RNA–Protein interactions for RNA: ENST00000543155.5

COPS7A-215, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-215ENST00000543155 EFCAB5A4FU69 1503 aa27.61■■■□□ 2.01
COPS7A-215ENST00000543155 URB2Q14146 1524 aaKnown RBP27.61■■■□□ 2.01
COPS7A-215ENST00000543155 PCF11O94913 1555 aaKnown RBP27.59■■■□□ 2.01
COPS7A-215ENST00000543155 LRRC9Q6ZRR7 1453 aa27.58■■■□□ 2.01
COPS7A-215ENST00000543155 SCAF1Q9H7N4 1312 aaKnown RBP27.55■■■□□ 2
COPS7A-215ENST00000543155 ABCA5Q8WWZ7 1642 aa27.53■■■□□ 2
COPS7A-215ENST00000543155 PDS5BQ9NTI5 1447 aa27.5■■□□□ 1.99
COPS7A-215ENST00000543155 FYCO1Q9BQS8 1478 aa27.49■■□□□ 1.99
COPS7A-215ENST00000543155 ACIN1Q9UKV3 1341 aaKnown RBP27.47■■□□□ 1.99
COPS7A-215ENST00000543155 AQRO60306 1485 aaKnown RBP eCLIP27.47■■□□□ 1.99
COPS7A-215ENST00000543155 FHOD3Q2V2M9 1422 aa27.46■■□□□ 1.99
COPS7A-215ENST00000543155 KIF21AQ7Z4S6 1674 aa27.46■■□□□ 1.99
COPS7A-215ENST00000543155 CASKIN1Q8WXD9 1431 aa27.43■■□□□ 1.98
COPS7A-215ENST00000543155 CENPBP07199 599 aaPredicted RBP27.42■■□□□ 1.98
COPS7A-215ENST00000543155 PHLDB1Q86UU1 1377 aa27.4■■□□□ 1.98
COPS7A-215ENST00000543155 P3H3Q8IVL6 736 aa27.4■■□□□ 1.98
COPS7A-215ENST00000543155 GAPVD1Q14C86 1478 aa27.39■■□□□ 1.98
COPS7A-215ENST00000543155 NEUROD1Q13562 356 aa27.37■■□□□ 1.97
COPS7A-215ENST00000543155 SAMD9Q5K651 1589 aa27.36■■□□□ 1.97
COPS7A-215ENST00000543155 FMN1Q68DA7 1419 aa27.35■■□□□ 1.97
COPS7A-215ENST00000543155 ITGAEP38570 1179 aa27.35■■□□□ 1.97
COPS7A-215ENST00000543155 TDRD9Q8NDG6 1382 aaKnown RBP27.34■■□□□ 1.97
COPS7A-215ENST00000543155 RAB3GAP2Q9H2M9 1393 aa27.33■■□□□ 1.97
COPS7A-215ENST00000543155 TARBP1Q13395 1621 aaKnown RBP27.32■■□□□ 1.96
COPS7A-215ENST00000543155 SNAPC4Q5SXM2 1469 aa27.3■■□□□ 1.96
COPS7A-215ENST00000543155 SETD5Q9C0A6 1442 aa27.29■■□□□ 1.96
COPS7A-215ENST00000543155 ATP1B4Q9UN42 357 aaPredicted RBP27.28■■□□□ 1.96
COPS7A-215ENST00000543155 DNAJC5BQ9UF47 199 aa27.25■■□□□ 1.95
COPS7A-215ENST00000543155 MAPKBP1O60336 1514 aa27.24■■□□□ 1.95
COPS7A-215ENST00000543155 PBRM1Q86U86 1689 aa27.23■■□□□ 1.95
COPS7A-215ENST00000543155 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.23■■□□□ 1.95
COPS7A-215ENST00000543155 MIER1Q8N108 512 aa27.23■■□□□ 1.95
COPS7A-215ENST00000543155 THOC2Q8NI27 1593 aaKnown RBP27.21■■□□□ 1.95
COPS7A-215ENST00000543155 FAM50AQ14320 339 aaKnown RBP27.21■■□□□ 1.95
COPS7A-215ENST00000543155 LRRIQ1Q96JM4 1722 aa27.2■■□□□ 1.94
COPS7A-215ENST00000543155 GRIN2BQ13224 1484 aa27.16■■□□□ 1.94
COPS7A-215ENST00000543155 MRC2Q9UBG0 1479 aa27.13■■□□□ 1.93
COPS7A-215ENST00000543155 FGD6Q6ZV73 1430 aa27.12■■□□□ 1.93
COPS7A-215ENST00000543155 ADAMTS12P58397 1594 aa27.1■■□□□ 1.93
COPS7A-215ENST00000543155 MTUS2Q5JR59 1369 aa27.09■■□□□ 1.93
COPS7A-215ENST00000543155 EHBP1L1Q8N3D4 1523 aa27.07■■□□□ 1.92
COPS7A-215ENST00000543155 SUPT6HQ7KZ85 1726 aaKnown RBP27.07■■□□□ 1.92
COPS7A-215ENST00000543155 GTF3C3Q9Y5Q9 886 aa27.07■■□□□ 1.92
COPS7A-215ENST00000543155 IQGAP2Q13576 1575 aa27.04■■□□□ 1.92
COPS7A-215ENST00000543155 YTHDC1Q96MU7 727 aaKnown RBP27.04■■□□□ 1.92
COPS7A-215ENST00000543155 NCOA2Q15596 1464 aa27.02■■□□□ 1.92
COPS7A-215ENST00000543155 CCDC18Q5T9S5 1454 aa27.02■■□□□ 1.92
COPS7A-215ENST00000543155 HECW1Q76N89 1606 aa27■■□□□ 1.91
COPS7A-215ENST00000543155 MYOM3Q5VTT5 1437 aa26.99■■□□□ 1.91
COPS7A-215ENST00000543155 UGGT2Q9NYU1 1516 aa26.95■■□□□ 1.91
COPS7A-215ENST00000543155 ARHGEF11O15085 1522 aa26.95■■□□□ 1.9
COPS7A-215ENST00000543155 IFT140Q96RY7 1462 aa26.94■■□□□ 1.9
COPS7A-215ENST00000543155 WDR62O43379 1518 aa26.94■■□□□ 1.9
COPS7A-215ENST00000543155 PTPN23Q9H3S7 1636 aa26.92■■□□□ 1.9
COPS7A-215ENST00000543155 HFM1A2PYH4 1435 aa26.92■■□□□ 1.9
COPS7A-215ENST00000543155 TIMELESSQ9UNS1 1208 aa26.91■■□□□ 1.9
COPS7A-215ENST00000543155 MAGI3Q5TCQ9 1506 aa26.91■■□□□ 1.9
COPS7A-215ENST00000543155 PTPRKQ15262 1439 aa26.88■■□□□ 1.89
COPS7A-215ENST00000543155 PELP1Q8IZL8 1130 aaKnown RBP26.87■■□□□ 1.89
COPS7A-215ENST00000543155 SIN3AQ96ST3 1273 aa26.86■■□□□ 1.89
COPS7A-215ENST00000543155 EPRSP07814 1512 aaKnown RBP26.84■■□□□ 1.89
COPS7A-215ENST00000543155 ZNF608Q9ULD9 1512 aaPredicted RBP26.83■■□□□ 1.89
COPS7A-215ENST00000543155 UACAQ9BZF9 1416 aa26.83■■□□□ 1.88
COPS7A-215ENST00000543155 TCOF1Q13428 1488 aaKnown RBP26.82■■□□□ 1.88
COPS7A-215ENST00000543155 NAIPQ13075 1403 aa26.8■■□□□ 1.88
COPS7A-215ENST00000543155 GCC2Q8IWJ2 1684 aa26.77■■□□□ 1.88
COPS7A-215ENST00000543155 EIF4G3O43432 1585 aaKnown RBP26.77■■□□□ 1.88
COPS7A-215ENST00000543155 KIAA0556O60303 1618 aa26.76■■□□□ 1.87
COPS7A-215ENST00000543155 CDK13Q14004 1512 aaKnown RBP26.76■■□□□ 1.87
COPS7A-215ENST00000543155 KIAA0586Q9BVV6 1533 aa26.76■■□□□ 1.87
COPS7A-215ENST00000543155 MIA2Q96PC5 1412 aa26.71■■□□□ 1.87
COPS7A-215ENST00000543155 GRIN2AQ12879 1464 aa26.71■■□□□ 1.87
COPS7A-215ENST00000543155 DISP1Q96F81 1524 aa26.7■■□□□ 1.86
COPS7A-215ENST00000543155 AKNAQ7Z591 1439 aa26.7■■□□□ 1.86
COPS7A-215ENST00000543155 PPP1R15AO75807 674 aaPredicted RBP26.69■■□□□ 1.86
COPS7A-215ENST00000543155 TONSLQ96HA7 1378 aa26.66■■□□□ 1.86
COPS7A-215ENST00000543155 RAPGEF6Q8TEU7 1601 aa26.65■■□□□ 1.86
COPS7A-215ENST00000543155 ERCC6Q03468 1493 aa26.63■■□□□ 1.85
COPS7A-215ENST00000543155 MAGI1Q96QZ7 1491 aaPredicted RBP26.63■■□□□ 1.85
COPS7A-215ENST00000543155 NUP153P49790 1475 aaKnown RBP26.59■■□□□ 1.85
COPS7A-215ENST00000543155 RRP7BPQ9NSQ0 103 aa26.54■■□□□ 1.84
COPS7A-215ENST00000543155 KDM6BO15054 1643 aa26.54■■□□□ 1.84
COPS7A-215ENST00000543155 CEP170Q5SW79 1584 aa26.54■■□□□ 1.84
COPS7A-215ENST00000543155 SYNJ2O15056 1496 aa26.54■■□□□ 1.84
COPS7A-215ENST00000543155 DNMT1P26358 1616 aaKnown RBP26.52■■□□□ 1.84
COPS7A-215ENST00000543155 CHIC2Q9UKJ5 165 aa26.52■■□□□ 1.84
COPS7A-215ENST00000543155 ARID3CA6NKF2 412 aa26.51■■□□□ 1.84
COPS7A-215ENST00000543155 KDM5BQ9UGL1 1544 aa26.51■■□□□ 1.83
COPS7A-215ENST00000543155 DDX10Q13206 875 aaKnown RBP26.5■■□□□ 1.83
COPS7A-215ENST00000543155 DAPK1P53355 1430 aa26.48■■□□□ 1.83
COPS7A-215ENST00000543155 DENND4BO75064 1496 aaPredicted RBP26.48■■□□□ 1.83
COPS7A-215ENST00000543155 ROCK1Q13464 1354 aa26.47■■□□□ 1.83
COPS7A-215ENST00000543155 CDK11AQ9UQ88 783 aaPredicted RBP26.45■■□□□ 1.83
COPS7A-215ENST00000543155 ITSN2Q9NZM3 1697 aa26.44■■□□□ 1.82
COPS7A-215ENST00000543155 CHMP7Q8WUX9 453 aaPredicted RBP26.43■■□□□ 1.82
COPS7A-215ENST00000543155 ADCY10Q96PN6 1610 aa26.43■■□□□ 1.82
COPS7A-215ENST00000543155 TRIM52Q96A61 297 aa26.42■■□□□ 1.82
COPS7A-215ENST00000543155 NUP160Q12769 1436 aa26.41■■□□□ 1.82
COPS7A-215ENST00000543155 TROQ12816 1431 aaPredicted RBP26.41■■□□□ 1.82
COPS7A-215ENST00000543155 ABCC5O15440 1437 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms