RNA–Protein interactions for RNA: ENST00000541774.5

ERBB2-204, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5 BASIC

Gene ERBB2, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-204ENST00000541774 CCDC88BA6NC98 1476 aa14.84□□□□□ -0.03
ERBB2-204ENST00000541774 ANP32BQ92688 251 aaKnown RBP14.84□□□□□ -0.03
ERBB2-204ENST00000541774 PPP4R2Q9NY27 417 aa14.84□□□□□ -0.03
ERBB2-204ENST00000541774 FAM9BQ8IZU0 186 aa14.83□□□□□ -0.04
ERBB2-204ENST00000541774 HSP90AA1P07900 732 aaKnown RBP14.81□□□□□ -0.04
ERBB2-204ENST00000541774 TNNT2P45379 298 aaPredicted RBP14.81□□□□□ -0.04
ERBB2-204ENST00000541774 B4GALNT3Q6L9W6 998 aa14.81□□□□□ -0.04
ERBB2-204ENST00000541774 ABCC8Q09428 1581 aa14.81□□□□□ -0.04
ERBB2-204ENST00000541774 WRNQ14191 1432 aaPredicted RBP eCLIP14.8□□□□□ -0.04
ERBB2-204ENST00000541774 RSPH6AQ9H0K4 717 aa14.8□□□□□ -0.04
ERBB2-204ENST00000541774 UBE2Q2Q8WVN8 375 aa14.79□□□□□ -0.04
ERBB2-204ENST00000541774 FANCIQ9NVI1 1328 aa14.79□□□□□ -0.04
ERBB2-204ENST00000541774 ARID4BQ4LE39 1312 aaPredicted RBP14.78□□□□□ -0.04
ERBB2-204ENST00000541774 SOGA1O94964 1423 aa14.78□□□□□ -0.04
ERBB2-204ENST00000541774 DDRGK1Q96HY6 314 aa14.78□□□□□ -0.04
ERBB2-204ENST00000541774 A0A0U1RQG5 324 aaPredicted RBP14.77□□□□□ -0.05
ERBB2-204ENST00000541774 IL27Q8NEV9 243 aa14.76□□□□□ -0.05
ERBB2-204ENST00000541774 HSP90AA2PQ14568 343 aaPredicted RBP14.76□□□□□ -0.05
ERBB2-204ENST00000541774 TRIM44Q96DX7 344 aaPredicted RBP14.76□□□□□ -0.05
ERBB2-204ENST00000541774 HIRIP3Q9BW71 556 aaPredicted RBP14.71□□□□□ -0.05
ERBB2-204ENST00000541774 PNNQ9H307 717 aaKnown RBP14.7□□□□□ -0.06
ERBB2-204ENST00000541774 IPO9Q96P70 1041 aaKnown RBP14.68□□□□□ -0.06
ERBB2-204ENST00000541774 CDK11BP21127 795 aaKnown RBP14.68□□□□□ -0.06
ERBB2-204ENST00000541774 AMER1Q5JTC6 1135 aaPredicted RBP14.67□□□□□ -0.06
ERBB2-204ENST00000541774 ATAD2BQ9ULI0 1458 aa14.66□□□□□ -0.06
ERBB2-204ENST00000541774 SMARCA4P51532 1647 aa14.64□□□□□ -0.07
ERBB2-204ENST00000541774 MRS2Q9HD23 443 aa14.64□□□□□ -0.07
ERBB2-204ENST00000541774 NCLP19338 710 aaKnown RBP14.62□□□□□ -0.07
ERBB2-204ENST00000541774 UPF2Q9HAU5 1272 aaKnown RBP14.6□□□□□ -0.07
ERBB2-204ENST00000541774 USP35Q9P2H5 1018 aa14.59□□□□□ -0.07
ERBB2-204ENST00000541774 ZNF777Q9ULD5 760 aaPredicted RBP14.59□□□□□ -0.07
ERBB2-204ENST00000541774 CEP162Q5TB80 1403 aa14.59□□□□□ -0.07
ERBB2-204ENST00000541774 CLIP1P30622 1438 aa14.59□□□□□ -0.07
ERBB2-204ENST00000541774 DNAJC5BQ9UF47 199 aa14.59□□□□□ -0.07
ERBB2-204ENST00000541774 TOP2AP11388 1531 aaKnown RBP14.58□□□□□ -0.08
ERBB2-204ENST00000541774 RUSC2Q8N2Y8 1516 aa14.57□□□□□ -0.08
ERBB2-204ENST00000541774 L1TD1Q5T7N2 865 aaKnown RBP14.57□□□□□ -0.08
ERBB2-204ENST00000541774 MSH5O43196 834 aa14.56□□□□□ -0.08
ERBB2-204ENST00000541774 CHMP7Q8WUX9 453 aaPredicted RBP14.56□□□□□ -0.08
ERBB2-204ENST00000541774 GSE1Q14687 1217 aa14.55□□□□□ -0.08
ERBB2-204ENST00000541774 SMARCA2P51531 1590 aa14.55□□□□□ -0.08
ERBB2-204ENST00000541774 KCNH8Q96L42 1107 aa14.55□□□□□ -0.08
ERBB2-204ENST00000541774 ARID3AQ99856 593 aa14.53□□□□□ -0.08
ERBB2-204ENST00000541774 BECN1Q14457 450 aa14.53□□□□□ -0.08
ERBB2-204ENST00000541774 BRPF3Q9ULD4 1205 aa14.51□□□□□ -0.09
ERBB2-204ENST00000541774 TDRD9Q8NDG6 1382 aaKnown RBP14.51□□□□□ -0.09
ERBB2-204ENST00000541774 CHIC2Q9UKJ5 165 aa14.51□□□□□ -0.09
ERBB2-204ENST00000541774 CANXP27824 592 aaKnown RBP14.5□□□□□ -0.09
ERBB2-204ENST00000541774 KIF27Q86VH2 1401 aa14.5□□□□□ -0.09
ERBB2-204ENST00000541774 CUX2O14529 1486 aa14.5□□□□□ -0.09
ERBB2-204ENST00000541774 GOLGA3Q08378 1498 aa14.49□□□□□ -0.09
ERBB2-204ENST00000541774 TONSLQ96HA7 1378 aa14.49□□□□□ -0.09
ERBB2-204ENST00000541774 SENP3-EIF4A1A0A087X0R7 540 aa14.48□□□□□ -0.09
ERBB2-204ENST00000541774 CCER2I3L3R5 266 aa14.47□□□□□ -0.09
ERBB2-204ENST00000541774 ERCC6Q03468 1493 aa14.45□□□□□ -0.1
ERBB2-204ENST00000541774 CADPSQ9ULU8 1353 aa14.45□□□□□ -0.1
ERBB2-204ENST00000541774 ZNF326Q5BKZ1 582 aaKnown RBP14.45□□□□□ -0.1
ERBB2-204ENST00000541774 TNIKQ9UKE5 1360 aa14.44□□□□□ -0.1
ERBB2-204ENST00000541774 PAK3O75914 559 aaPredicted RBP14.44□□□□□ -0.1
ERBB2-204ENST00000541774 DNTTIP2Q5QJE6 756 aaKnown RBP14.44□□□□□ -0.1
ERBB2-204ENST00000541774 TMC1Q8TDI8 760 aa14.44□□□□□ -0.1
ERBB2-204ENST00000541774 ZMYND15Q9H091 742 aa14.44□□□□□ -0.1
ERBB2-204ENST00000541774 EEA1Q15075 1411 aa14.42□□□□□ -0.1
ERBB2-204ENST00000541774 CARMIL1Q5VZK9 1371 aa14.41□□□□□ -0.1
ERBB2-204ENST00000541774 EIF4G1Q04637 1599 aaKnown RBP14.41□□□□□ -0.1
ERBB2-204ENST00000541774 BICRAQ9NZM4 1560 aa14.4□□□□□ -0.1
ERBB2-204ENST00000541774 CEP164Q9UPV0 1460 aa14.4□□□□□ -0.1
ERBB2-204ENST00000541774 MSNP26038 577 aaKnown RBP14.39□□□□□ -0.11
ERBB2-204ENST00000541774 PLEKHG5O94827 1062 aa14.38□□□□□ -0.11
ERBB2-204ENST00000541774 GZF1Q9H116 711 aaPredicted RBP14.37□□□□□ -0.11
ERBB2-204ENST00000541774 KANK4Q5T7N3 995 aaPredicted RBP14.36□□□□□ -0.11
ERBB2-204ENST00000541774 TCERG1O14776 1098 aaKnown RBP14.35□□□□□ -0.11
ERBB2-204ENST00000541774 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.35□□□□□ -0.11
ERBB2-204ENST00000541774 PTMAP06454 111 aaKnown RBP14.35□□□□□ -0.11
ERBB2-204ENST00000541774 MTUS2Q5JR59 1369 aa14.34□□□□□ -0.11
ERBB2-204ENST00000541774 RGS3P49796 1198 aa14.34□□□□□ -0.11
ERBB2-204ENST00000541774 GOLGA6L3A6NEY3 463 aa14.34□□□□□ -0.11
ERBB2-204ENST00000541774 RAPGEF2Q9Y4G8 1499 aa14.32□□□□□ -0.12
ERBB2-204ENST00000541774 RRP7BPQ9NSQ0 103 aa14.32□□□□□ -0.12
ERBB2-204ENST00000541774 PDE4CQ08493 712 aa14.32□□□□□ -0.12
ERBB2-204ENST00000541774 NESP48681 1621 aa14.32□□□□□ -0.12
ERBB2-204ENST00000541774 FAM43AQ8N2R8 423 aa14.31□□□□□ -0.12
ERBB2-204ENST00000541774 GOLGA6L22H0YM25 854 aa14.31□□□□□ -0.12
ERBB2-204ENST00000541774 SLC4A3P48751 1232 aa14.31□□□□□ -0.12
ERBB2-204ENST00000541774 FRAT1Q92837 279 aaPredicted RBP14.3□□□□□ -0.12
ERBB2-204ENST00000541774 MYH16Q9H6N6 1097 aa14.3□□□□□ -0.12
ERBB2-204ENST00000541774 SLKQ9H2G2 1235 aaPredicted RBP14.29□□□□□ -0.12
ERBB2-204ENST00000541774 NCAPD3P42695 1498 aa14.29□□□□□ -0.12
ERBB2-204ENST00000541774 PDS5BQ9NTI5 1447 aa14.29□□□□□ -0.12
ERBB2-204ENST00000541774 FANCD2Q9BXW9 1451 aa14.28□□□□□ -0.12
ERBB2-204ENST00000541774 RRP9O43818 475 aaKnown RBP14.28□□□□□ -0.12
ERBB2-204ENST00000541774 NFKBIBQ15653 356 aa14.26□□□□□ -0.13
ERBB2-204ENST00000541774 SIN3AQ96ST3 1273 aa14.26□□□□□ -0.13
ERBB2-204ENST00000541774 EIF4G2P78344 907 aaKnown RBP eCLIP14.25□□□□□ -0.13
ERBB2-204ENST00000541774 RAD54L2Q9Y4B4 1467 aa14.25□□□□□ -0.13
ERBB2-204ENST00000541774 PDE4AP27815 886 aa14.25□□□□□ -0.13
ERBB2-204ENST00000541774 FAM13BQ9NYF5 915 aa14.25□□□□□ -0.13
ERBB2-204ENST00000541774 UNC13AQ9UPW8 1703 aa14.25□□□□□ -0.13
ERBB2-204ENST00000541774 SPRYD3Q8NCJ5 442 aa14.24□□□□□ -0.13
ERBB2-204ENST00000541774 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms