RNA–Protein interactions for RNA: ENST00000531616.1

ARHGEF12-211, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

TSL 3

Gene ARHGEF12, Length 3,108 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-211ENST00000531616 ATXN8OSP0DMR3 200 aa12.72□□□□□ -0.37
ARHGEF12-211ENST00000531616 ZMYND15Q9H091 742 aa12.69□□□□□ -0.38
ARHGEF12-211ENST00000531616 FOXD4L5Q5VV16 416 aaPredicted RBP12.68□□□□□ -0.38
ARHGEF12-211ENST00000531616 FOXD4L4Q8WXT5 416 aaPredicted RBP12.68□□□□□ -0.38
ARHGEF12-211ENST00000531616 APBB1O00213 710 aa12.65□□□□□ -0.38
ARHGEF12-211ENST00000531616 RAD21O60216 631 aa12.65□□□□□ -0.38
ARHGEF12-211ENST00000531616 KCTD17Q8N5Z5 321 aa12.65□□□□□ -0.38
ARHGEF12-211ENST00000531616 RSPH6AQ9H0K4 717 aa12.65□□□□□ -0.38
ARHGEF12-211ENST00000531616 MYCNP04198 464 aaPredicted RBP12.64□□□□□ -0.39
ARHGEF12-211ENST00000531616 LMOD2Q6P5Q4 547 aa12.64□□□□□ -0.39
ARHGEF12-211ENST00000531616 SLC24A3Q9HC58 644 aa12.61□□□□□ -0.39
ARHGEF12-211ENST00000531616 MTMR7Q9Y216 660 aa12.61□□□□□ -0.39
ARHGEF12-211ENST00000531616 RBM25P49756 843 aaKnown RBP12.6□□□□□ -0.39
ARHGEF12-211ENST00000531616 TRIM41Q8WV44 630 aa12.58□□□□□ -0.4
ARHGEF12-211ENST00000531616 FAM9AQ8IZU1 332 aaPredicted RBP12.57□□□□□ -0.4
ARHGEF12-211ENST00000531616 SPDYE4A6NLX3 237 aa12.57□□□□□ -0.4
ARHGEF12-211ENST00000531616 RB1CC1Q8TDY2 1594 aa12.56□□□□□ -0.4
ARHGEF12-211ENST00000531616 POLR3GLQ9BT43 218 aa12.55□□□□□ -0.4
ARHGEF12-211ENST00000531616 HSP90B1P14625 803 aaKnown RBP12.53□□□□□ -0.4
ARHGEF12-211ENST00000531616 AEBP1Q8IUX7 1158 aa12.53□□□□□ -0.4
ARHGEF12-211ENST00000531616 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.52□□□□□ -0.4
ARHGEF12-211ENST00000531616 UNC13AQ9UPW8 1703 aa12.5□□□□□ -0.41
ARHGEF12-211ENST00000531616 GPBP1L1Q9HC44 474 aaPredicted RBP12.5□□□□□ -0.41
ARHGEF12-211ENST00000531616 DNAJC5BQ9UF47 199 aa12.48□□□□□ -0.41
ARHGEF12-211ENST00000531616 IL27Q8NEV9 243 aa12.46□□□□□ -0.42
ARHGEF12-211ENST00000531616 NKX1-1Q15270 411 aaPredicted RBP12.45□□□□□ -0.42
ARHGEF12-211ENST00000531616 RGS22Q8NE09 1264 aa12.44□□□□□ -0.42
ARHGEF12-211ENST00000531616 UBE2Q2Q8WVN8 375 aa12.44□□□□□ -0.42
ARHGEF12-211ENST00000531616 CCDC82Q8N4S0 544 aa12.43□□□□□ -0.42
ARHGEF12-211ENST00000531616 USP35Q9P2H5 1018 aa12.41□□□□□ -0.42
ARHGEF12-211ENST00000531616 MKRN3Q13064 507 aaKnown RBP12.4□□□□□ -0.42
ARHGEF12-211ENST00000531616 ZC3H15Q8WU90 426 aaKnown RBP12.38□□□□□ -0.43
ARHGEF12-211ENST00000531616 BRD2P25440 801 aaKnown RBP12.35□□□□□ -0.43
ARHGEF12-211ENST00000531616 KCNV2Q8TDN2 545 aa12.35□□□□□ -0.43
ARHGEF12-211ENST00000531616 PUS7Q96PZ0 661 aaKnown RBP12.34□□□□□ -0.43
ARHGEF12-211ENST00000531616 SPOCK2Q92563 424 aa12.33□□□□□ -0.44
ARHGEF12-211ENST00000531616 PDE4CQ08493 712 aa12.31□□□□□ -0.44
ARHGEF12-211ENST00000531616 IRX6P78412 446 aaPredicted RBP12.31□□□□□ -0.44
ARHGEF12-211ENST00000531616 RNF216Q9NWF9 866 aaPredicted RBP12.31□□□□□ -0.44
ARHGEF12-211ENST00000531616 PROM2Q8N271 834 aa12.29□□□□□ -0.44
ARHGEF12-211ENST00000531616 HMGB1P09429 215 aaKnown RBP12.28□□□□□ -0.44
ARHGEF12-211ENST00000531616 MFAP1P55081 439 aaKnown RBP12.28□□□□□ -0.44
ARHGEF12-211ENST00000531616 SCAF1Q9H7N4 1312 aaKnown RBP12.26□□□□□ -0.45
ARHGEF12-211ENST00000531616 GTPBP6O43824 516 aaPredicted RBP12.26□□□□□ -0.45
ARHGEF12-211ENST00000531616 GZF1Q9H116 711 aaPredicted RBP12.26□□□□□ -0.45
ARHGEF12-211ENST00000531616 ZNF692Q9BU19 519 aaPredicted RBP12.25□□□□□ -0.45
ARHGEF12-211ENST00000531616 CIZ1Q9ULV3 898 aaPredicted RBP12.25□□□□□ -0.45
ARHGEF12-211ENST00000531616 TMCO4Q5TGY1 634 aa12.24□□□□□ -0.45
ARHGEF12-211ENST00000531616 MKRN4PQ13434 485 aaPredicted RBP12.23□□□□□ -0.45
ARHGEF12-211ENST00000531616 CLUAP1Q96AJ1 413 aa12.23□□□□□ -0.45
ARHGEF12-211ENST00000531616 RNF25Q96BH1 459 aaPredicted RBP12.22□□□□□ -0.45
ARHGEF12-211ENST00000531616 FAM177A1Q8N128 213 aaPredicted RBP12.21□□□□□ -0.46
ARHGEF12-211ENST00000531616 WDR70Q9NW82 654 aa12.2□□□□□ -0.46
ARHGEF12-211ENST00000531616 BICRAQ9NZM4 1560 aa12.19□□□□□ -0.46
ARHGEF12-211ENST00000531616 CWC22Q9HCG8 908 aaKnown RBP12.18□□□□□ -0.46
ARHGEF12-211ENST00000531616 HS6ST3Q8IZP7 471 aa12.15□□□□□ -0.46
ARHGEF12-211ENST00000531616 PPM1GO15355 546 aaPredicted RBP12.13□□□□□ -0.47
ARHGEF12-211ENST00000531616 BRPF3Q9ULD4 1205 aa12.13□□□□□ -0.47
ARHGEF12-211ENST00000531616 BCL11AQ9H165 835 aa12.13□□□□□ -0.47
ARHGEF12-211ENST00000531616 SEMA3EO15041 775 aa12.11□□□□□ -0.47
ARHGEF12-211ENST00000531616 IRF5Q13568 498 aa12.09□□□□□ -0.47
ARHGEF12-211ENST00000531616 RETREG2Q8NC44 543 aa12.07□□□□□ -0.48
ARHGEF12-211ENST00000531616 BCL11BQ9C0K0 894 aaPredicted RBP12.07□□□□□ -0.48
ARHGEF12-211ENST00000531616 E9PSI1 815 aa12.06□□□□□ -0.48
ARHGEF12-211ENST00000531616 ZFP91Q96JP5 570 aaPredicted RBP12.06□□□□□ -0.48
ARHGEF12-211ENST00000531616 CADPS2Q86UW7 1296 aa12.06□□□□□ -0.48
ARHGEF12-211ENST00000531616 ZNF777Q9ULD5 760 aaPredicted RBP12.06□□□□□ -0.48
ARHGEF12-211ENST00000531616 TAF7LQ5H9L4 462 aa12.06□□□□□ -0.48
ARHGEF12-211ENST00000531616 KDM4CQ9H3R0 1056 aa12.04□□□□□ -0.48
ARHGEF12-211ENST00000531616 P3H3Q8IVL6 736 aa12.03□□□□□ -0.48
ARHGEF12-211ENST00000531616 ZNF316A6NFI3 1004 aaPredicted RBP12.03□□□□□ -0.48
ARHGEF12-211ENST00000531616 FBXW7Q969H0 707 aa12.02□□□□□ -0.48
ARHGEF12-211ENST00000531616 ABCC9O60706 1549 aa12.01□□□□□ -0.49
ARHGEF12-211ENST00000531616 ZNF526Q8TF50 670 aaPredicted RBP12.01□□□□□ -0.49
ARHGEF12-211ENST00000531616 FAM117AQ9C073 453 aa12.01□□□□□ -0.49
ARHGEF12-211ENST00000531616 TMED8Q6PL24 325 aaPredicted RBP12.01□□□□□ -0.49
ARHGEF12-211ENST00000531616 PEG3Q9GZU2 1588 aa12.01□□□□□ -0.49
ARHGEF12-211ENST00000531616 ZNF592Q92610 1267 aa12□□□□□ -0.49
ARHGEF12-211ENST00000531616 A0A0U1RQG5 324 aaPredicted RBP11.99□□□□□ -0.49
ARHGEF12-211ENST00000531616 CCDC136Q96JN2 1154 aa11.99□□□□□ -0.49
ARHGEF12-211ENST00000531616 POLA2Q14181 598 aa11.98□□□□□ -0.49
ARHGEF12-211ENST00000531616 PLCD3Q8N3E9 789 aa11.97□□□□□ -0.49
ARHGEF12-211ENST00000531616 ZMYND10O75800 440 aa11.97□□□□□ -0.49
ARHGEF12-211ENST00000531616 TRAIPQ9BWF2 469 aa11.96□□□□□ -0.49
ARHGEF12-211ENST00000531616 ZNF219Q9P2Y4 722 aaPredicted RBP11.96□□□□□ -0.49
ARHGEF12-211ENST00000531616 CERS3Q8IU89 383 aa11.95□□□□□ -0.5
ARHGEF12-211ENST00000531616 STK25O00506 426 aa11.94□□□□□ -0.5
ARHGEF12-211ENST00000531616 CARNS1A5YM72 827 aa11.93□□□□□ -0.5
ARHGEF12-211ENST00000531616 TRAK2O60296 914 aa11.92□□□□□ -0.5
ARHGEF12-211ENST00000531616 KDM4AO75164 1064 aa11.91□□□□□ -0.5
ARHGEF12-211ENST00000531616 MYT1LQ9UL68 1186 aa11.9□□□□□ -0.5
ARHGEF12-211ENST00000531616 ARID4BQ4LE39 1312 aaPredicted RBP11.9□□□□□ -0.51
ARHGEF12-211ENST00000531616 SMARCA2P51531 1590 aa11.88□□□□□ -0.51
ARHGEF12-211ENST00000531616 SMARCA5O60264 1052 aaPredicted RBP11.85□□□□□ -0.51
ARHGEF12-211ENST00000531616 POM121Q96HA1 1249 aa11.84□□□□□ -0.51
ARHGEF12-211ENST00000531616 UNCXA6NJT0 531 aa11.84□□□□□ -0.51
ARHGEF12-211ENST00000531616 HOXD11P31277 338 aaPredicted RBP11.82□□□□□ -0.52
ARHGEF12-211ENST00000531616 ONECUT3O60422 494 aaPredicted RBP11.82□□□□□ -0.52
ARHGEF12-211ENST00000531616 MIER1Q8N108 512 aa11.82□□□□□ -0.52
ARHGEF12-211ENST00000531616 SCRIBQ14160 1630 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms