RNA–Protein interactions for RNA: ENST00000534526.6

FGD4-212, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

TSL 5 BASIC

Gene FGD4, Length 2,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-212ENST00000534526 SIN3AQ96ST3 1273 aa23.22■■□□□ 1.31
FGD4-212ENST00000534526 HMGXB3Q12766 1538 aa23.22■■□□□ 1.31
FGD4-212ENST00000534526 CADPSQ9ULU8 1353 aa23.2■■□□□ 1.31
FGD4-212ENST00000534526 TRIM52Q96A61 297 aa23.2■■□□□ 1.3
FGD4-212ENST00000534526 WDR97A6NE52 1622 aa23.2■■□□□ 1.3
FGD4-212ENST00000534526 BIVM-ERCC5R4GMW8 1640 aa23.19■■□□□ 1.3
FGD4-212ENST00000534526 HIRIP3Q9BW71 556 aaPredicted RBP23.18■■□□□ 1.3
FGD4-212ENST00000534526 PPP1R15AO75807 674 aaPredicted RBP23.18■■□□□ 1.3
FGD4-212ENST00000534526 ARHGAP35Q9NRY4 1499 aa23.17■■□□□ 1.3
FGD4-212ENST00000534526 CFTRP13569 1480 aa23.14■■□□□ 1.29
FGD4-212ENST00000534526 SETD5Q9C0A6 1442 aa23.12■■□□□ 1.29
FGD4-212ENST00000534526 CUX1P39880 1505 aa23.1■■□□□ 1.29
FGD4-212ENST00000534526 ANO8Q9HCE9 1232 aaPredicted RBP23.1■■□□□ 1.29
FGD4-212ENST00000534526 KIF27Q86VH2 1401 aa23.08■■□□□ 1.29
FGD4-212ENST00000534526 CCER2I3L3R5 266 aa23.06■■□□□ 1.28
FGD4-212ENST00000534526 ANP32CO43423 234 aa23.06■■□□□ 1.28
FGD4-212ENST00000534526 P3H3Q8IVL6 736 aa23.05■■□□□ 1.28
FGD4-212ENST00000534526 FAM50AQ14320 339 aaKnown RBP23.04■■□□□ 1.28
FGD4-212ENST00000534526 FANCD2Q9BXW9 1451 aa23■■□□□ 1.27
FGD4-212ENST00000534526 PHLDB1Q86UU1 1377 aa23■■□□□ 1.27
FGD4-212ENST00000534526 TIAM1Q13009 1591 aa22.98■■□□□ 1.27
FGD4-212ENST00000534526 RAD54L2Q9Y4B4 1467 aa22.98■■□□□ 1.27
FGD4-212ENST00000534526 ATP1B4Q9UN42 357 aaPredicted RBP22.96■■□□□ 1.27
FGD4-212ENST00000534526 TIMELESSQ9UNS1 1208 aa22.94■■□□□ 1.26
FGD4-212ENST00000534526 LRRC9Q6ZRR7 1453 aa22.93■■□□□ 1.26
FGD4-212ENST00000534526 ERICH6Q7L0X2 663 aa22.92■■□□□ 1.26
FGD4-212ENST00000534526 IRX6P78412 446 aaPredicted RBP22.9■■□□□ 1.26
FGD4-212ENST00000534526 TDRD9Q8NDG6 1382 aaKnown RBP22.9■■□□□ 1.26
FGD4-212ENST00000534526 MAP3K1Q13233 1512 aa22.89■■□□□ 1.26
FGD4-212ENST00000534526 FGD5Q6ZNL6 1462 aa22.89■■□□□ 1.25
FGD4-212ENST00000534526 DEKP35659 375 aaKnown RBP22.87■■□□□ 1.25
FGD4-212ENST00000534526 CCDC136Q96JN2 1154 aa22.85■■□□□ 1.25
FGD4-212ENST00000534526 FANCIQ9NVI1 1328 aa22.84■■□□□ 1.25
FGD4-212ENST00000534526 HNRNPUQ00839 825 aaKnown RBP eCLIP22.83■■□□□ 1.25
FGD4-212ENST00000534526 IGF1RP08069 1367 aa22.83■■□□□ 1.24
FGD4-212ENST00000534526 CDK11AQ9UQ88 783 aaPredicted RBP22.83■■□□□ 1.24
FGD4-212ENST00000534526 SALL2Q9Y467 1007 aaPredicted RBP22.8■■□□□ 1.24
FGD4-212ENST00000534526 TONSLQ96HA7 1378 aa22.8■■□□□ 1.24
FGD4-212ENST00000534526 CARMIL1Q5VZK9 1371 aa22.74■■□□□ 1.23
FGD4-212ENST00000534526 ARID3CA6NKF2 412 aa22.74■■□□□ 1.23
FGD4-212ENST00000534526 NBR1Q14596 966 aa22.73■■□□□ 1.23
FGD4-212ENST00000534526 FHAD1B1AJZ9 1412 aa22.72■■□□□ 1.23
FGD4-212ENST00000534526 PCF11O94913 1555 aaKnown RBP22.71■■□□□ 1.23
FGD4-212ENST00000534526 CFAP43Q8NDM7 1665 aa22.69■■□□□ 1.22
FGD4-212ENST00000534526 URB2Q14146 1524 aaKnown RBP22.69■■□□□ 1.22
FGD4-212ENST00000534526 TOPBP1Q92547 1522 aa22.69■■□□□ 1.22
FGD4-212ENST00000534526 POLA1P09884 1462 aaPredicted RBP22.69■■□□□ 1.22
FGD4-212ENST00000534526 FBLN2P98095 1184 aa22.68■■□□□ 1.22
FGD4-212ENST00000534526 RTN4Q9NQC3 1192 aaKnown RBP22.66■■□□□ 1.22
FGD4-212ENST00000534526 PDS5BQ9NTI5 1447 aa22.64■■□□□ 1.22
FGD4-212ENST00000534526 FHOD3Q2V2M9 1422 aa22.62■■□□□ 1.21
FGD4-212ENST00000534526 CCDC18Q5T9S5 1454 aa22.62■■□□□ 1.21
FGD4-212ENST00000534526 PPP4R2Q9NY27 417 aa22.62■■□□□ 1.21
FGD4-212ENST00000534526 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.61■■□□□ 1.21
FGD4-212ENST00000534526 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.61■■□□□ 1.21
FGD4-212ENST00000534526 CCDC184Q52MB2 194 aa22.6■■□□□ 1.21
FGD4-212ENST00000534526 WASHC2AQ641Q2 1341 aa22.6■■□□□ 1.21
FGD4-212ENST00000534526 AQRO60306 1485 aaKnown RBP eCLIP22.59■■□□□ 1.21
FGD4-212ENST00000534526 UACAQ9BZF9 1416 aa22.58■■□□□ 1.21
FGD4-212ENST00000534526 PTPRKQ15262 1439 aa22.57■■□□□ 1.2
FGD4-212ENST00000534526 FGD6Q6ZV73 1430 aa22.57■■□□□ 1.2
FGD4-212ENST00000534526 ERICH6BQ5W0A0 696 aa22.56■■□□□ 1.2
FGD4-212ENST00000534526 B4GALNT3Q6L9W6 998 aa22.56■■□□□ 1.2
FGD4-212ENST00000534526 HSPA5P11021 654 aaKnown RBP22.56■■□□□ 1.2
FGD4-212ENST00000534526 ERCC6Q03468 1493 aa22.56■■□□□ 1.2
FGD4-212ENST00000534526 KIF21AQ7Z4S6 1674 aa22.55■■□□□ 1.2
FGD4-212ENST00000534526 KDM5BQ9UGL1 1544 aa22.54■■□□□ 1.2
FGD4-212ENST00000534526 HFM1A2PYH4 1435 aa22.54■■□□□ 1.2
FGD4-212ENST00000534526 FYCO1Q9BQS8 1478 aa22.53■■□□□ 1.2
FGD4-212ENST00000534526 IL27Q8NEV9 243 aa22.53■■□□□ 1.2
FGD4-212ENST00000534526 CASKIN1Q8WXD9 1431 aa22.51■■□□□ 1.19
FGD4-212ENST00000534526 FAM9BQ8IZU0 186 aa22.5■■□□□ 1.19
FGD4-212ENST00000534526 PTPN23Q9H3S7 1636 aa22.5■■□□□ 1.19
FGD4-212ENST00000534526 PAK3O75914 559 aaPredicted RBP22.49■■□□□ 1.19
FGD4-212ENST00000534526 DNMBPQ6XZF7 1577 aa22.49■■□□□ 1.19
FGD4-212ENST00000534526 LAMC3Q9Y6N6 1575 aa22.48■■□□□ 1.19
FGD4-212ENST00000534526 NAIPQ13075 1403 aa22.48■■□□□ 1.19
FGD4-212ENST00000534526 MYT1LQ9UL68 1186 aa22.47■■□□□ 1.19
FGD4-212ENST00000534526 MTUS2Q5JR59 1369 aa22.45■■□□□ 1.18
FGD4-212ENST00000534526 EIF4G2P78344 907 aaKnown RBP eCLIP22.43■■□□□ 1.18
FGD4-212ENST00000534526 ZNF608Q9ULD9 1512 aaPredicted RBP22.43■■□□□ 1.18
FGD4-212ENST00000534526 CNTLNQ9NXG0 1405 aa22.42■■□□□ 1.18
FGD4-212ENST00000534526 PRKRIP1Q9H875 184 aaPredicted RBP22.42■■□□□ 1.18
FGD4-212ENST00000534526 MRS2Q9HD23 443 aa22.42■■□□□ 1.18
FGD4-212ENST00000534526 C11orf95C9JLR9 678 aaPredicted RBP22.41■■□□□ 1.18
FGD4-212ENST00000534526 PRDM2Q13029 1718 aa22.41■■□□□ 1.18
FGD4-212ENST00000534526 NOP58Q9Y2X3 529 aaKnown RBP22.4■■□□□ 1.18
FGD4-212ENST00000534526 NCOA2Q15596 1464 aa22.39■■□□□ 1.18
FGD4-212ENST00000534526 RRP7BPQ9NSQ0 103 aa22.39■■□□□ 1.17
FGD4-212ENST00000534526 GAPVD1Q14C86 1478 aa22.39■■□□□ 1.17
FGD4-212ENST00000534526 ZBED9Q6R2W3 1325 aa22.39■■□□□ 1.17
FGD4-212ENST00000534526 FMN1Q68DA7 1419 aa22.38■■□□□ 1.17
FGD4-212ENST00000534526 EFCAB5A4FU69 1503 aa22.38■■□□□ 1.17
FGD4-212ENST00000534526 CHIC2Q9UKJ5 165 aa22.35■■□□□ 1.17
FGD4-212ENST00000534526 ABCA10Q8WWZ4 1543 aa22.35■■□□□ 1.17
FGD4-212ENST00000534526 SNAPC4Q5SXM2 1469 aa22.34■■□□□ 1.17
FGD4-212ENST00000534526 MYOM3Q5VTT5 1437 aa22.33■■□□□ 1.17
FGD4-212ENST00000534526 CCDC7Q96M83 1385 aa22.32■■□□□ 1.16
FGD4-212ENST00000534526 DENND4BO75064 1496 aaPredicted RBP22.32■■□□□ 1.16
FGD4-212ENST00000534526 L3MBTL2Q969R5 705 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms