RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 NISCHQ9Y2I1 1504 aa22.56■■□□□ 1.2
RAD50-209ENST00000533482 DCAF8L2P0C7V8 631 aa22.38■■□□□ 1.17
RAD50-209ENST00000533482 SUPT5HO00267 1087 aaKnown RBP21.39■■□□□ 1.01
RAD50-209ENST00000533482 SHROOM4Q9ULL8 1493 aa21.37■■□□□ 1.01
RAD50-209ENST00000533482 EHMT2Q96KQ7 1210 aa20.57■□□□□ 0.88
RAD50-209ENST00000533482 FAM9AQ8IZU1 332 aaPredicted RBP20.12■□□□□ 0.81
RAD50-209ENST00000533482 PCGF6Q9BYE7 350 aa19.94■□□□□ 0.78
RAD50-209ENST00000533482 TTBK1Q5TCY1 1321 aaPredicted RBP19.77■□□□□ 0.76
RAD50-209ENST00000533482 TRIM41Q8WV44 630 aa19.66■□□□□ 0.74
RAD50-209ENST00000533482 RANGAP1P46060 587 aaPredicted RBP19.6■□□□□ 0.73
RAD50-209ENST00000533482 CHIC1Q5VXU3 224 aa19.46■□□□□ 0.71
RAD50-209ENST00000533482 LOC105371045A0A1W2PR82 267 aa19.43■□□□□ 0.7
RAD50-209ENST00000533482 APLP2Q06481 763 aa19.39■□□□□ 0.69
RAD50-209ENST00000533482 PPARGC1BQ86YN6 1023 aaKnown RBP19.36■□□□□ 0.69
RAD50-209ENST00000533482 ABCC9O60706 1549 aa19.33■□□□□ 0.69
RAD50-209ENST00000533482 UBTFP17480 764 aaKnown RBP19.27■□□□□ 0.68
RAD50-209ENST00000533482 PABPN1Q86U42 306 aaKnown RBP eCLIP19.16■□□□□ 0.66
RAD50-209ENST00000533482 CCER1Q8TC90 406 aaPredicted RBP19.13■□□□□ 0.65
RAD50-209ENST00000533482 ATP1B4Q9UN42 357 aaPredicted RBP19.11■□□□□ 0.65
RAD50-209ENST00000533482 HRCP23327 699 aa19.1■□□□□ 0.65
RAD50-209ENST00000533482 TRIM26Q12899 539 aaPredicted RBP19.03■□□□□ 0.64
RAD50-209ENST00000533482 ZEB1P37275 1124 aaPredicted RBP18.98■□□□□ 0.63
RAD50-209ENST00000533482 ZCCHC6Q5VYS8 1495 aaKnown RBP18.72■□□□□ 0.59
RAD50-209ENST00000533482 ITGAEP38570 1179 aa18.69■□□□□ 0.58
RAD50-209ENST00000533482 YTHDC1Q96MU7 727 aaKnown RBP18.68■□□□□ 0.58
RAD50-209ENST00000533482 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.65■□□□□ 0.58
RAD50-209ENST00000533482 CENPBP07199 599 aaPredicted RBP18.65■□□□□ 0.58
RAD50-209ENST00000533482 HNRNPUL2Q1KMD3 747 aaKnown RBP18.63■□□□□ 0.57
RAD50-209ENST00000533482 SCRIBQ14160 1630 aa18.57■□□□□ 0.56
RAD50-209ENST00000533482 PELP1Q8IZL8 1130 aaKnown RBP18.48■□□□□ 0.55
RAD50-209ENST00000533482 CCDC180Q9P1Z9 1646 aa18.39■□□□□ 0.53
RAD50-209ENST00000533482 MYO15BQ96JP2 1530 aa18.34■□□□□ 0.53
RAD50-209ENST00000533482 DIEXFQ68CQ4 756 aaKnown RBP18.25■□□□□ 0.51
RAD50-209ENST00000533482 CSRNP3Q8WYN3 585 aa18.24■□□□□ 0.51
RAD50-209ENST00000533482 P3H3Q8IVL6 736 aa18.19■□□□□ 0.5
RAD50-209ENST00000533482 FAM50AQ14320 339 aaKnown RBP18.17■□□□□ 0.5
RAD50-209ENST00000533482 CNGB1Q14028 1251 aaPredicted RBP18.14■□□□□ 0.49
RAD50-209ENST00000533482 RSF1Q96T23 1441 aaPredicted RBP18.11■□□□□ 0.49
RAD50-209ENST00000533482 ARID3CA6NKF2 412 aa18.09■□□□□ 0.49
RAD50-209ENST00000533482 POLR3GLQ9BT43 218 aa18.09■□□□□ 0.49
RAD50-209ENST00000533482 FBLN2P98095 1184 aa18.08■□□□□ 0.49
RAD50-209ENST00000533482 MYT1LQ9UL68 1186 aa18.08■□□□□ 0.48
RAD50-209ENST00000533482 DCAF1Q9Y4B6 1507 aa18.05■□□□□ 0.48
RAD50-209ENST00000533482 NEFLP07196 543 aa18■□□□□ 0.47
RAD50-209ENST00000533482 NEUROD1Q13562 356 aa17.99■□□□□ 0.47
RAD50-209ENST00000533482 CECR2Q9BXF3 1484 aa17.96■□□□□ 0.47
RAD50-209ENST00000533482 GTF3C3Q9Y5Q9 886 aa17.92■□□□□ 0.46
RAD50-209ENST00000533482 TRIM52Q96A61 297 aa17.9■□□□□ 0.46
RAD50-209ENST00000533482 RB1CC1Q8TDY2 1594 aa17.89■□□□□ 0.46
RAD50-209ENST00000533482 ZNF316A6NFI3 1004 aaPredicted RBP17.89■□□□□ 0.45
RAD50-209ENST00000533482 ERICH6Q7L0X2 663 aa17.82■□□□□ 0.44
RAD50-209ENST00000533482 NACADO15069 1562 aa17.81■□□□□ 0.44
RAD50-209ENST00000533482 ACIN1Q9UKV3 1341 aaKnown RBP17.74■□□□□ 0.43
RAD50-209ENST00000533482 ZNF326Q5BKZ1 582 aaKnown RBP17.73■□□□□ 0.43
RAD50-209ENST00000533482 BCANQ96GW7 911 aa17.69■□□□□ 0.42
RAD50-209ENST00000533482 ZNF777Q9ULD5 760 aaPredicted RBP17.68■□□□□ 0.42
RAD50-209ENST00000533482 MROH2BQ7Z745 1585 aa17.64■□□□□ 0.42
RAD50-209ENST00000533482 WRNQ14191 1432 aaPredicted RBP eCLIP17.62■□□□□ 0.41
RAD50-209ENST00000533482 BAZ1BQ9UIG0 1483 aaKnown RBP17.61■□□□□ 0.41
RAD50-209ENST00000533482 CEP162Q5TB80 1403 aa17.6■□□□□ 0.41
RAD50-209ENST00000533482 CLIP1P30622 1438 aa17.59■□□□□ 0.41
RAD50-209ENST00000533482 CHIC2Q9UKJ5 165 aa17.57■□□□□ 0.4
RAD50-209ENST00000533482 SLC4A1APQ9BWU0 796 aaKnown RBP17.56■□□□□ 0.4
RAD50-209ENST00000533482 BAZ1AQ9NRL2 1556 aaPredicted RBP17.56■□□□□ 0.4
RAD50-209ENST00000533482 SCAF1Q9H7N4 1312 aaKnown RBP17.54■□□□□ 0.4
RAD50-209ENST00000533482 SOGA1O94964 1423 aa17.53■□□□□ 0.4
RAD50-209ENST00000533482 ANP32CO43423 234 aa17.51■□□□□ 0.39
RAD50-209ENST00000533482 MIER1Q8N108 512 aa17.51■□□□□ 0.39
RAD50-209ENST00000533482 DDX10Q13206 875 aaKnown RBP17.47■□□□□ 0.39
RAD50-209ENST00000533482 HIRIP3Q9BW71 556 aaPredicted RBP17.45■□□□□ 0.38
RAD50-209ENST00000533482 ABCC8Q09428 1581 aa17.44■□□□□ 0.38
RAD50-209ENST00000533482 CCDC88BA6NC98 1476 aa17.43■□□□□ 0.38
RAD50-209ENST00000533482 TNIKQ9UKE5 1360 aa17.43■□□□□ 0.38
RAD50-209ENST00000533482 GOLGA3Q08378 1498 aa17.43■□□□□ 0.38
RAD50-209ENST00000533482 CDK11AQ9UQ88 783 aaPredicted RBP17.42■□□□□ 0.38
RAD50-209ENST00000533482 CHMP7Q8WUX9 453 aaPredicted RBP17.4■□□□□ 0.38
RAD50-209ENST00000533482 WIZO95785 1651 aa17.38■□□□□ 0.37
RAD50-209ENST00000533482 EEA1Q15075 1411 aa17.37■□□□□ 0.37
RAD50-209ENST00000533482 MTUS2Q5JR59 1369 aa17.37■□□□□ 0.37
RAD50-209ENST00000533482 RRP7BPQ9NSQ0 103 aa17.33■□□□□ 0.37
RAD50-209ENST00000533482 KIF27Q86VH2 1401 aa17.33■□□□□ 0.36
RAD50-209ENST00000533482 MYT1Q01538 1121 aa17.33■□□□□ 0.36
RAD50-209ENST00000533482 TONSLQ96HA7 1378 aa17.31■□□□□ 0.36
RAD50-209ENST00000533482 CEP164Q9UPV0 1460 aa17.29■□□□□ 0.36
RAD50-209ENST00000533482 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.28■□□□□ 0.365e-9■■■■□ 19.3
RAD50-209ENST00000533482 FKBP8Q14318 412 aa17.26■□□□□ 0.35
RAD50-209ENST00000533482 CUX2O14529 1486 aa17.21■□□□□ 0.35
RAD50-209ENST00000533482 KCNH8Q96L42 1107 aa17.21■□□□□ 0.34
RAD50-209ENST00000533482 HNRNPUQ00839 825 aaKnown RBP eCLIP17.2■□□□□ 0.34
RAD50-209ENST00000533482 SIN3AQ96ST3 1273 aa17.19■□□□□ 0.34
RAD50-209ENST00000533482 KDM2AQ9Y2K7 1162 aa17.19■□□□□ 0.34
RAD50-209ENST00000533482 KANK4Q5T7N3 995 aaPredicted RBP17.19■□□□□ 0.34
RAD50-209ENST00000533482 CHGAP10645 457 aaKnown RBP17.18■□□□□ 0.34
RAD50-209ENST00000533482 FAM9BQ8IZU0 186 aa17.17■□□□□ 0.34
RAD50-209ENST00000533482 CARMIL1Q5VZK9 1371 aa17.17■□□□□ 0.34
RAD50-209ENST00000533482 TSPY4P0CV99 314 aa17.15■□□□□ 0.34
RAD50-209ENST00000533482 TSPY10P0CW01 314 aa17.15■□□□□ 0.34
RAD50-209ENST00000533482 RUSC2Q8N2Y8 1516 aa17.15■□□□□ 0.34
RAD50-209ENST00000533482 SENP3Q9H4L4 574 aaPredicted RBP17.14■□□□□ 0.33
RAD50-209ENST00000533482 DAXXQ9UER7 740 aaPredicted RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms