENST00000543772 PHF23Q9BUL5 403 aaPredicted RBP22.5■■□□□ 1.19
PSMC1-202ENST00000543772 FOXD1Q16676 465 aa21.39■■□□□ 1.02
PSMC1-202ENST00000543772 POTEDQ86YR6 584 aa20.91■□□□□ 0.94
PSMC1-202ENST00000543772 PLPPR3Q6T4P5 718 aa20.54■□□□□ 0.88
PSMC1-202ENST00000543772 MSH5O43196 834 aa20.33■□□□□ 0.84
PSMC1-202ENST00000543772 PPP6R1Q9UPN7 881 aa20■□□□□ 0.79
PSMC1-202ENST00000543772 ADRA2BP18089 450 aa19.9■□□□□ 0.78
PSMC1-202ENST00000543772 PIAS4Q8N2W9 510 aaPredicted RBP19.85■□□□□ 0.77
PSMC1-202ENST00000543772 NISCHQ9Y2I1 1504 aa19.79■□□□□ 0.76
PSMC1-202ENST00000543772 MAPK8IP2Q13387 824 aaPredicted RBP18.2■□□□□ 0.5
PSMC1-202ENST00000543772 SCAF1Q9H7N4 1312 aaKnown RBP18.18■□□□□ 0.5
PSMC1-202ENST00000543772 DMRT2Q9Y5R5 561 aa18.12■□□□□ 0.49
PSMC1-202ENST00000543772 ABCC9O60706 1549 aa18.07■□□□□ 0.48
PSMC1-202ENST00000543772 PPP4R3CPQ6ZMV5 832 aa18.04■□□□□ 0.48
PSMC1-202ENST00000543772 CCDC180Q9P1Z9 1646 aa17.85■□□□□ 0.45
PSMC1-202ENST00000543772 CACNB1Q02641 598 aaPredicted RBP17.83■□□□□ 0.45
PSMC1-202ENST00000543772 CNKSR2Q8WXI2 1034 aa17.66■□□□□ 0.42
PSMC1-202ENST00000543772 HOXD11P31277 338 aaPredicted RBP17.56■□□□□ 0.4
PSMC1-202ENST00000543772 RNF216Q9NWF9 866 aaPredicted RBP17.45■□□□□ 0.38
PSMC1-202ENST00000543772 DCAF8L1A6NGE4 600 aa17.37■□□□□ 0.37
PSMC1-202ENST00000543772 NCBP3Q53F19 620 aaKnown RBP17.37■□□□□ 0.37
PSMC1-202ENST00000543772 RNF39Q9H2S5 420 aa17.24■□□□□ 0.35
PSMC1-202ENST00000543772 NPM3O75607 178 aaKnown RBP17.18■□□□□ 0.34
PSMC1-202ENST00000543772 DNAJC5BQ9UF47 199 aa17.13■□□□□ 0.33
PSMC1-202ENST00000543772 RB1CC1Q8TDY2 1594 aa17.08■□□□□ 0.32
PSMC1-202ENST00000543772 KCNA4P22459 653 aa17.03■□□□□ 0.32
PSMC1-202ENST00000543772 C1QBPQ07021 282 aaKnown RBP16.99■□□□□ 0.31
PSMC1-202ENST00000543772 NACADO15069 1562 aa16.91■□□□□ 0.3
PSMC1-202ENST00000543772 DCAF8L2P0C7V8 631 aa16.78■□□□□ 0.28
PSMC1-202ENST00000543772 PABPN1Q86U42 306 aaKnown RBP eCLIP16.78■□□□□ 0.28
PSMC1-202ENST00000543772 UNC13AQ9UPW8 1703 aa16.72■□□□□ 0.27
PSMC1-202ENST00000543772 BICRAQ9NZM4 1560 aa16.62■□□□□ 0.25
PSMC1-202ENST00000543772 MYO15BQ96JP2 1530 aa16.6■□□□□ 0.25
PSMC1-202ENST00000543772 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.6■□□□□ 0.25
PSMC1-202ENST00000543772 ZCCHC6Q5VYS8 1495 aaKnown RBP16.38■□□□□ 0.21
PSMC1-202ENST00000543772 SLC4A2P04920 1241 aa16.38■□□□□ 0.21
PSMC1-202ENST00000543772 U3KPZ7 1027 aaPredicted RBP16.38■□□□□ 0.21
PSMC1-202ENST00000543772 SHROOM4Q9ULL8 1493 aa16.34■□□□□ 0.21
PSMC1-202ENST00000543772 DCAF1Q9Y4B6 1507 aa16.32■□□□□ 0.2
PSMC1-202ENST00000543772 CC2D2AQ9P2K1 1620 aa16.3■□□□□ 0.2
PSMC1-202ENST00000543772 SCRIBQ14160 1630 aa16.28■□□□□ 0.2
PSMC1-202ENST00000543772 CECR2Q9BXF3 1484 aa16.28■□□□□ 0.2
PSMC1-202ENST00000543772 POTEHQ6S545 545 aa16.26■□□□□ 0.19
PSMC1-202ENST00000543772 EIF4G1Q04637 1599 aaKnown RBP16.21■□□□□ 0.19
PSMC1-202ENST00000543772 SLC4A1APQ9BWU0 796 aaKnown RBP16.09■□□□□ 0.17
PSMC1-202ENST00000543772 SPINK5Q9NQ38 1064 aaPredicted RBP16.03■□□□□ 0.16
PSMC1-202ENST00000543772 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.94■□□□□ 0.14
PSMC1-202ENST00000543772 HNRNPUL2Q1KMD3 747 aaKnown RBP15.94■□□□□ 0.14
PSMC1-202ENST00000543772 CAPN15O75808 1086 aa15.92■□□□□ 0.14
PSMC1-202ENST00000543772 DSG3P32926 999 aa15.92■□□□□ 0.14
PSMC1-202ENST00000543772 MYCNP04198 464 aaPredicted RBP15.87■□□□□ 0.13
PSMC1-202ENST00000543772 APLP2Q06481 763 aa15.87■□□□□ 0.13
PSMC1-202ENST00000543772 SAMD1Q6SPF0 538 aaPredicted RBP15.87■□□□□ 0.13
PSMC1-202ENST00000543772 DNAJC5Q9H3Z4 198 aa15.84■□□□□ 0.13
PSMC1-202ENST00000543772 FOXD4L1Q9NU39 408 aa15.83■□□□□ 0.12
PSMC1-202ENST00000543772 ZNF219Q9P2Y4 722 aaPredicted RBP15.76■□□□□ 0.11
PSMC1-202ENST00000543772 ZBTB22O15209 634 aa15.72■□□□□ 0.11
PSMC1-202ENST00000543772 TRHP20396 242 aaPredicted RBP15.72■□□□□ 0.11
PSMC1-202ENST00000543772 CUX2O14529 1486 aa15.63■□□□□ 0.09
PSMC1-202ENST00000543772 NCAPD3P42695 1498 aa15.61■□□□□ 0.09
PSMC1-202ENST00000543772 ERCC6Q03468 1493 aa15.6■□□□□ 0.09
PSMC1-202ENST00000543772 ABCB7O75027 752 aa15.6■□□□□ 0.09
PSMC1-202ENST00000543772 ATAD2BQ9ULI0 1458 aa15.56■□□□□ 0.08
PSMC1-202ENST00000543772 SMARCA4P51532 1647 aa15.5■□□□□ 0.07
PSMC1-202ENST00000543772 ATF5Q9Y2D1 282 aaPredicted RBP15.49■□□□□ 0.07
PSMC1-202ENST00000543772 HMGXB3Q12766 1538 aa15.49■□□□□ 0.07
PSMC1-202ENST00000543772 SMARCA2P51531 1590 aa15.49■□□□□ 0.07
PSMC1-202ENST00000543772 NESP48681 1621 aa15.48■□□□□ 0.07
PSMC1-202ENST00000543772 POLA2Q14181 598 aa15.39■□□□□ 0.05
PSMC1-202ENST00000543772 BAZ1BQ9UIG0 1483 aaKnown RBP15.39■□□□□ 0.05
PSMC1-202ENST00000543772 BAZ1AQ9NRL2 1556 aaPredicted RBP15.37■□□□□ 0.05
PSMC1-202ENST00000543772 ATXN8OSP0DMR3 200 aa15.36■□□□□ 0.05
PSMC1-202ENST00000543772 THOC2Q8NI27 1593 aaKnown RBP15.35■□□□□ 0.05
PSMC1-202ENST00000543772 PEG3Q9GZU2 1588 aa15.33■□□□□ 0.04
PSMC1-202ENST00000543772 LAMC3Q9Y6N6 1575 aa15.3■□□□□ 0.04
PSMC1-202ENST00000543772 MROH2BQ7Z745 1585 aa15.27■□□□□ 0.03
PSMC1-202ENST00000543772 RBM42Q9BTD8 480 aaKnown RBP15.26■□□□□ 0.03
PSMC1-202ENST00000543772 KIF21AQ7Z4S6 1674 aa15.25■□□□□ 0.03
PSMC1-202ENST00000543772 PDS5BQ9NTI5 1447 aa15.21■□□□□ 0.03
PSMC1-202ENST00000543772 CHRDL2Q6WN34 429 aa15.16■□□□□ 0.02
PSMC1-202ENST00000543772 CSRNP3Q8WYN3 585 aa15.16■□□□□ 0.02
PSMC1-202ENST00000543772 CADPSQ9ULU8 1353 aa15.13■□□□□ 0.01
PSMC1-202ENST00000543772 ZBTB12Q9Y330 459 aaPredicted RBP15.13■□□□□ 0.01
PSMC1-202ENST00000543772 RSF1Q96T23 1441 aaPredicted RBP15.12■□□□□ 0.01
PSMC1-202ENST00000543772 MRC2Q9UBG0 1479 aa15.11■□□□□ 0.01
PSMC1-202ENST00000543772 TRIM41Q8WV44 630 aa15.09■□□□□ 0.01
PSMC1-202ENST00000543772 WDR62O43379 1518 aa15.09■□□□□ 0.01
PSMC1-202ENST00000543772 WIZO95785 1651 aa15.07■□□□□ 0
PSMC1-202ENST00000543772 CEP164Q9UPV0 1460 aa15□□□□□ -0.01
PSMC1-202ENST00000543772 SUPT5HO00267 1087 aaKnown RBP14.99□□□□□ -0.01
PSMC1-202ENST00000543772 EHMT2Q96KQ7 1210 aa14.98□□□□□ -0.01
PSMC1-202ENST00000543772 FANCD2Q9BXW9 1451 aa14.97□□□□□ -0.01
PSMC1-202ENST00000543772 SP7Q8TDD2 431 aaPredicted RBP14.95□□□□□ -0.02
PSMC1-202ENST00000543772 CFTRP13569 1480 aa14.92□□□□□ -0.02
PSMC1-202ENST00000543772 OSCARQ8IYS5 282 aa14.91□□□□□ -0.02
PSMC1-202ENST00000543772 URB2Q14146 1524 aaKnown RBP14.89□□□□□ -0.03
PSMC1-202ENST00000543772 TOP2AP11388 1531 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms