RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 TDRD9Q8NDG6 1382 aaKnown RBP17.12■□□□□ 0.33
RAD50-209ENST00000533482 PLPPR3Q6T4P5 718 aa17.11■□□□□ 0.33
RAD50-209ENST00000533482 SALL2Q9Y467 1007 aaPredicted RBP17.1■□□□□ 0.33
RAD50-209ENST00000533482 TOP2AP11388 1531 aaKnown RBP17.1■□□□□ 0.33
RAD50-209ENST00000533482 ATAD2BQ9ULI0 1458 aa17.09■□□□□ 0.33
RAD50-209ENST00000533482 NPM1P06748 294 aaKnown RBP eCLIP17.08■□□□□ 0.33
RAD50-209ENST00000533482 SENP3-EIF4A1A0A087X0R7 540 aa17.08■□□□□ 0.32
RAD50-209ENST00000533482 IRX6P78412 446 aaPredicted RBP17.08■□□□□ 0.32
RAD50-209ENST00000533482 PLEKHD1A6NEE1 506 aa17.07■□□□□ 0.32
RAD50-209ENST00000533482 SMARCA2P51531 1590 aa17.06■□□□□ 0.32
RAD50-209ENST00000533482 CLSPNQ9HAW4 1339 aa17.06■□□□□ 0.32
RAD50-209ENST00000533482 CFDP1Q9UEE9 299 aaPredicted RBP17.05■□□□□ 0.32
RAD50-209ENST00000533482 VPS8Q8N3P4 1428 aa17.04■□□□□ 0.32
RAD50-209ENST00000533482 ERCC6Q03468 1493 aa17.04■□□□□ 0.32
RAD50-209ENST00000533482 RGL3Q3MIN7 710 aa17.03■□□□□ 0.32
RAD50-209ENST00000533482 SMARCA4P51532 1647 aa17.03■□□□□ 0.32
RAD50-209ENST00000533482 CCNB3Q8WWL7 1395 aa17.02■□□□□ 0.32
RAD50-209ENST00000533482 BCL11AQ9H165 835 aa17■□□□□ 0.31
RAD50-209ENST00000533482 MRS2Q9HD23 443 aa17■□□□□ 0.31
RAD50-209ENST00000533482 RAPGEF2Q9Y4G8 1499 aa16.98■□□□□ 0.31
RAD50-209ENST00000533482 EIF4G1Q04637 1599 aaKnown RBP16.98■□□□□ 0.31
RAD50-209ENST00000533482 CADPSQ9ULU8 1353 aa16.97■□□□□ 0.31
RAD50-209ENST00000533482 EIF4G2P78344 907 aaKnown RBP eCLIP16.96■□□□□ 0.31
RAD50-209ENST00000533482 RTL5Q5HYW3 569 aaPredicted RBP16.93■□□□□ 0.3
RAD50-209ENST00000533482 STAG3Q9UJ98 1225 aa16.92■□□□□ 0.3
RAD50-209ENST00000533482 TMC1Q8TDI8 760 aa16.91■□□□□ 0.3
RAD50-209ENST00000533482 FOXD1Q16676 465 aa16.9■□□□□ 0.3
RAD50-209ENST00000533482 FHAD1B1AJZ9 1412 aa16.88■□□□□ 0.29
RAD50-209ENST00000533482 ESF1Q9H501 851 aaKnown RBP16.88■□□□□ 0.29
RAD50-209ENST00000533482 NPM2Q86SE8 214 aaKnown RBP16.87■□□□□ 0.29
RAD50-209ENST00000533482 SLC24A1O60721 1099 aa16.86■□□□□ 0.29
RAD50-209ENST00000533482 FHOD3Q2V2M9 1422 aa16.84■□□□□ 0.29
RAD50-209ENST00000533482 PDS5BQ9NTI5 1447 aa16.84■□□□□ 0.29
RAD50-209ENST00000533482 CANXP27824 592 aaKnown RBP16.83■□□□□ 0.28
RAD50-209ENST00000533482 SUPT16HQ9Y5B9 1047 aaKnown RBP16.82■□□□□ 0.28
RAD50-209ENST00000533482 RAB3GAP2Q9H2M9 1393 aa16.82■□□□□ 0.28
RAD50-209ENST00000533482 SETD5Q9C0A6 1442 aa16.78■□□□□ 0.28
RAD50-209ENST00000533482 CCDC136Q96JN2 1154 aa16.78■□□□□ 0.28
RAD50-209ENST00000533482 CARD11Q9BXL7 1154 aa16.75■□□□□ 0.27
RAD50-209ENST00000533482 FANCD2Q9BXW9 1451 aa16.74■□□□□ 0.27
RAD50-209ENST00000533482 ANP32AP39687 249 aaKnown RBP16.73■□□□□ 0.27
RAD50-209ENST00000533482 ARHGAP35Q9NRY4 1499 aa16.71■□□□□ 0.27
RAD50-209ENST00000533482 NEFMP07197 916 aa16.7■□□□□ 0.26
RAD50-209ENST00000533482 RAD54L2Q9Y4B4 1467 aa16.7■□□□□ 0.26
RAD50-209ENST00000533482 DCAF11Q8TEB1 546 aa16.7■□□□□ 0.26
RAD50-209ENST00000533482 IGF1RP08069 1367 aa16.69■□□□□ 0.26
RAD50-209ENST00000533482 DHX57Q6P158 1386 aaKnown RBP16.69■□□□□ 0.26
RAD50-209ENST00000533482 PLEKHG5O94827 1062 aa16.67■□□□□ 0.26
RAD50-209ENST00000533482 HSPA5P11021 654 aaKnown RBP16.67■□□□□ 0.26
RAD50-209ENST00000533482 PPP1R15AO75807 674 aaPredicted RBP16.66■□□□□ 0.26
RAD50-209ENST00000533482 PKD2Q13563 968 aa16.66■□□□□ 0.26
RAD50-209ENST00000533482 FMN1Q68DA7 1419 aa16.65■□□□□ 0.26
RAD50-209ENST00000533482 JPH4Q96JJ6 628 aa16.65■□□□□ 0.26
RAD50-209ENST00000533482 WDR43Q15061 677 aaKnown RBP eCLIP16.64■□□□□ 0.25
RAD50-209ENST00000533482 FGD5Q6ZNL6 1462 aa16.64■□□□□ 0.25
RAD50-209ENST00000533482 NBR1Q14596 966 aa16.63■□□□□ 0.25
RAD50-209ENST00000533482 MPHOSPH9Q99550 1183 aa16.62■□□□□ 0.25
RAD50-209ENST00000533482 DNAJC5BQ9UF47 199 aa16.62■□□□□ 0.25
RAD50-209ENST00000533482 TIMELESSQ9UNS1 1208 aa16.62■□□□□ 0.25
RAD50-209ENST00000533482 HNRNPMP52272 730 aaKnown RBP eCLIP16.61■□□□□ 0.25
RAD50-209ENST00000533482 NCAPD3P42695 1498 aa16.61■□□□□ 0.25
RAD50-209ENST00000533482 B4GALNT3Q6L9W6 998 aa16.58■□□□□ 0.24
RAD50-209ENST00000533482 TNNT2P45379 298 aaPredicted RBP16.57■□□□□ 0.24
RAD50-209ENST00000533482 CC2D1BQ5T0F9 858 aaKnown RBP16.57■□□□□ 0.24
RAD50-209ENST00000533482 NESP48681 1621 aa16.57■□□□□ 0.24
RAD50-209ENST00000533482 ARID4BQ4LE39 1312 aaPredicted RBP16.57■□□□□ 0.24
RAD50-209ENST00000533482 GGT6Q6P531 493 aa16.56■□□□□ 0.24
RAD50-209ENST00000533482 L3MBTL2Q969R5 705 aa16.56■□□□□ 0.24
RAD50-209ENST00000533482 ZBTB47Q9UFB7 747 aaPredicted RBP16.56■□□□□ 0.24
RAD50-209ENST00000533482 CARMIL2Q6F5E8 1435 aa16.56■□□□□ 0.24
RAD50-209ENST00000533482 MLECQ14165 292 aa16.56■□□□□ 0.24
RAD50-209ENST00000533482 SYNJ1O43426 1573 aa16.55■□□□□ 0.24
RAD50-209ENST00000533482 NUP155O75694 1391 aa16.54■□□□□ 0.24
RAD50-209ENST00000533482 NEUROD2Q15784 382 aa16.53■□□□□ 0.24
RAD50-209ENST00000533482 CCER2I3L3R5 266 aa16.53■□□□□ 0.24
RAD50-209ENST00000533482 KNSTRNQ9Y448 316 aa16.52■□□□□ 0.24
RAD50-209ENST00000533482 AQRO60306 1485 aaKnown RBP eCLIP16.52■□□□□ 0.239e-10■■■■■ 36.7
RAD50-209ENST00000533482 SAFB2Q14151 953 aaKnown RBP eCLIP16.51■□□□□ 0.23
RAD50-209ENST00000533482 PPM1GO15355 546 aaPredicted RBP16.51■□□□□ 0.23
RAD50-209ENST00000533482 ZNF644Q9H582 1327 aaPredicted RBP16.5■□□□□ 0.23
RAD50-209ENST00000533482 KIF21BO75037 1637 aa16.49■□□□□ 0.23
RAD50-209ENST00000533482 GAPVD1Q14C86 1478 aa16.49■□□□□ 0.23
RAD50-209ENST00000533482 PPP4R2Q9NY27 417 aa16.46■□□□□ 0.23
RAD50-209ENST00000533482 ARAP1Q96P48 1450 aa16.45■□□□□ 0.22
RAD50-209ENST00000533482 PHLDB1Q86UU1 1377 aa16.45■□□□□ 0.22
RAD50-209ENST00000533482 EFCAB2Q5VUJ9 269 aa16.45■□□□□ 0.22
RAD50-209ENST00000533482 CFTRP13569 1480 aa16.44■□□□□ 0.22
RAD50-209ENST00000533482 ZBTB7CA1YPR0 619 aa16.43■□□□□ 0.22
RAD50-209ENST00000533482 C14orf37Q86TY3 774 aa16.43■□□□□ 0.22
RAD50-209ENST00000533482 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.43■□□□□ 0.22
RAD50-209ENST00000533482 KIF3BO15066 747 aa16.42■□□□□ 0.22
RAD50-209ENST00000533482 ANP32EQ9BTT0 268 aa16.41■□□□□ 0.22
RAD50-209ENST00000533482 ANKRD30AQ9BXX3 1397 aa16.41■□□□□ 0.22
RAD50-209ENST00000533482 RBM19Q9Y4C8 960 aaKnown RBP16.4■□□□□ 0.22
RAD50-209ENST00000533482 BICRAQ9NZM4 1560 aa16.4■□□□□ 0.22
RAD50-209ENST00000533482 POGKQ9P215 609 aa16.4■□□□□ 0.22
RAD50-209ENST00000533482 NUTM2DQ5VT03 806 aaPredicted RBP16.4■□□□□ 0.22
RAD50-209ENST00000533482 TSHZ2Q9NRE2 1034 aa16.39■□□□□ 0.21
RAD50-209ENST00000533482 STK26Q9P289 416 aa16.39■□□□□ 0.21
RAD50-209ENST00000533482 CDCA8Q53HL2 280 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms