RNA–Protein interactions for RNA: ENST00000539484.1

CCDC144NL-203, Transcript of coiled-coil domain containing 144 family, N-terminal like, humanhuman

TSL 3

Gene CCDC144NL, Length 751 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-203ENST00000539484 C19orf67A6NJJ6 358 aa17.17■□□□□ 0.34
CCDC144NL-203ENST00000539484 WIZO95785 1651 aa17.14■□□□□ 0.33
CCDC144NL-203ENST00000539484 ZNF692Q9BU19 519 aaPredicted RBP17.11■□□□□ 0.33
CCDC144NL-203ENST00000539484 CADPSQ9ULU8 1353 aa17.11■□□□□ 0.33
CCDC144NL-203ENST00000539484 GABBR2O75899 941 aa17.08■□□□□ 0.32
CCDC144NL-203ENST00000539484 MKRN4PQ13434 485 aaPredicted RBP17.06■□□□□ 0.32
CCDC144NL-203ENST00000539484 SSUH2Q9Y2M2 353 aa17.05■□□□□ 0.32
CCDC144NL-203ENST00000539484 MRC2Q9UBG0 1479 aa17.03■□□□□ 0.32
CCDC144NL-203ENST00000539484 LHX8Q68G74 356 aa17.01■□□□□ 0.31
CCDC144NL-203ENST00000539484 CHADLQ6NUI6 762 aa16.98■□□□□ 0.31
CCDC144NL-203ENST00000539484 CEP164Q9UPV0 1460 aa16.98■□□□□ 0.31
CCDC144NL-203ENST00000539484 WDR62O43379 1518 aa16.96■□□□□ 0.31
CCDC144NL-203ENST00000539484 FANCD2Q9BXW9 1451 aa16.93■□□□□ 0.3
CCDC144NL-203ENST00000539484 RSF1Q96T23 1441 aaPredicted RBP16.91■□□□□ 0.3
CCDC144NL-203ENST00000539484 TOP2AP11388 1531 aaKnown RBP16.91■□□□□ 0.3
CCDC144NL-203ENST00000539484 PRR29P0C7W0 189 aa16.9■□□□□ 0.3
CCDC144NL-203ENST00000539484 CFTRP13569 1480 aa16.87■□□□□ 0.29
CCDC144NL-203ENST00000539484 PRDM2Q13029 1718 aa16.85■□□□□ 0.29
CCDC144NL-203ENST00000539484 TRIM41Q8WV44 630 aa16.8■□□□□ 0.28
CCDC144NL-203ENST00000539484 URB2Q14146 1524 aaKnown RBP16.75■□□□□ 0.27
CCDC144NL-203ENST00000539484 CD44P16070 742 aaKnown RBP16.72■□□□□ 0.27
CCDC144NL-203ENST00000539484 CCDC88BA6NC98 1476 aa16.69■□□□□ 0.26
CCDC144NL-203ENST00000539484 POTEIP0CG38 1075 aa16.68■□□□□ 0.26
CCDC144NL-203ENST00000539484 FARP1Q9Y4F1 1045 aaPredicted RBP16.67■□□□□ 0.26
CCDC144NL-203ENST00000539484 IFT140Q96RY7 1462 aa16.62■□□□□ 0.25
CCDC144NL-203ENST00000539484 CLCN6P51797 869 aa16.62■□□□□ 0.25
CCDC144NL-203ENST00000539484 ABCC8Q09428 1581 aa16.6■□□□□ 0.25
CCDC144NL-203ENST00000539484 TOPBP1Q92547 1522 aa16.59■□□□□ 0.25
CCDC144NL-203ENST00000539484 DNMBPQ6XZF7 1577 aa16.55■□□□□ 0.24
CCDC144NL-203ENST00000539484 ZNF608Q9ULD9 1512 aaPredicted RBP16.55■□□□□ 0.24
CCDC144NL-203ENST00000539484 DCBLD2Q96PD2 775 aa16.54■□□□□ 0.24
CCDC144NL-203ENST00000539484 EIF4G3O43432 1585 aaKnown RBP16.51■□□□□ 0.23
CCDC144NL-203ENST00000539484 RIMBP3CA6NJZ7 1639 aa16.49■□□□□ 0.23
CCDC144NL-203ENST00000539484 RIMBP3BA6NNM3 1639 aa16.49■□□□□ 0.23
CCDC144NL-203ENST00000539484 RIMBP3Q9UFD9 1639 aa16.49■□□□□ 0.23
CCDC144NL-203ENST00000539484 CHD1O14646 1710 aa16.45■□□□□ 0.22
CCDC144NL-203ENST00000539484 PLSCR2Q9NRY7 297 aa16.45■□□□□ 0.22
CCDC144NL-203ENST00000539484 TARBP1Q13395 1621 aaKnown RBP16.44■□□□□ 0.22
CCDC144NL-203ENST00000539484 AQRO60306 1485 aaKnown RBP eCLIP16.42■□□□□ 0.222e-7■■■■■ 31
CCDC144NL-203ENST00000539484 ARHGEF11O15085 1522 aa16.41■□□□□ 0.22
CCDC144NL-203ENST00000539484 ZNF579Q8NAF0 562 aaKnown RBP16.41■□□□□ 0.22
CCDC144NL-203ENST00000539484 POLA1P09884 1462 aaPredicted RBP16.41■□□□□ 0.22
CCDC144NL-203ENST00000539484 ZRANB1Q9UGI0 708 aa16.4■□□□□ 0.22
CCDC144NL-203ENST00000539484 SOGA1O94964 1423 aa16.36■□□□□ 0.21
CCDC144NL-203ENST00000539484 RAD54L2Q9Y4B4 1467 aa16.35■□□□□ 0.21
CCDC144NL-203ENST00000539484 WDR97A6NE52 1622 aa16.32■□□□□ 0.2
CCDC144NL-203ENST00000539484 CYB5RLQ6IPT4 315 aa16.32■□□□□ 0.2
CCDC144NL-203ENST00000539484 FGD5Q6ZNL6 1462 aa16.31■□□□□ 0.2
CCDC144NL-203ENST00000539484 TDRD9Q8NDG6 1382 aaKnown RBP16.31■□□□□ 0.2
CCDC144NL-203ENST00000539484 CREBZFQ9NS37 354 aa16.29■□□□□ 0.2
CCDC144NL-203ENST00000539484 SNAPC4Q5SXM2 1469 aa16.27■□□□□ 0.19
CCDC144NL-203ENST00000539484 CUX1P39880 1505 aa16.26■□□□□ 0.19
CCDC144NL-203ENST00000539484 GALR2O43603 387 aaPredicted RBP16.26■□□□□ 0.19
CCDC144NL-203ENST00000539484 CHMP7Q8WUX9 453 aaPredicted RBP16.26■□□□□ 0.19
CCDC144NL-203ENST00000539484 STAG3Q9UJ98 1225 aa16.26■□□□□ 0.19
CCDC144NL-203ENST00000539484 SYNJ1O43426 1573 aa16.24■□□□□ 0.19
CCDC144NL-203ENST00000539484 MAGI1Q96QZ7 1491 aaPredicted RBP16.23■□□□□ 0.19
CCDC144NL-203ENST00000539484 GRIN2BQ13224 1484 aa16.22■□□□□ 0.19
CCDC144NL-203ENST00000539484 ARAP1Q96P48 1450 aa16.22■□□□□ 0.19
CCDC144NL-203ENST00000539484 PBRM1Q86U86 1689 aa16.22■□□□□ 0.19
CCDC144NL-203ENST00000539484 SUPT5HO00267 1087 aaKnown RBP16.21■□□□□ 0.19
CCDC144NL-203ENST00000539484 OTUD5Q96G74 571 aa16.2■□□□□ 0.18
CCDC144NL-203ENST00000539484 SYNJ2O15056 1496 aa16.17■□□□□ 0.18
CCDC144NL-203ENST00000539484 CLASP1Q7Z460 1538 aa16.17■□□□□ 0.18
CCDC144NL-203ENST00000539484 GAPVD1Q14C86 1478 aa16.16■□□□□ 0.18
CCDC144NL-203ENST00000539484 PAK3O75914 559 aaPredicted RBP16.16■□□□□ 0.18
CCDC144NL-203ENST00000539484 POTEB2H3BUK9 544 aa16.12■□□□□ 0.17
CCDC144NL-203ENST00000539484 ABCA10Q8WWZ4 1543 aa16.11■□□□□ 0.17
CCDC144NL-203ENST00000539484 ABCA5Q8WWZ7 1642 aa16.1■□□□□ 0.17
CCDC144NL-203ENST00000539484 PHF12Q96QT6 1004 aa16.1■□□□□ 0.17
CCDC144NL-203ENST00000539484 WRNQ14191 1432 aaPredicted RBP eCLIP16.07■□□□□ 0.16
CCDC144NL-203ENST00000539484 POTEMA6NI47 508 aa16.04■□□□□ 0.16
CCDC144NL-203ENST00000539484 BIVM-ERCC5R4GMW8 1640 aa16.04■□□□□ 0.16
CCDC144NL-203ENST00000539484 NPM1P06748 294 aaKnown RBP eCLIP16.03■□□□□ 0.16
CCDC144NL-203ENST00000539484 TOP2BQ02880 1626 aa16.03■□□□□ 0.16
CCDC144NL-203ENST00000539484 GRIN2AQ12879 1464 aa16■□□□□ 0.15
CCDC144NL-203ENST00000539484 ADAMTS12P58397 1594 aa16■□□□□ 0.15
CCDC144NL-203ENST00000539484 SPDYE4A6NLX3 237 aa15.99■□□□□ 0.15
CCDC144NL-203ENST00000539484 PELP1Q8IZL8 1130 aaKnown RBP15.99■□□□□ 0.15
CCDC144NL-203ENST00000539484 CSRNP3Q8WYN3 585 aa15.99■□□□□ 0.15
CCDC144NL-203ENST00000539484 POTEGQ6S5H5 508 aa15.98■□□□□ 0.15
CCDC144NL-203ENST00000539484 FHAD1B1AJZ9 1412 aa15.95■□□□□ 0.14
CCDC144NL-203ENST00000539484 CEP170Q5SW79 1584 aa15.94■□□□□ 0.14
CCDC144NL-203ENST00000539484 ERICH3Q5RHP9 1530 aa15.94■□□□□ 0.14
CCDC144NL-203ENST00000539484 NUP160Q12769 1436 aa15.93■□□□□ 0.14
CCDC144NL-203ENST00000539484 MNX1P50219 401 aaPredicted RBP15.9■□□□□ 0.14
CCDC144NL-203ENST00000539484 ERCC6L2Q5T890 1561 aa15.9■□□□□ 0.14
CCDC144NL-203ENST00000539484 METRNQ9UJH8 293 aa15.89■□□□□ 0.13
CCDC144NL-203ENST00000539484 SHROOM2Q13796 1616 aa15.88■□□□□ 0.13
CCDC144NL-203ENST00000539484 ASTLQ6HA08 431 aaPredicted RBP15.87■□□□□ 0.13
CCDC144NL-203ENST00000539484 SLC39A7Q92504 469 aa15.86■□□□□ 0.13
CCDC144NL-203ENST00000539484 C7P10643 843 aa15.85■□□□□ 0.13
CCDC144NL-203ENST00000539484 MS4A3Q96HJ5 214 aa15.85■□□□□ 0.13
CCDC144NL-203ENST00000539484 ATMINO43313 823 aaPredicted RBP15.84■□□□□ 0.13
CCDC144NL-203ENST00000539484 PCDH10Q9P2E7 1040 aa15.83■□□□□ 0.12
CCDC144NL-203ENST00000539484 MAMSTRQ6ZN01 415 aa15.81■□□□□ 0.12
CCDC144NL-203ENST00000539484 PRG4Q92954 1404 aaPredicted RBP15.81■□□□□ 0.12
CCDC144NL-203ENST00000539484 JPH4Q96JJ6 628 aa15.8■□□□□ 0.12
CCDC144NL-203ENST00000539484 POTEJP0CG39 1038 aa15.79■□□□□ 0.12
CCDC144NL-203ENST00000539484 KIF13AQ9H1H9 1805 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms