RNA–Protein interactions for RNA: ENST00000539061.5

C2CD3-213, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2 BASIC

Gene C2CD3, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-213ENST00000539061 SETD5Q9C0A6 1442 aa24.36■■□□□ 1.49
C2CD3-213ENST00000539061 ARHGAP35Q9NRY4 1499 aa24.36■■□□□ 1.49
C2CD3-213ENST00000539061 WDR97A6NE52 1622 aa24.34■■□□□ 1.49
C2CD3-213ENST00000539061 KIF27Q86VH2 1401 aa24.34■■□□□ 1.49
C2CD3-213ENST00000539061 TIMELESSQ9UNS1 1208 aa24.33■■□□□ 1.48
C2CD3-213ENST00000539061 ANP32CO43423 234 aa24.28■■□□□ 1.48
C2CD3-213ENST00000539061 SIN3AQ96ST3 1273 aa24.28■■□□□ 1.48
C2CD3-213ENST00000539061 TRIM52Q96A61 297 aa24.27■■□□□ 1.48
C2CD3-213ENST00000539061 MAP3K1Q13233 1512 aa24.25■■□□□ 1.47
C2CD3-213ENST00000539061 DNAJC5BQ9UF47 199 aa24.24■■□□□ 1.47
C2CD3-213ENST00000539061 TIAM1Q13009 1591 aa24.21■■□□□ 1.47
C2CD3-213ENST00000539061 CUX1P39880 1505 aa24.2■■□□□ 1.47
C2CD3-213ENST00000539061 MSH5O43196 834 aa24.15■■□□□ 1.46
C2CD3-213ENST00000539061 LRRC9Q6ZRR7 1453 aa24.15■■□□□ 1.46
C2CD3-213ENST00000539061 HIRIP3Q9BW71 556 aaPredicted RBP24.14■■□□□ 1.45
C2CD3-213ENST00000539061 FAM50AQ14320 339 aaKnown RBP24.13■■□□□ 1.45
C2CD3-213ENST00000539061 PHLDB1Q86UU1 1377 aa24.13■■□□□ 1.45
C2CD3-213ENST00000539061 FANCIQ9NVI1 1328 aa24.12■■□□□ 1.45
C2CD3-213ENST00000539061 CFTRP13569 1480 aa24.11■■□□□ 1.45
C2CD3-213ENST00000539061 CDK11AQ9UQ88 783 aaPredicted RBP24.07■■□□□ 1.44
C2CD3-213ENST00000539061 CADPSQ9ULU8 1353 aa24.06■■□□□ 1.44
C2CD3-213ENST00000539061 ERICH6Q7L0X2 663 aa24.02■■□□□ 1.44
C2CD3-213ENST00000539061 IGF1RP08069 1367 aa24.01■■□□□ 1.43
C2CD3-213ENST00000539061 FHAD1B1AJZ9 1412 aa24■■□□□ 1.43
C2CD3-213ENST00000539061 TONSLQ96HA7 1378 aa23.99■■□□□ 1.43
C2CD3-213ENST00000539061 NESP48681 1621 aa23.98■■□□□ 1.43
C2CD3-213ENST00000539061 HNRNPUQ00839 825 aaKnown RBP eCLIP23.96■■□□□ 1.43
C2CD3-213ENST00000539061 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.96■■□□□ 1.43
C2CD3-213ENST00000539061 ERICH6BQ5W0A0 696 aa23.95■■□□□ 1.42
C2CD3-213ENST00000539061 CFAP43Q8NDM7 1665 aa23.94■■□□□ 1.42
C2CD3-213ENST00000539061 CARMIL1Q5VZK9 1371 aa23.93■■□□□ 1.42
C2CD3-213ENST00000539061 MYT1LQ9UL68 1186 aa23.91■■□□□ 1.42
C2CD3-213ENST00000539061 IRX6P78412 446 aaPredicted RBP23.89■■□□□ 1.42
C2CD3-213ENST00000539061 ATP1B4Q9UN42 357 aaPredicted RBP23.86■■□□□ 1.41
C2CD3-213ENST00000539061 PCF11O94913 1555 aaKnown RBP23.86■■□□□ 1.41
C2CD3-213ENST00000539061 PPP4R2Q9NY27 417 aa23.85■■□□□ 1.41
C2CD3-213ENST00000539061 PRDM2Q13029 1718 aa23.84■■□□□ 1.41
C2CD3-213ENST00000539061 FANCD2Q9BXW9 1451 aa23.82■■□□□ 1.4
C2CD3-213ENST00000539061 UACAQ9BZF9 1416 aa23.81■■□□□ 1.4
C2CD3-213ENST00000539061 P3H3Q8IVL6 736 aa23.81■■□□□ 1.4
C2CD3-213ENST00000539061 CCDC18Q5T9S5 1454 aa23.81■■□□□ 1.4
C2CD3-213ENST00000539061 FYCO1Q9BQS8 1478 aa23.78■■□□□ 1.4
C2CD3-213ENST00000539061 FGD6Q6ZV73 1430 aa23.76■■□□□ 1.39
C2CD3-213ENST00000539061 HFM1A2PYH4 1435 aa23.75■■□□□ 1.39
C2CD3-213ENST00000539061 CASKIN1Q8WXD9 1431 aa23.75■■□□□ 1.39
C2CD3-213ENST00000539061 FGD5Q6ZNL6 1462 aa23.74■■□□□ 1.39
C2CD3-213ENST00000539061 AQRO60306 1485 aaKnown RBP eCLIP23.72■■□□□ 1.39
C2CD3-213ENST00000539061 FHOD3Q2V2M9 1422 aa23.72■■□□□ 1.39
C2CD3-213ENST00000539061 LAMC3Q9Y6N6 1575 aa23.72■■□□□ 1.39
C2CD3-213ENST00000539061 WASHC2AQ641Q2 1341 aa23.71■■□□□ 1.39
C2CD3-213ENST00000539061 PTPN23Q9H3S7 1636 aa23.69■■□□□ 1.38
C2CD3-213ENST00000539061 KDM5BQ9UGL1 1544 aa23.68■■□□□ 1.38
C2CD3-213ENST00000539061 HSPA5P11021 654 aaKnown RBP23.68■■□□□ 1.38
C2CD3-213ENST00000539061 DEKP35659 375 aaKnown RBP23.68■■□□□ 1.38
C2CD3-213ENST00000539061 EFCAB5A4FU69 1503 aa23.67■■□□□ 1.38
C2CD3-213ENST00000539061 PTPRKQ15262 1439 aa23.67■■□□□ 1.38
C2CD3-213ENST00000539061 NAIPQ13075 1403 aa23.64■■□□□ 1.38
C2CD3-213ENST00000539061 B4GALNT3Q6L9W6 998 aa23.63■■□□□ 1.37
C2CD3-213ENST00000539061 EIF4G2P78344 907 aaKnown RBP eCLIP23.62■■□□□ 1.37
C2CD3-213ENST00000539061 NCOA2Q15596 1464 aa23.62■■□□□ 1.37
C2CD3-213ENST00000539061 CNTLNQ9NXG0 1405 aa23.62■■□□□ 1.37
C2CD3-213ENST00000539061 PDS5BQ9NTI5 1447 aa23.61■■□□□ 1.37
C2CD3-213ENST00000539061 MTUS2Q5JR59 1369 aa23.61■■□□□ 1.37
C2CD3-213ENST00000539061 ZBED9Q6R2W3 1325 aa23.61■■□□□ 1.37
C2CD3-213ENST00000539061 CCDC184Q52MB2 194 aa23.61■■□□□ 1.37
C2CD3-213ENST00000539061 FMN1Q68DA7 1419 aa23.6■■□□□ 1.37
C2CD3-213ENST00000539061 NOP58Q9Y2X3 529 aaKnown RBP23.59■■□□□ 1.37
C2CD3-213ENST00000539061 PRKRIP1Q9H875 184 aaPredicted RBP23.57■■□□□ 1.36
C2CD3-213ENST00000539061 FAM9BQ8IZU0 186 aa23.57■■□□□ 1.36
C2CD3-213ENST00000539061 KIF21AQ7Z4S6 1674 aa23.55■■□□□ 1.36
C2CD3-213ENST00000539061 TOPBP1Q92547 1522 aa23.55■■□□□ 1.36
C2CD3-213ENST00000539061 MRS2Q9HD23 443 aa23.55■■□□□ 1.36
C2CD3-213ENST00000539061 URB2Q14146 1524 aaKnown RBP23.53■■□□□ 1.36
C2CD3-213ENST00000539061 MYOM3Q5VTT5 1437 aa23.53■■□□□ 1.36
C2CD3-213ENST00000539061 DNMBPQ6XZF7 1577 aa23.52■■□□□ 1.36
C2CD3-213ENST00000539061 SNAPC4Q5SXM2 1469 aa23.51■■□□□ 1.35
C2CD3-213ENST00000539061 RAD54L2Q9Y4B4 1467 aa23.5■■□□□ 1.35
C2CD3-213ENST00000539061 CCDC7Q96M83 1385 aa23.49■■□□□ 1.35
C2CD3-213ENST00000539061 NCOA1Q15788 1441 aa23.48■■□□□ 1.35
C2CD3-213ENST00000539061 POLA1P09884 1462 aaPredicted RBP23.47■■□□□ 1.35
C2CD3-213ENST00000539061 NBR1Q14596 966 aa23.46■■□□□ 1.35
C2CD3-213ENST00000539061 C11orf95C9JLR9 678 aaPredicted RBP23.45■■□□□ 1.34
C2CD3-213ENST00000539061 PAK3O75914 559 aaPredicted RBP23.45■■□□□ 1.34
C2CD3-213ENST00000539061 RRP7BPQ9NSQ0 103 aa23.43■■□□□ 1.34
C2CD3-213ENST00000539061 CTTNBP2Q8WZ74 1663 aa23.42■■□□□ 1.34
C2CD3-213ENST00000539061 L3MBTL2Q969R5 705 aa23.41■■□□□ 1.34
C2CD3-213ENST00000539061 DENND4BO75064 1496 aaPredicted RBP23.41■■□□□ 1.34
C2CD3-213ENST00000539061 HECW1Q76N89 1606 aa23.41■■□□□ 1.34
C2CD3-213ENST00000539061 ABCA10Q8WWZ4 1543 aa23.4■■□□□ 1.34
C2CD3-213ENST00000539061 ANP32AP39687 249 aaKnown RBP23.4■■□□□ 1.34
C2CD3-213ENST00000539061 SUPT6HQ7KZ85 1726 aaKnown RBP23.4■■□□□ 1.34
C2CD3-213ENST00000539061 SMG6Q86US8 1419 aaKnown RBP23.39■■□□□ 1.33
C2CD3-213ENST00000539061 CUL7Q14999 1698 aa23.39■■□□□ 1.33
C2CD3-213ENST00000539061 IPO9Q96P70 1041 aaKnown RBP23.38■■□□□ 1.33
C2CD3-213ENST00000539061 EHBP1L1Q8N3D4 1523 aa23.37■■□□□ 1.33
C2CD3-213ENST00000539061 MPHOSPH9Q99550 1183 aa23.37■■□□□ 1.33
C2CD3-213ENST00000539061 CHIC2Q9UKJ5 165 aa23.36■■□□□ 1.33
C2CD3-213ENST00000539061 CCDC136Q96JN2 1154 aa23.35■■□□□ 1.33
C2CD3-213ENST00000539061 AKNAQ7Z591 1439 aa23.35■■□□□ 1.33
C2CD3-213ENST00000539061 GRIN2BQ13224 1484 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms