RNA–Protein interactions for RNA: ENST00000531616.1

ARHGEF12-211, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

TSL 3

Gene ARHGEF12, Length 3,108 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-211ENST00000531616 CHIC1Q5VXU3 224 aa18.25■□□□□ 0.51
ARHGEF12-211ENST00000531616 SLC24A1O60721 1099 aa17.76■□□□□ 0.43
ARHGEF12-211ENST00000531616 AEBP2Q6ZN18 517 aaPredicted RBP17.54■□□□□ 0.4
ARHGEF12-211ENST00000531616 EHMT2Q96KQ7 1210 aa17.5■□□□□ 0.39
ARHGEF12-211ENST00000531616 PLPPR3Q6T4P5 718 aa16.88■□□□□ 0.29
ARHGEF12-211ENST00000531616 PHF23Q9BUL5 403 aaPredicted RBP16.7■□□□□ 0.26
ARHGEF12-211ENST00000531616 RTN4Q9NQC3 1192 aaKnown RBP16.52■□□□□ 0.24
ARHGEF12-211ENST00000531616 CSRNP3Q8WYN3 585 aa16.12■□□□□ 0.17
ARHGEF12-211ENST00000531616 KCNA4P22459 653 aa16.11■□□□□ 0.17
ARHGEF12-211ENST00000531616 PRKCSHP14314 528 aaPredicted RBP15.85■□□□□ 0.13
ARHGEF12-211ENST00000531616 AMER1Q5JTC6 1135 aaPredicted RBP15.72■□□□□ 0.11
ARHGEF12-211ENST00000531616 NCBP3Q53F19 620 aaKnown RBP15.68■□□□□ 0.1
ARHGEF12-211ENST00000531616 DAXXQ9UER7 740 aaPredicted RBP15.59■□□□□ 0.09
ARHGEF12-211ENST00000531616 SLC4A1APQ9BWU0 796 aaKnown RBP15.33■□□□□ 0.04
ARHGEF12-211ENST00000531616 ADRA2BP18089 450 aa15.25■□□□□ 0.03
ARHGEF12-211ENST00000531616 TIMELESSQ9UNS1 1208 aa15.23■□□□□ 0.03
ARHGEF12-211ENST00000531616 NISCHQ9Y2I1 1504 aa15.12■□□□□ 0.01
ARHGEF12-211ENST00000531616 TULP1O00294 542 aaPredicted RBP15.04■□□□□ -0
ARHGEF12-211ENST00000531616 TAOK2Q9UL54 1235 aa15.03■□□□□ -0
ARHGEF12-211ENST00000531616 ZBTB22O15209 634 aa14.99□□□□□ -0.01
ARHGEF12-211ENST00000531616 TPRNQ4KMQ1 711 aa14.92□□□□□ -0.02
ARHGEF12-211ENST00000531616 ARXQ96QS3 562 aa14.77□□□□□ -0.05
ARHGEF12-211ENST00000531616 BCANQ96GW7 911 aa14.7□□□□□ -0.06
ARHGEF12-211ENST00000531616 HAP1P54257 671 aaPredicted RBP14.69□□□□□ -0.06
ARHGEF12-211ENST00000531616 PLCB2Q00722 1185 aa14.66□□□□□ -0.06
ARHGEF12-211ENST00000531616 FKBP8Q14318 412 aa14.49□□□□□ -0.09
ARHGEF12-211ENST00000531616 KLHL34Q8N239 644 aa14.49□□□□□ -0.09
ARHGEF12-211ENST00000531616 NPM3O75607 178 aaKnown RBP14.45□□□□□ -0.1
ARHGEF12-211ENST00000531616 PODXL2Q9NZ53 605 aa14.45□□□□□ -0.1
ARHGEF12-211ENST00000531616 HOMEZQ8IX15 550 aa14.44□□□□□ -0.1
ARHGEF12-211ENST00000531616 GTF3C3Q9Y5Q9 886 aa14.41□□□□□ -0.1
ARHGEF12-211ENST00000531616 PPP6R1Q9UPN7 881 aa14.39□□□□□ -0.11
ARHGEF12-211ENST00000531616 RANGAP1P46060 587 aaPredicted RBP14.36□□□□□ -0.11
ARHGEF12-211ENST00000531616 APLP2Q06481 763 aa14.35□□□□□ -0.11
ARHGEF12-211ENST00000531616 FBLN2P98095 1184 aa14.25□□□□□ -0.13
ARHGEF12-211ENST00000531616 KDM2AQ9Y2K7 1162 aa14.24□□□□□ -0.13
ARHGEF12-211ENST00000531616 DCAF8L2P0C7V8 631 aa14.19□□□□□ -0.14
ARHGEF12-211ENST00000531616 SUPT5HO00267 1087 aaKnown RBP14.09□□□□□ -0.15
ARHGEF12-211ENST00000531616 PPP4R3CPQ6ZMV5 832 aa14.08□□□□□ -0.16
ARHGEF12-211ENST00000531616 TMEM132AQ24JP5 1023 aa14.06□□□□□ -0.16
ARHGEF12-211ENST00000531616 ERICH6Q7L0X2 663 aa14.04□□□□□ -0.16
ARHGEF12-211ENST00000531616 C14orf37Q86TY3 774 aa14.04□□□□□ -0.16
ARHGEF12-211ENST00000531616 PELP1Q8IZL8 1130 aaKnown RBP14.01□□□□□ -0.17
ARHGEF12-211ENST00000531616 CCDC180Q9P1Z9 1646 aa13.96□□□□□ -0.17
ARHGEF12-211ENST00000531616 NPM2Q86SE8 214 aaKnown RBP13.96□□□□□ -0.17
ARHGEF12-211ENST00000531616 VSIG10Q8N0Z9 540 aa13.96□□□□□ -0.17
ARHGEF12-211ENST00000531616 SENP3Q9H4L4 574 aaPredicted RBP13.93□□□□□ -0.18
ARHGEF12-211ENST00000531616 TRIM26Q12899 539 aaPredicted RBP13.92□□□□□ -0.18
ARHGEF12-211ENST00000531616 UBTFP17480 764 aaKnown RBP13.86□□□□□ -0.19
ARHGEF12-211ENST00000531616 FOXD4L1Q9NU39 408 aa13.83□□□□□ -0.2
ARHGEF12-211ENST00000531616 TTBK1Q5TCY1 1321 aaPredicted RBP13.78□□□□□ -0.2
ARHGEF12-211ENST00000531616 EIF5BO60841 1220 aaKnown RBP13.74□□□□□ -0.21
ARHGEF12-211ENST00000531616 HRCP23327 699 aa13.72□□□□□ -0.21
ARHGEF12-211ENST00000531616 CFAP44Q96MT7 982 aa13.68□□□□□ -0.22
ARHGEF12-211ENST00000531616 PAXIP1Q6ZW49 1069 aaPredicted RBP13.65□□□□□ -0.22
ARHGEF12-211ENST00000531616 LOC105371045A0A1W2PR82 267 aa13.61□□□□□ -0.23
ARHGEF12-211ENST00000531616 PLEKHG5O94827 1062 aa13.6□□□□□ -0.23
ARHGEF12-211ENST00000531616 TSHZ2Q9NRE2 1034 aa13.6□□□□□ -0.23
ARHGEF12-211ENST00000531616 MYT1Q01538 1121 aa13.55□□□□□ -0.24
ARHGEF12-211ENST00000531616 NPM1P06748 294 aaKnown RBP eCLIP13.48□□□□□ -0.25
ARHGEF12-211ENST00000531616 TRHP20396 242 aaPredicted RBP13.47□□□□□ -0.25
ARHGEF12-211ENST00000531616 NBR1Q14596 966 aa13.46□□□□□ -0.26
ARHGEF12-211ENST00000531616 PKD2Q13563 968 aa13.4□□□□□ -0.26
ARHGEF12-211ENST00000531616 ARID3AQ99856 593 aa13.38□□□□□ -0.27
ARHGEF12-211ENST00000531616 FBXO3Q9UK99 471 aa13.37□□□□□ -0.27
ARHGEF12-211ENST00000531616 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.29□□□□□ -0.28
ARHGEF12-211ENST00000531616 IFNLR1Q8IU57 520 aaPredicted RBP13.21□□□□□ -0.29
ARHGEF12-211ENST00000531616 FOXD1Q16676 465 aa13.21□□□□□ -0.3
ARHGEF12-211ENST00000531616 MYO15BQ96JP2 1530 aa13.2□□□□□ -0.3
ARHGEF12-211ENST00000531616 IGSF3O75054 1194 aa13.18□□□□□ -0.3
ARHGEF12-211ENST00000531616 BBXQ8WY36 941 aaPredicted RBP13.15□□□□□ -0.3
ARHGEF12-211ENST00000531616 DCAF1Q9Y4B6 1507 aa13.07□□□□□ -0.32
ARHGEF12-211ENST00000531616 SPRYD3Q8NCJ5 442 aa13.07□□□□□ -0.32
ARHGEF12-211ENST00000531616 BRPF1P55201 1214 aaPredicted RBP13.04□□□□□ -0.32
ARHGEF12-211ENST00000531616 NECTIN2Q92692 538 aa13.03□□□□□ -0.32
ARHGEF12-211ENST00000531616 VASPP50552 380 aaPredicted RBP13.02□□□□□ -0.32
ARHGEF12-211ENST00000531616 CNKSR2Q8WXI2 1034 aa13.02□□□□□ -0.32
ARHGEF12-211ENST00000531616 SLC4A2P04920 1241 aa13.02□□□□□ -0.33
ARHGEF12-211ENST00000531616 CHMP4AQ9BY43 222 aa13.01□□□□□ -0.33
ARHGEF12-211ENST00000531616 C1orf115Q9H7X2 142 aa13.01□□□□□ -0.33
ARHGEF12-211ENST00000531616 ARID3CA6NKF2 412 aa12.98□□□□□ -0.33
ARHGEF12-211ENST00000531616 ZNF428Q96B54 188 aa12.95□□□□□ -0.34
ARHGEF12-211ENST00000531616 RGL2O15211 777 aa12.94□□□□□ -0.34
ARHGEF12-211ENST00000531616 ATF5Q9Y2D1 282 aaPredicted RBP12.92□□□□□ -0.34
ARHGEF12-211ENST00000531616 SHROOM4Q9ULL8 1493 aa12.92□□□□□ -0.34
ARHGEF12-211ENST00000531616 CCDC9Q9Y3X0 531 aaKnown RBP12.9□□□□□ -0.34
ARHGEF12-211ENST00000531616 DHX37Q8IY37 1157 aaKnown RBP12.9□□□□□ -0.34
ARHGEF12-211ENST00000531616 ECM2O94769 699 aaPredicted RBP12.88□□□□□ -0.35
ARHGEF12-211ENST00000531616 PIAS4Q8N2W9 510 aaPredicted RBP12.87□□□□□ -0.35
ARHGEF12-211ENST00000531616 MAPK8IP2Q13387 824 aaPredicted RBP12.86□□□□□ -0.35
ARHGEF12-211ENST00000531616 SAMD1Q6SPF0 538 aaPredicted RBP12.86□□□□□ -0.35
ARHGEF12-211ENST00000531616 NEUROD2Q15784 382 aa12.84□□□□□ -0.35
ARHGEF12-211ENST00000531616 CDK11BP21127 795 aaKnown RBP12.83□□□□□ -0.36
ARHGEF12-211ENST00000531616 CDK11AQ9UQ88 783 aaPredicted RBP12.83□□□□□ -0.36
ARHGEF12-211ENST00000531616 CHGAP10645 457 aaKnown RBP12.82□□□□□ -0.36
ARHGEF12-211ENST00000531616 DNAJC5Q9H3Z4 198 aa12.82□□□□□ -0.36
ARHGEF12-211ENST00000531616 ZCCHC6Q5VYS8 1495 aaKnown RBP12.82□□□□□ -0.36
ARHGEF12-211ENST00000531616 ZBTB7CA1YPR0 619 aa12.76□□□□□ -0.37
ARHGEF12-211ENST00000531616 PDIA4P13667 645 aaKnown RBP12.73□□□□□ -0.37
ARHGEF12-211ENST00000531616 NACADO15069 1562 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms