RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 DNAJC5BQ9UF47 199 aa19.83■□□□□ 0.76
BNIP3-202ENST00000540159 FHOD3Q2V2M9 1422 aa19.82■□□□□ 0.76
BNIP3-202ENST00000540159 PHLDB1Q86UU1 1377 aa19.81■□□□□ 0.76
BNIP3-202ENST00000540159 CC2D2AQ9P2K1 1620 aa19.78■□□□□ 0.76
BNIP3-202ENST00000540159 FANCD2Q9BXW9 1451 aa19.78■□□□□ 0.76
BNIP3-202ENST00000540159 ARID3CA6NKF2 412 aa19.77■□□□□ 0.76
BNIP3-202ENST00000540159 CLSPNQ9HAW4 1339 aa19.74■□□□□ 0.75
BNIP3-202ENST00000540159 DDX10Q13206 875 aaKnown RBP19.72■□□□□ 0.75
BNIP3-202ENST00000540159 TDRD9Q8NDG6 1382 aaKnown RBP19.71■□□□□ 0.75
BNIP3-202ENST00000540159 TIAM1Q13009 1591 aa19.7■□□□□ 0.74
BNIP3-202ENST00000540159 LRRC9Q6ZRR7 1453 aa19.7■□□□□ 0.74
BNIP3-202ENST00000540159 SETD5Q9C0A6 1442 aa19.66■□□□□ 0.74
BNIP3-202ENST00000540159 PCF11O94913 1555 aaKnown RBP19.65■□□□□ 0.74
BNIP3-202ENST00000540159 POLA1P09884 1462 aaPredicted RBP19.65■□□□□ 0.74
BNIP3-202ENST00000540159 MAPKBP1O60336 1514 aa19.62■□□□□ 0.73
BNIP3-202ENST00000540159 FHAD1B1AJZ9 1412 aa19.6■□□□□ 0.73
BNIP3-202ENST00000540159 TOPBP1Q92547 1522 aa19.6■□□□□ 0.73
BNIP3-202ENST00000540159 PRDM2Q13029 1718 aa19.6■□□□□ 0.73
BNIP3-202ENST00000540159 BCANQ96GW7 911 aa19.6■□□□□ 0.73
BNIP3-202ENST00000540159 CHIC2Q9UKJ5 165 aa19.6■□□□□ 0.73
BNIP3-202ENST00000540159 MTUS2Q5JR59 1369 aa19.56■□□□□ 0.72
BNIP3-202ENST00000540159 WDR97A6NE52 1622 aa19.56■□□□□ 0.72
BNIP3-202ENST00000540159 SUPT16HQ9Y5B9 1047 aaKnown RBP19.53■□□□□ 0.72
BNIP3-202ENST00000540159 RRP7BPQ9NSQ0 103 aa19.52■□□□□ 0.72
BNIP3-202ENST00000540159 DNMBPQ6XZF7 1577 aa19.51■□□□□ 0.71
BNIP3-202ENST00000540159 TRIM52Q96A61 297 aa19.5■□□□□ 0.71
BNIP3-202ENST00000540159 ABCA10Q8WWZ4 1543 aa19.49■□□□□ 0.71
BNIP3-202ENST00000540159 URB2Q14146 1524 aaKnown RBP19.48■□□□□ 0.71
BNIP3-202ENST00000540159 CASKIN1Q8WXD9 1431 aa19.44■□□□□ 0.7
BNIP3-202ENST00000540159 PTPRKQ15262 1439 aa19.43■□□□□ 0.7
BNIP3-202ENST00000540159 PPP1R15AO75807 674 aaPredicted RBP19.43■□□□□ 0.7
BNIP3-202ENST00000540159 TONSLQ96HA7 1378 aa19.42■□□□□ 0.7
BNIP3-202ENST00000540159 FGD6Q6ZV73 1430 aa19.42■□□□□ 0.7
BNIP3-202ENST00000540159 MAP3K1Q13233 1512 aa19.42■□□□□ 0.7
BNIP3-202ENST00000540159 FOXD1Q16676 465 aa19.41■□□□□ 0.7
BNIP3-202ENST00000540159 FYCO1Q9BQS8 1478 aa19.41■□□□□ 0.7
BNIP3-202ENST00000540159 CFAP43Q8NDM7 1665 aa19.4■□□□□ 0.7
BNIP3-202ENST00000540159 GAPVD1Q14C86 1478 aa19.4■□□□□ 0.7
BNIP3-202ENST00000540159 FMN1Q68DA7 1419 aa19.39■□□□□ 0.69
BNIP3-202ENST00000540159 CNGB1Q14028 1251 aaPredicted RBP19.37■□□□□ 0.69
BNIP3-202ENST00000540159 CCDC18Q5T9S5 1454 aa19.36■□□□□ 0.69
BNIP3-202ENST00000540159 FKBP8Q14318 412 aa19.36■□□□□ 0.69
BNIP3-202ENST00000540159 AQRO60306 1485 aaKnown RBP eCLIP19.34■□□□□ 0.697e-11■■■■■ 47.6
BNIP3-202ENST00000540159 SNAPC4Q5SXM2 1469 aa19.33■□□□□ 0.69
BNIP3-202ENST00000540159 ANP32CO43423 234 aa19.33■□□□□ 0.69
BNIP3-202ENST00000540159 NCOA2Q15596 1464 aa19.33■□□□□ 0.68
BNIP3-202ENST00000540159 CTTNBP2Q8WZ74 1663 aa19.32■□□□□ 0.68
BNIP3-202ENST00000540159 EFCAB5A4FU69 1503 aa19.32■□□□□ 0.68
BNIP3-202ENST00000540159 CUL7Q14999 1698 aa19.29■□□□□ 0.68
BNIP3-202ENST00000540159 PDS5BQ9NTI5 1447 aa19.28■□□□□ 0.68
BNIP3-202ENST00000540159 MYOM3Q5VTT5 1437 aa19.26■□□□□ 0.67
BNIP3-202ENST00000540159 FBLN2P98095 1184 aa19.26■□□□□ 0.67
BNIP3-202ENST00000540159 LRRIQ1Q96JM4 1722 aa19.26■□□□□ 0.67
BNIP3-202ENST00000540159 NAIPQ13075 1403 aa19.25■□□□□ 0.67
BNIP3-202ENST00000540159 KIF21AQ7Z4S6 1674 aa19.23■□□□□ 0.67
BNIP3-202ENST00000540159 ZNF644Q9H582 1327 aaPredicted RBP19.23■□□□□ 0.67
BNIP3-202ENST00000540159 MAGI3Q5TCQ9 1506 aa19.23■□□□□ 0.67
BNIP3-202ENST00000540159 CDK13Q14004 1512 aaKnown RBP19.23■□□□□ 0.67
BNIP3-202ENST00000540159 IRX6P78412 446 aaPredicted RBP19.22■□□□□ 0.67
BNIP3-202ENST00000540159 LAMC3Q9Y6N6 1575 aa19.22■□□□□ 0.67
BNIP3-202ENST00000540159 HFM1A2PYH4 1435 aa19.21■□□□□ 0.67
BNIP3-202ENST00000540159 UACAQ9BZF9 1416 aa19.21■□□□□ 0.67
BNIP3-202ENST00000540159 GRIN2BQ13224 1484 aa19.2■□□□□ 0.66
BNIP3-202ENST00000540159 ABCA5Q8WWZ7 1642 aa19.19■□□□□ 0.66
BNIP3-202ENST00000540159 PTPN23Q9H3S7 1636 aa19.19■□□□□ 0.66
BNIP3-202ENST00000540159 TSHZ2Q9NRE2 1034 aa19.19■□□□□ 0.66
BNIP3-202ENST00000540159 ZNF777Q9ULD5 760 aaPredicted RBP19.19■□□□□ 0.66
BNIP3-202ENST00000540159 SENP3-EIF4A1A0A087X0R7 540 aa19.18■□□□□ 0.66
BNIP3-202ENST00000540159 HSPA5P11021 654 aaKnown RBP19.18■□□□□ 0.66
BNIP3-202ENST00000540159 POLR3GLQ9BT43 218 aa19.17■□□□□ 0.66
BNIP3-202ENST00000540159 TIMELESSQ9UNS1 1208 aa19.17■□□□□ 0.66
BNIP3-202ENST00000540159 HNRNPUQ00839 825 aaKnown RBP eCLIP19.16■□□□□ 0.66
BNIP3-202ENST00000540159 ZNF326Q5BKZ1 582 aaKnown RBP19.16■□□□□ 0.66
BNIP3-202ENST00000540159 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.15■□□□□ 0.663e-6■■■■□ 26.4
BNIP3-202ENST00000540159 SAMD9Q5K651 1589 aa19.15■□□□□ 0.66
BNIP3-202ENST00000540159 NEFLP07196 543 aa19.14■□□□□ 0.66
BNIP3-202ENST00000540159 MPHOSPH9Q99550 1183 aa19.14■□□□□ 0.66
BNIP3-202ENST00000540159 L3MBTL2Q969R5 705 aa19.14■□□□□ 0.65
BNIP3-202ENST00000540159 SUPT6HQ7KZ85 1726 aaKnown RBP19.13■□□□□ 0.65
BNIP3-202ENST00000540159 ZNF608Q9ULD9 1512 aaPredicted RBP19.13■□□□□ 0.65
BNIP3-202ENST00000540159 KDM6BO15054 1643 aa19.12■□□□□ 0.65
BNIP3-202ENST00000540159 CCDC184Q52MB2 194 aa19.11■□□□□ 0.65
BNIP3-202ENST00000540159 WASHC2AQ641Q2 1341 aa19.1■□□□□ 0.65
BNIP3-202ENST00000540159 EHBP1L1Q8N3D4 1523 aa19.09■□□□□ 0.65
BNIP3-202ENST00000540159 EPRSP07814 1512 aaKnown RBP19.09■□□□□ 0.65
BNIP3-202ENST00000540159 C11orf95C9JLR9 678 aaPredicted RBP19.08■□□□□ 0.65
BNIP3-202ENST00000540159 THOC2Q8NI27 1593 aaKnown RBP19.08■□□□□ 0.64
BNIP3-202ENST00000540159 UGGT2Q9NYU1 1516 aa19.07■□□□□ 0.64
BNIP3-202ENST00000540159 SLC4A1APQ9BWU0 796 aaKnown RBP19.07■□□□□ 0.64
BNIP3-202ENST00000540159 FAM9BQ8IZU0 186 aa19.07■□□□□ 0.64
BNIP3-202ENST00000540159 TARBP1Q13395 1621 aaKnown RBP19.07■□□□□ 0.64
BNIP3-202ENST00000540159 CCER2I3L3R5 266 aa19.06■□□□□ 0.64
BNIP3-202ENST00000540159 EIF4G2P78344 907 aaKnown RBP eCLIP19.05■□□□□ 0.64
BNIP3-202ENST00000540159 IQGAP2Q13576 1575 aa19.04■□□□□ 0.64
BNIP3-202ENST00000540159 DENND4BO75064 1496 aaPredicted RBP19.03■□□□□ 0.64
BNIP3-202ENST00000540159 NBPF8Q3BBV2 869 aa19.03■□□□□ 0.64
BNIP3-202ENST00000540159 CHMP7Q8WUX9 453 aaPredicted RBP19.01■□□□□ 0.63
BNIP3-202ENST00000540159 PBRM1Q86U86 1689 aa18.99■□□□□ 0.63
BNIP3-202ENST00000540159 HECW1Q76N89 1606 aa18.98■□□□□ 0.63
BNIP3-202ENST00000540159 CFDP1Q9UEE9 299 aaPredicted RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms