RNA–Protein interactions for RNA: ENST00000534417.1

TTC17-215, Transcript of tetratricopeptide repeat domain 17, humanhuman

TSL 2

Gene TTC17, Length 823 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC17-215ENST00000534417 PDS5BQ9NTI5 1447 aa15.82■□□□□ 0.12
TTC17-215ENST00000534417 AQRO60306 1485 aaKnown RBP eCLIP15.82■□□□□ 0.12
TTC17-215ENST00000534417 RAD54L2Q9Y4B4 1467 aa15.82■□□□□ 0.12
TTC17-215ENST00000534417 PHF23Q9BUL5 403 aaPredicted RBP15.78■□□□□ 0.12
TTC17-215ENST00000534417 KIF21AQ7Z4S6 1674 aa15.78■□□□□ 0.12
TTC17-215ENST00000534417 FYCO1Q9BQS8 1478 aa15.77■□□□□ 0.11
TTC17-215ENST00000534417 TARBP1Q13395 1621 aaKnown RBP15.76■□□□□ 0.11
TTC17-215ENST00000534417 PCF11O94913 1555 aaKnown RBP15.76■□□□□ 0.11
TTC17-215ENST00000534417 KANK4Q5T7N3 995 aaPredicted RBP15.76■□□□□ 0.11
TTC17-215ENST00000534417 LRRC9Q6ZRR7 1453 aa15.75■□□□□ 0.11
TTC17-215ENST00000534417 SAMD9Q5K651 1589 aa15.75■□□□□ 0.11
TTC17-215ENST00000534417 CCNB3Q8WWL7 1395 aa15.74■□□□□ 0.11
TTC17-215ENST00000534417 CASKIN1Q8WXD9 1431 aa15.72■□□□□ 0.11
TTC17-215ENST00000534417 HNRNPUL2Q1KMD3 747 aaKnown RBP15.72■□□□□ 0.11
TTC17-215ENST00000534417 RANGAP1P46060 587 aaPredicted RBP15.71■□□□□ 0.11
TTC17-215ENST00000534417 GAPVD1Q14C86 1478 aa15.7■□□□□ 0.1
TTC17-215ENST00000534417 THOC2Q8NI27 1593 aaKnown RBP15.7■□□□□ 0.1
TTC17-215ENST00000534417 DHX57Q6P158 1386 aaKnown RBP15.68■□□□□ 0.1
TTC17-215ENST00000534417 PBRM1Q86U86 1689 aa15.67■□□□□ 0.1
TTC17-215ENST00000534417 FMN1Q68DA7 1419 aa15.66■□□□□ 0.1
TTC17-215ENST00000534417 SNAPC4Q5SXM2 1469 aa15.65■□□□□ 0.1
TTC17-215ENST00000534417 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.65■□□□□ 0.1
TTC17-215ENST00000534417 ZNF316A6NFI3 1004 aaPredicted RBP15.64■□□□□ 0.09
TTC17-215ENST00000534417 MRC2Q9UBG0 1479 aa15.63■□□□□ 0.09
TTC17-215ENST00000534417 FHOD3Q2V2M9 1422 aa15.62■□□□□ 0.09
TTC17-215ENST00000534417 ADAMTS12P58397 1594 aa15.61■□□□□ 0.09
TTC17-215ENST00000534417 DIEXFQ68CQ4 756 aaKnown RBP15.6■□□□□ 0.09
TTC17-215ENST00000534417 GRIN2BQ13224 1484 aa15.59■□□□□ 0.09
TTC17-215ENST00000534417 PHLDB1Q86UU1 1377 aa15.58■□□□□ 0.08
TTC17-215ENST00000534417 WDR62O43379 1518 aa15.58■□□□□ 0.08
TTC17-215ENST00000534417 LRRIQ1Q96JM4 1722 aa15.57■□□□□ 0.08
TTC17-215ENST00000534417 TDRD9Q8NDG6 1382 aaKnown RBP15.57■□□□□ 0.08
TTC17-215ENST00000534417 IFT140Q96RY7 1462 aa15.53■□□□□ 0.08
TTC17-215ENST00000534417 IQGAP2Q13576 1575 aa15.52■□□□□ 0.07
TTC17-215ENST00000534417 EHBP1L1Q8N3D4 1523 aa15.52■□□□□ 0.07
TTC17-215ENST00000534417 SETD5Q9C0A6 1442 aa15.51■□□□□ 0.07
TTC17-215ENST00000534417 ARHGEF11O15085 1522 aa15.51■□□□□ 0.07
TTC17-215ENST00000534417 MAPKBP1O60336 1514 aa15.51■□□□□ 0.07
TTC17-215ENST00000534417 CCDC18Q5T9S5 1454 aa15.5■□□□□ 0.07
TTC17-215ENST00000534417 RAB3GAP2Q9H2M9 1393 aa15.49■□□□□ 0.07
TTC17-215ENST00000534417 UGGT2Q9NYU1 1516 aa15.49■□□□□ 0.07
TTC17-215ENST00000534417 SUPT6HQ7KZ85 1726 aaKnown RBP15.49■□□□□ 0.07
TTC17-215ENST00000534417 HECW1Q76N89 1606 aa15.49■□□□□ 0.07
TTC17-215ENST00000534417 FGD6Q6ZV73 1430 aa15.48■□□□□ 0.07
TTC17-215ENST00000534417 P3H3Q8IVL6 736 aa15.42■□□□□ 0.06
TTC17-215ENST00000534417 MYOM3Q5VTT5 1437 aa15.42■□□□□ 0.06
TTC17-215ENST00000534417 TCOF1Q13428 1488 aaKnown RBP15.41■□□□□ 0.06
TTC17-215ENST00000534417 NCOA2Q15596 1464 aa15.41■□□□□ 0.06
TTC17-215ENST00000534417 EIF4G3O43432 1585 aaKnown RBP15.4■□□□□ 0.06
TTC17-215ENST00000534417 ACIN1Q9UKV3 1341 aaKnown RBP15.4■□□□□ 0.06
TTC17-215ENST00000534417 MTUS2Q5JR59 1369 aa15.39■□□□□ 0.05
TTC17-215ENST00000534417 KIAA0586Q9BVV6 1533 aa15.39■□□□□ 0.05
TTC17-215ENST00000534417 MAGI3Q5TCQ9 1506 aa15.38■□□□□ 0.05
TTC17-215ENST00000534417 HFM1A2PYH4 1435 aa15.38■□□□□ 0.05
TTC17-215ENST00000534417 TIMELESSQ9UNS1 1208 aa15.38■□□□□ 0.05
TTC17-215ENST00000534417 KIAA0556O60303 1618 aa15.37■□□□□ 0.05
TTC17-215ENST00000534417 PTPN23Q9H3S7 1636 aa15.37■□□□□ 0.05
TTC17-215ENST00000534417 AKNAQ7Z591 1439 aa15.36■□□□□ 0.05
TTC17-215ENST00000534417 MAGI1Q96QZ7 1491 aaPredicted RBP15.36■□□□□ 0.05
TTC17-215ENST00000534417 CENPBP07199 599 aaPredicted RBP15.36■□□□□ 0.05
TTC17-215ENST00000534417 EPRSP07814 1512 aaKnown RBP15.36■□□□□ 0.05
TTC17-215ENST00000534417 ZNF608Q9ULD9 1512 aaPredicted RBP15.36■□□□□ 0.05
TTC17-215ENST00000534417 GCC2Q8IWJ2 1684 aa15.35■□□□□ 0.05
TTC17-215ENST00000534417 SCAF1Q9H7N4 1312 aaKnown RBP15.35■□□□□ 0.05
TTC17-215ENST00000534417 GRIN2AQ12879 1464 aa15.34■□□□□ 0.05
TTC17-215ENST00000534417 DISP1Q96F81 1524 aa15.33■□□□□ 0.05
TTC17-215ENST00000534417 MIA2Q96PC5 1412 aa15.33■□□□□ 0.04
TTC17-215ENST00000534417 FAM50AQ14320 339 aaKnown RBP15.32■□□□□ 0.04
TTC17-215ENST00000534417 PTPRKQ15262 1439 aa15.3■□□□□ 0.04
TTC17-215ENST00000534417 UACAQ9BZF9 1416 aa15.3■□□□□ 0.04
TTC17-215ENST00000534417 ITGAEP38570 1179 aa15.29■□□□□ 0.04
TTC17-215ENST00000534417 RAPGEF6Q8TEU7 1601 aa15.28■□□□□ 0.04
TTC17-215ENST00000534417 NAIPQ13075 1403 aa15.28■□□□□ 0.04
TTC17-215ENST00000534417 NEUROD1Q13562 356 aa15.28■□□□□ 0.04
TTC17-215ENST00000534417 ATP1B4Q9UN42 357 aaPredicted RBP15.28■□□□□ 0.04
TTC17-215ENST00000534417 SYNJ2O15056 1496 aa15.27■□□□□ 0.04
TTC17-215ENST00000534417 MIER1Q8N108 512 aa15.26■□□□□ 0.03
TTC17-215ENST00000534417 CDK13Q14004 1512 aaKnown RBP15.25■□□□□ 0.03
TTC17-215ENST00000534417 CEP170Q5SW79 1584 aa15.24■□□□□ 0.03
TTC17-215ENST00000534417 ERCC6Q03468 1493 aa15.24■□□□□ 0.03
TTC17-215ENST00000534417 NUP160Q12769 1436 aa15.24■□□□□ 0.03
TTC17-215ENST00000534417 ADCY10Q96PN6 1610 aa15.24■□□□□ 0.03
TTC17-215ENST00000534417 NUP153P49790 1475 aaKnown RBP15.23■□□□□ 0.03
TTC17-215ENST00000534417 DNMT1P26358 1616 aaKnown RBP15.21■□□□□ 0.02
TTC17-215ENST00000534417 ITSN2Q9NZM3 1697 aa15.19■□□□□ 0.02
TTC17-215ENST00000534417 ROCK1Q13464 1354 aa15.18■□□□□ 0.02
TTC17-215ENST00000534417 FOXD1Q16676 465 aa15.17■□□□□ 0.02
TTC17-215ENST00000534417 KDM5BQ9UGL1 1544 aa15.15■□□□□ 0.02
TTC17-215ENST00000534417 PPP1R15AO75807 674 aaPredicted RBP15.14■□□□□ 0.01
TTC17-215ENST00000534417 TROQ12816 1431 aaPredicted RBP15.14■□□□□ 0.01
TTC17-215ENST00000534417 ABCA8O94911 1581 aa15.13■□□□□ 0.01
TTC17-215ENST00000534417 CARMIL2Q6F5E8 1435 aa15.12■□□□□ 0.01
TTC17-215ENST00000534417 DENND4BO75064 1496 aaPredicted RBP15.12■□□□□ 0.01
TTC17-215ENST00000534417 ADGBQ8N7X0 1667 aa15.12■□□□□ 0.01
TTC17-215ENST00000534417 DAPK1P53355 1430 aa15.11■□□□□ 0.01
TTC17-215ENST00000534417 SIN3AQ96ST3 1273 aa15.11■□□□□ 0.01
TTC17-215ENST00000534417 CROCC2H7BZ55 1655 aa15.11■□□□□ 0.01
TTC17-215ENST00000534417 KDM6BO15054 1643 aa15.1■□□□□ 0.01
TTC17-215ENST00000534417 CDK11AQ9UQ88 783 aaPredicted RBP15.08■□□□□ 0
TTC17-215ENST00000534417 ABCC5O15440 1437 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms