RNA–Protein interactions for RNA: ENST00000541973.5

RAB6A-209, Transcript of RAB6A, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB6A, Length 1,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-209ENST00000541973 ATF5Q9Y2D1 282 aaPredicted RBP15.96■□□□□ 0.15
RAB6A-209ENST00000541973 POLA1P09884 1462 aaPredicted RBP15.95■□□□□ 0.14
RAB6A-209ENST00000541973 FGD5Q6ZNL6 1462 aa15.95■□□□□ 0.14
RAB6A-209ENST00000541973 SYNJ1O43426 1573 aa15.95■□□□□ 0.14
RAB6A-209ENST00000541973 IFT140Q96RY7 1462 aa15.94■□□□□ 0.14
RAB6A-209ENST00000541973 SOGA1O94964 1423 aa15.92■□□□□ 0.14
RAB6A-209ENST00000541973 TRIM41Q8WV44 630 aa15.88■□□□□ 0.13
RAB6A-209ENST00000541973 TARBP1Q13395 1621 aaKnown RBP15.87■□□□□ 0.13
RAB6A-209ENST00000541973 RAD54L2Q9Y4B4 1467 aa15.84■□□□□ 0.13
RAB6A-209ENST00000541973 WDR97A6NE52 1622 aa15.84■□□□□ 0.13
RAB6A-209ENST00000541973 RBM42Q9BTD8 480 aaKnown RBP15.84■□□□□ 0.13
RAB6A-209ENST00000541973 ABCA10Q8WWZ4 1543 aa15.83■□□□□ 0.12
RAB6A-209ENST00000541973 ZNF608Q9ULD9 1512 aaPredicted RBP15.78■□□□□ 0.12
RAB6A-209ENST00000541973 TDRD9Q8NDG6 1382 aaKnown RBP15.76■□□□□ 0.11
RAB6A-209ENST00000541973 EIF4G3O43432 1585 aaKnown RBP15.75■□□□□ 0.11
RAB6A-209ENST00000541973 AQRO60306 1485 aaKnown RBP eCLIP15.74■□□□□ 0.11
RAB6A-209ENST00000541973 GAPVD1Q14C86 1478 aa15.73■□□□□ 0.11
RAB6A-209ENST00000541973 KIF27Q86VH2 1401 aa15.73■□□□□ 0.11
RAB6A-209ENST00000541973 ABCA5Q8WWZ7 1642 aa15.72■□□□□ 0.11
RAB6A-209ENST00000541973 GRIN2BQ13224 1484 aa15.71■□□□□ 0.1
RAB6A-209ENST00000541973 ATXN8OSP0DMR3 200 aa15.69■□□□□ 0.1
RAB6A-209ENST00000541973 ZBTB12Q9Y330 459 aaPredicted RBP15.67■□□□□ 0.1
RAB6A-209ENST00000541973 ERICH3Q5RHP9 1530 aa15.67■□□□□ 0.1
RAB6A-209ENST00000541973 PBRM1Q86U86 1689 aa15.67■□□□□ 0.1
RAB6A-209ENST00000541973 MAGI1Q96QZ7 1491 aaPredicted RBP15.65■□□□□ 0.1
RAB6A-209ENST00000541973 EEA1Q15075 1411 aa15.63■□□□□ 0.09
RAB6A-209ENST00000541973 SNAPC4Q5SXM2 1469 aa15.6■□□□□ 0.09
RAB6A-209ENST00000541973 IGF1RP08069 1367 aa15.6■□□□□ 0.09
RAB6A-209ENST00000541973 FHAD1B1AJZ9 1412 aa15.58■□□□□ 0.08
RAB6A-209ENST00000541973 SYNJ2O15056 1496 aa15.58■□□□□ 0.08
RAB6A-209ENST00000541973 CUL7Q14999 1698 aa15.57■□□□□ 0.08
RAB6A-209ENST00000541973 CHMP7Q8WUX9 453 aaPredicted RBP15.57■□□□□ 0.08
RAB6A-209ENST00000541973 RUSC2Q8N2Y8 1516 aa15.55■□□□□ 0.08
RAB6A-209ENST00000541973 ADAMTS12P58397 1594 aa15.54■□□□□ 0.08
RAB6A-209ENST00000541973 FBLN2P98095 1184 aa15.54■□□□□ 0.08
RAB6A-209ENST00000541973 CARMIL1Q5VZK9 1371 aa15.53■□□□□ 0.08
RAB6A-209ENST00000541973 OSCARQ8IYS5 282 aa15.52■□□□□ 0.08
RAB6A-209ENST00000541973 AKT1S1Q96B36 256 aa15.51■□□□□ 0.07
RAB6A-209ENST00000541973 CHD1O14646 1710 aa15.51■□□□□ 0.07
RAB6A-209ENST00000541973 CHRDL2Q6WN34 429 aa15.5■□□□□ 0.07
RAB6A-209ENST00000541973 GRIN2AQ12879 1464 aa15.48■□□□□ 0.07
RAB6A-209ENST00000541973 RAPGEF2Q9Y4G8 1499 aa15.46■□□□□ 0.07
RAB6A-209ENST00000541973 FAM9AQ8IZU1 332 aaPredicted RBP15.46■□□□□ 0.07
RAB6A-209ENST00000541973 PRXQ9BXM0 1461 aa15.46■□□□□ 0.06
RAB6A-209ENST00000541973 NUP160Q12769 1436 aa15.41■□□□□ 0.06
RAB6A-209ENST00000541973 KIF21BO75037 1637 aa15.39■□□□□ 0.05
RAB6A-209ENST00000541973 CEP170Q5SW79 1584 aa15.36■□□□□ 0.05
RAB6A-209ENST00000541973 CLASP1Q7Z460 1538 aa15.35■□□□□ 0.05
RAB6A-209ENST00000541973 KIAA0586Q9BVV6 1533 aa15.35■□□□□ 0.05
RAB6A-209ENST00000541973 REM2Q8IYK8 340 aaPredicted RBP15.35■□□□□ 0.05
RAB6A-209ENST00000541973 GOLGA3Q08378 1498 aa15.33■□□□□ 0.04
RAB6A-209ENST00000541973 DNAJC5Q9H3Z4 198 aa15.32■□□□□ 0.04
RAB6A-209ENST00000541973 CTTNBP2Q8WZ74 1663 aa15.29■□□□□ 0.04
RAB6A-209ENST00000541973 JPH4Q96JJ6 628 aa15.29■□□□□ 0.04
RAB6A-209ENST00000541973 IQGAP2Q13576 1575 aa15.28■□□□□ 0.04
RAB6A-209ENST00000541973 UBTFP17480 764 aaKnown RBP15.28■□□□□ 0.04
RAB6A-209ENST00000541973 SHROOM2Q13796 1616 aa15.26■□□□□ 0.03
RAB6A-209ENST00000541973 MKRN4PQ13434 485 aaPredicted RBP15.25■□□□□ 0.03
RAB6A-209ENST00000541973 SPDYE2BA6NHP3 402 aa15.22■□□□□ 0.03
RAB6A-209ENST00000541973 SPDYE6P0CI01 402 aa15.22■□□□□ 0.03
RAB6A-209ENST00000541973 SPDYE2Q495Y8 402 aa15.22■□□□□ 0.03
RAB6A-209ENST00000541973 CARMIL2Q6F5E8 1435 aa15.21■□□□□ 0.03
RAB6A-209ENST00000541973 PRG4Q92954 1404 aaPredicted RBP15.21■□□□□ 0.03
RAB6A-209ENST00000541973 UGGT2Q9NYU1 1516 aa15.21■□□□□ 0.03
RAB6A-209ENST00000541973 ARHGEF11O15085 1522 aa15.19■□□□□ 0.02
RAB6A-209ENST00000541973 PITPNM1O00562 1244 aa15.19■□□□□ 0.02
RAB6A-209ENST00000541973 TNIKQ9UKE5 1360 aa15.18■□□□□ 0.02
RAB6A-209ENST00000541973 RIMBP3CA6NJZ7 1639 aa15.16■□□□□ 0.02
RAB6A-209ENST00000541973 RIMBP3BA6NNM3 1639 aa15.16■□□□□ 0.02
RAB6A-209ENST00000541973 RIMBP3Q9UFD9 1639 aa15.16■□□□□ 0.02
RAB6A-209ENST00000541973 PIP4P2Q8N4L2 257 aa15.14■□□□□ 0.01
RAB6A-209ENST00000541973 EFCAB5A4FU69 1503 aa15.12■□□□□ 0.01
RAB6A-209ENST00000541973 DISP1Q96F81 1524 aa15.12■□□□□ 0.01
RAB6A-209ENST00000541973 LOC105371045A0A1W2PR82 267 aa15.12■□□□□ 0.01
RAB6A-209ENST00000541973 FKBP8Q14318 412 aa15.12■□□□□ 0.01
RAB6A-209ENST00000541973 KIAA0556O60303 1618 aa15.11■□□□□ 0.01
RAB6A-209ENST00000541973 SAMD9Q5K651 1589 aa15.1■□□□□ 0.01
RAB6A-209ENST00000541973 ERCC6L2Q5T890 1561 aa15.1■□□□□ 0.01
RAB6A-209ENST00000541973 FXR2P51116 673 aaKnown RBP eCLIP15.09■□□□□ 0.01
RAB6A-209ENST00000541973 PTPRGP23470 1445 aa15.09■□□□□ 0.01
RAB6A-209ENST00000541973 RANGAP1P46060 587 aaPredicted RBP15.08■□□□□ 0
RAB6A-209ENST00000541973 ARAP1Q96P48 1450 aa15.07■□□□□ 0
RAB6A-209ENST00000541973 CYB5RLQ6IPT4 315 aa15.06■□□□□ 0
RAB6A-209ENST00000541973 SP7Q8TDD2 431 aaPredicted RBP15.05■□□□□ -0
RAB6A-209ENST00000541973 SSUH2Q9Y2M2 353 aa15.05■□□□□ -0
RAB6A-209ENST00000541973 CLIP1P30622 1438 aa15.05■□□□□ -0
RAB6A-209ENST00000541973 P3H3Q8IVL6 736 aa15.03■□□□□ -0
RAB6A-209ENST00000541973 ARHGAP35Q9NRY4 1499 aa15.02■□□□□ -0
RAB6A-209ENST00000541973 CEP162Q5TB80 1403 aa15.02■□□□□ -0
RAB6A-209ENST00000541973 FMN1Q68DA7 1419 aa15□□□□□ -0.01
RAB6A-209ENST00000541973 TTBK1Q5TCY1 1321 aaPredicted RBP14.99□□□□□ -0.01
RAB6A-209ENST00000541973 ZNF692Q9BU19 519 aaPredicted RBP14.99□□□□□ -0.01
RAB6A-209ENST00000541973 FHOD3Q2V2M9 1422 aa14.99□□□□□ -0.01
RAB6A-209ENST00000541973 UACAQ9BZF9 1416 aa14.98□□□□□ -0.01
RAB6A-209ENST00000541973 UHRF1BP1LA0JNW5 1464 aa14.96□□□□□ -0.01
RAB6A-209ENST00000541973 NPM1P06748 294 aaKnown RBP eCLIP14.96□□□□□ -0.01
RAB6A-209ENST00000541973 ABCC2Q92887 1545 aa14.94□□□□□ -0.02
RAB6A-209ENST00000541973 SPDYE1Q8NFV5 336 aaPredicted RBP14.93□□□□□ -0.02
RAB6A-209ENST00000541973 ABCA8O94911 1581 aa14.93□□□□□ -0.02
RAB6A-209ENST00000541973 PLB1Q6P1J6 1458 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms