RNA–Protein interactions for RNA: ENST00000534300.5

AMBRA1-212, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 5,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-212ENST00000534300 MTUS2Q5JR59 1369 aa16.35■□□□□ 0.21
AMBRA1-212ENST00000534300 OSCARQ8IYS5 282 aa16.34■□□□□ 0.21
AMBRA1-212ENST00000534300 CUX2O14529 1486 aa16.34■□□□□ 0.21
AMBRA1-212ENST00000534300 ABCC8Q09428 1581 aa16.33■□□□□ 0.21
AMBRA1-212ENST00000534300 HSP90AA1P07900 732 aaKnown RBP16.33■□□□□ 0.21
AMBRA1-212ENST00000534300 EIF4G1Q04637 1599 aaKnown RBP16.33■□□□□ 0.2
AMBRA1-212ENST00000534300 CARMIL2Q6F5E8 1435 aa16.32■□□□□ 0.2
AMBRA1-212ENST00000534300 CCDC136Q96JN2 1154 aa16.31■□□□□ 0.2
AMBRA1-212ENST00000534300 CCDC88BA6NC98 1476 aa16.3■□□□□ 0.2
AMBRA1-212ENST00000534300 SMARCA4P51532 1647 aa16.3■□□□□ 0.2
AMBRA1-212ENST00000534300 TOP2AP11388 1531 aaKnown RBP16.29■□□□□ 0.2
AMBRA1-212ENST00000534300 CHGAP10645 457 aaKnown RBP16.29■□□□□ 0.2
AMBRA1-212ENST00000534300 NCAPD3P42695 1498 aa16.29■□□□□ 0.2
AMBRA1-212ENST00000534300 CARMIL1Q5VZK9 1371 aa16.27■□□□□ 0.19
AMBRA1-212ENST00000534300 NEFMP07197 916 aa16.27■□□□□ 0.19
AMBRA1-212ENST00000534300 TDRD9Q8NDG6 1382 aaKnown RBP16.26■□□□□ 0.19
AMBRA1-212ENST00000534300 FANCD2Q9BXW9 1451 aa16.25■□□□□ 0.19
AMBRA1-212ENST00000534300 DDX10Q13206 875 aaKnown RBP16.24■□□□□ 0.19
AMBRA1-212ENST00000534300 BCL11AQ9H165 835 aa16.23■□□□□ 0.19
AMBRA1-212ENST00000534300 GOLGA3Q08378 1498 aa16.21■□□□□ 0.19
AMBRA1-212ENST00000534300 CLIP1P30622 1438 aa16.19■□□□□ 0.18
AMBRA1-212ENST00000534300 FAM9BQ8IZU0 186 aa16.19■□□□□ 0.18
AMBRA1-212ENST00000534300 MIER1Q8N108 512 aa16.19■□□□□ 0.18
AMBRA1-212ENST00000534300 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.18■□□□□ 0.182e-7■■□□□ 11.4
AMBRA1-212ENST00000534300 TONSLQ96HA7 1378 aa16.16■□□□□ 0.18
AMBRA1-212ENST00000534300 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.16■□□□□ 0.18
AMBRA1-212ENST00000534300 CFDP1Q9UEE9 299 aaPredicted RBP16.15■□□□□ 0.18
AMBRA1-212ENST00000534300 CC2D2AQ9P2K1 1620 aa16.14■□□□□ 0.17
AMBRA1-212ENST00000534300 ERICH6BQ5W0A0 696 aa16.14■□□□□ 0.17
AMBRA1-212ENST00000534300 DDRGK1Q96HY6 314 aa16.13■□□□□ 0.17
AMBRA1-212ENST00000534300 TNNT2P45379 298 aaPredicted RBP16.12■□□□□ 0.17
AMBRA1-212ENST00000534300 ARXQ96QS3 562 aa16.12■□□□□ 0.17
AMBRA1-212ENST00000534300 WIZO95785 1651 aa16.11■□□□□ 0.17
AMBRA1-212ENST00000534300 PPP1R15AO75807 674 aaPredicted RBP16.11■□□□□ 0.17
AMBRA1-212ENST00000534300 TRIM44Q96DX7 344 aaPredicted RBP16.1■□□□□ 0.17
AMBRA1-212ENST00000534300 CYB5RLQ6IPT4 315 aa16.1■□□□□ 0.17
AMBRA1-212ENST00000534300 TMC1Q8TDI8 760 aa16.08■□□□□ 0.16
AMBRA1-212ENST00000534300 CHIC2Q9UKJ5 165 aa16.07■□□□□ 0.16
AMBRA1-212ENST00000534300 PPM1GO15355 546 aaPredicted RBP16.07■□□□□ 0.16
AMBRA1-212ENST00000534300 FHAD1B1AJZ9 1412 aa16.06■□□□□ 0.16
AMBRA1-212ENST00000534300 JPH4Q96JJ6 628 aa16.06■□□□□ 0.16
AMBRA1-212ENST00000534300 BECN1Q14457 450 aa16.05■□□□□ 0.16
AMBRA1-212ENST00000534300 MRS2Q9HD23 443 aa16.05■□□□□ 0.16
AMBRA1-212ENST00000534300 DNAJC5BQ9UF47 199 aa16.03■□□□□ 0.16
AMBRA1-212ENST00000534300 SLC24A1O60721 1099 aa16.03■□□□□ 0.16
AMBRA1-212ENST00000534300 IRX6P78412 446 aaPredicted RBP16.03■□□□□ 0.16
AMBRA1-212ENST00000534300 C14orf37Q86TY3 774 aa16.02■□□□□ 0.16
AMBRA1-212ENST00000534300 SALL2Q9Y467 1007 aaPredicted RBP16■□□□□ 0.15
AMBRA1-212ENST00000534300 CCNB3Q8WWL7 1395 aa15.99■□□□□ 0.15
AMBRA1-212ENST00000534300 MRC2Q9UBG0 1479 aa15.99■□□□□ 0.15
AMBRA1-212ENST00000534300 HMGXB3Q12766 1538 aa15.98■□□□□ 0.15
AMBRA1-212ENST00000534300 EFCAB2Q5VUJ9 269 aa15.98■□□□□ 0.15
AMBRA1-212ENST00000534300 AEBP2Q6ZN18 517 aaPredicted RBP15.97■□□□□ 0.15
AMBRA1-212ENST00000534300 TNIKQ9UKE5 1360 aa15.96■□□□□ 0.15
AMBRA1-212ENST00000534300 HDGFP51858 240 aaKnown RBP15.96■□□□□ 0.15
AMBRA1-212ENST00000534300 GOLGA6L22H0YM25 854 aa15.96■□□□□ 0.14
AMBRA1-212ENST00000534300 MLECQ14165 292 aa15.93■□□□□ 0.14
AMBRA1-212ENST00000534300 NAP1L5Q96NT1 182 aaPredicted RBP15.92■□□□□ 0.14
AMBRA1-212ENST00000534300 NOP58Q9Y2X3 529 aaKnown RBP15.92■□□□□ 0.14
AMBRA1-212ENST00000534300 PTPRGP23470 1445 aa15.91■□□□□ 0.14
AMBRA1-212ENST00000534300 KANK1Q14678 1352 aa15.91■□□□□ 0.14
AMBRA1-212ENST00000534300 RTN4Q9NQC3 1192 aaKnown RBP15.91■□□□□ 0.14
AMBRA1-212ENST00000534300 GAPVD1Q14C86 1478 aa15.91■□□□□ 0.14
AMBRA1-212ENST00000534300 RAPGEF2Q9Y4G8 1499 aa15.9■□□□□ 0.14
AMBRA1-212ENST00000534300 WDR43Q15061 677 aaKnown RBP eCLIP15.9■□□□□ 0.14
AMBRA1-212ENST00000534300 CEP162Q5TB80 1403 aa15.89■□□□□ 0.14
AMBRA1-212ENST00000534300 FMN1Q68DA7 1419 aa15.89■□□□□ 0.14
AMBRA1-212ENST00000534300 NCLP19338 710 aaKnown RBP15.88■□□□□ 0.13
AMBRA1-212ENST00000534300 IFT140Q96RY7 1462 aa15.88■□□□□ 0.13
AMBRA1-212ENST00000534300 PPP4R2Q9NY27 417 aa15.87■□□□□ 0.13
AMBRA1-212ENST00000534300 SUPT16HQ9Y5B9 1047 aaKnown RBP15.87■□□□□ 0.13
AMBRA1-212ENST00000534300 FGD5Q6ZNL6 1462 aa15.85■□□□□ 0.13
AMBRA1-212ENST00000534300 RRP7BPQ9NSQ0 103 aa15.85■□□□□ 0.13
AMBRA1-212ENST00000534300 CFTRP13569 1480 aa15.85■□□□□ 0.13
AMBRA1-212ENST00000534300 BICRAQ9NZM4 1560 aa15.84■□□□□ 0.13
AMBRA1-212ENST00000534300 DEKP35659 375 aaKnown RBP15.84■□□□□ 0.13
AMBRA1-212ENST00000534300 PTMAP06454 111 aaKnown RBP15.84■□□□□ 0.13
AMBRA1-212ENST00000534300 GRIN2BQ13224 1484 aa15.83■□□□□ 0.12
AMBRA1-212ENST00000534300 NESP48681 1621 aa15.82■□□□□ 0.12
AMBRA1-212ENST00000534300 EIF4G2P78344 907 aaKnown RBP eCLIP15.82■□□□□ 0.126e-7■■■□□ 18.8
AMBRA1-212ENST00000534300 DNTTIP2Q5QJE6 756 aaKnown RBP15.82■□□□□ 0.12
AMBRA1-212ENST00000534300 HAP1P54257 671 aaPredicted RBP15.82■□□□□ 0.12
AMBRA1-212ENST00000534300 LAS1LQ9Y4W2 734 aaKnown RBP15.81■□□□□ 0.12
AMBRA1-212ENST00000534300 MYH16Q9H6N6 1097 aa15.8■□□□□ 0.12
AMBRA1-212ENST00000534300 CDK11BP21127 795 aaKnown RBP15.8■□□□□ 0.12
AMBRA1-212ENST00000534300 FAM69CQ0P6D2 419 aa15.79■□□□□ 0.12
AMBRA1-212ENST00000534300 AQRO60306 1485 aaKnown RBP eCLIP15.79■□□□□ 0.125e-7■■■■■ 29
AMBRA1-212ENST00000534300 LAMC3Q9Y6N6 1575 aa15.78■□□□□ 0.12
AMBRA1-212ENST00000534300 GGT6Q6P531 493 aa15.78■□□□□ 0.12
AMBRA1-212ENST00000534300 RSPH4AQ5TD94 716 aa15.77■□□□□ 0.12
AMBRA1-212ENST00000534300 RAD54L2Q9Y4B4 1467 aa15.76■□□□□ 0.11
AMBRA1-212ENST00000534300 HIRIP3Q9BW71 556 aaPredicted RBP15.75■□□□□ 0.11
AMBRA1-212ENST00000534300 RBM19Q9Y4C8 960 aaKnown RBP15.74■□□□□ 0.11
AMBRA1-212ENST00000534300 KDM2AQ9Y2K7 1162 aa15.74■□□□□ 0.11
AMBRA1-212ENST00000534300 L1TD1Q5T7N2 865 aaKnown RBP15.72■□□□□ 0.11
AMBRA1-212ENST00000534300 SPAG9O60271 1321 aaKnown RBP15.7■□□□□ 0.1
AMBRA1-212ENST00000534300 CCDC18Q5T9S5 1454 aa15.68■□□□□ 0.1
AMBRA1-212ENST00000534300 RGL3Q3MIN7 710 aa15.66■□□□□ 0.1
AMBRA1-212ENST00000534300 TOPBP1Q92547 1522 aa15.66■□□□□ 0.1
AMBRA1-212ENST00000534300 EID1Q9Y6B2 187 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms