RNA–Protein interactions for RNA: ENST00000530853.5

NIN-216, Transcript of ninein, humanhuman

TSL 5

Gene NIN, Length 5,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-216ENST00000530853 POLA1P09884 1462 aaPredicted RBP9.36□□□□□ -0.91
NIN-216ENST00000530853 CUX1P39880 1505 aa9.35□□□□□ -0.91
NIN-216ENST00000530853 FKBP8Q14318 412 aa9.35□□□□□ -0.91
NIN-216ENST00000530853 SLC4A1APQ9BWU0 796 aaKnown RBP9.35□□□□□ -0.91
NIN-216ENST00000530853 KIF21AQ7Z4S6 1674 aa9.35□□□□□ -0.91
NIN-216ENST00000530853 RAD54L2Q9Y4B4 1467 aa9.34□□□□□ -0.91
NIN-216ENST00000530853 EEA1Q15075 1411 aa9.33□□□□□ -0.92
NIN-216ENST00000530853 CDK11AQ9UQ88 783 aaPredicted RBP9.33□□□□□ -0.92
NIN-216ENST00000530853 ANP32CO43423 234 aa9.33□□□□□ -0.92
NIN-216ENST00000530853 WDR62O43379 1518 aa9.33□□□□□ -0.92
NIN-216ENST00000530853 ANP32EQ9BTT0 268 aa9.32□□□□□ -0.92
NIN-216ENST00000530853 STAG3Q9UJ98 1225 aa9.32□□□□□ -0.92
NIN-216ENST00000530853 CEP162Q5TB80 1403 aa9.32□□□□□ -0.92
NIN-216ENST00000530853 TOP2BQ02880 1626 aa9.31□□□□□ -0.92
NIN-216ENST00000530853 PRDM2Q13029 1718 aa9.3□□□□□ -0.92
NIN-216ENST00000530853 GAPVD1Q14C86 1478 aa9.3□□□□□ -0.92
NIN-216ENST00000530853 AQRO60306 1485 aaKnown RBP eCLIP9.3□□□□□ -0.92
NIN-216ENST00000530853 RTL5Q5HYW3 569 aaPredicted RBP9.29□□□□□ -0.92
NIN-216ENST00000530853 SYNJ1O43426 1573 aa9.29□□□□□ -0.92
NIN-216ENST00000530853 FAM50AQ14320 339 aaKnown RBP9.29□□□□□ -0.92
NIN-216ENST00000530853 HAP1P54257 671 aaPredicted RBP9.28□□□□□ -0.92
NIN-216ENST00000530853 CARMIL1Q5VZK9 1371 aa9.28□□□□□ -0.92
NIN-216ENST00000530853 OSCARQ8IYS5 282 aa9.28□□□□□ -0.92
NIN-216ENST00000530853 SUPT16HQ9Y5B9 1047 aaKnown RBP9.28□□□□□ -0.92
NIN-216ENST00000530853 GRIN2BQ13224 1484 aa9.28□□□□□ -0.92
NIN-216ENST00000530853 POLR3GLQ9BT43 218 aa9.27□□□□□ -0.93
NIN-216ENST00000530853 ABCA10Q8WWZ4 1543 aa9.27□□□□□ -0.93
NIN-216ENST00000530853 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.26□□□□□ -0.934e-7■■■■□ 23.1
NIN-216ENST00000530853 THOC2Q8NI27 1593 aaKnown RBP9.26□□□□□ -0.93
NIN-216ENST00000530853 C14orf37Q86TY3 774 aa9.26□□□□□ -0.93
NIN-216ENST00000530853 ZNF608Q9ULD9 1512 aaPredicted RBP9.24□□□□□ -0.93
NIN-216ENST00000530853 TNIKQ9UKE5 1360 aa9.24□□□□□ -0.93
NIN-216ENST00000530853 IGF1RP08069 1367 aa9.23□□□□□ -0.93
NIN-216ENST00000530853 DDX10Q13206 875 aaKnown RBP9.23□□□□□ -0.93
NIN-216ENST00000530853 CNGB1Q14028 1251 aaPredicted RBP9.23□□□□□ -0.93
NIN-216ENST00000530853 BIVM-ERCC5R4GMW8 1640 aa9.23□□□□□ -0.93
NIN-216ENST00000530853 A0A0G2JS52 829 aa9.22□□□□□ -0.93
NIN-216ENST00000530853 NEFMP07197 916 aa9.22□□□□□ -0.93
NIN-216ENST00000530853 GOLGA3Q08378 1498 aa9.21□□□□□ -0.94
NIN-216ENST00000530853 FHAD1B1AJZ9 1412 aa9.21□□□□□ -0.94
NIN-216ENST00000530853 DAXXQ9UER7 740 aaPredicted RBP9.21□□□□□ -0.94
NIN-216ENST00000530853 CLIP1P30622 1438 aa9.2□□□□□ -0.94
NIN-216ENST00000530853 TRIM52Q96A61 297 aa9.2□□□□□ -0.94
NIN-216ENST00000530853 SF3B2Q13435 895 aaKnown RBP9.19□□□□□ -0.94
NIN-216ENST00000530853 BCL11AQ9H165 835 aa9.19□□□□□ -0.94
NIN-216ENST00000530853 MAGI1Q96QZ7 1491 aaPredicted RBP9.19□□□□□ -0.94
NIN-216ENST00000530853 SNAPC4Q5SXM2 1469 aa9.18□□□□□ -0.94
NIN-216ENST00000530853 RAPGEF2Q9Y4G8 1499 aa9.18□□□□□ -0.94
NIN-216ENST00000530853 JPH4Q96JJ6 628 aa9.15□□□□□ -0.94
NIN-216ENST00000530853 ERICH3Q5RHP9 1530 aa9.15□□□□□ -0.94
NIN-216ENST00000530853 SYNJ2O15056 1496 aa9.15□□□□□ -0.94
NIN-216ENST00000530853 HNRNPUQ00839 825 aaKnown RBP eCLIP9.15□□□□□ -0.94
NIN-216ENST00000530853 MEX3CQ5U5Q3 659 aaKnown RBP9.15□□□□□ -0.95
NIN-216ENST00000530853 WDR97A6NE52 1622 aa9.14□□□□□ -0.95
NIN-216ENST00000530853 TARBP1Q13395 1621 aaKnown RBP9.14□□□□□ -0.95
NIN-216ENST00000530853 TSHZ2Q9NRE2 1034 aa9.14□□□□□ -0.95
NIN-216ENST00000530853 P3H3Q8IVL6 736 aa9.14□□□□□ -0.95
NIN-216ENST00000530853 ZBTB47Q9UFB7 747 aaPredicted RBP9.13□□□□□ -0.95
NIN-216ENST00000530853 ANP32AP39687 249 aaKnown RBP9.13□□□□□ -0.95
NIN-216ENST00000530853 EIF4G3O43432 1585 aaKnown RBP9.13□□□□□ -0.95
NIN-216ENST00000530853 NPM2Q86SE8 214 aaKnown RBP9.12□□□□□ -0.95
NIN-216ENST00000530853 CARMIL2Q6F5E8 1435 aa9.12□□□□□ -0.95
NIN-216ENST00000530853 IRX6P78412 446 aaPredicted RBP9.11□□□□□ -0.95
NIN-216ENST00000530853 GRIN2AQ12879 1464 aa9.1□□□□□ -0.95
NIN-216ENST00000530853 TONSLQ96HA7 1378 aa9.1□□□□□ -0.95
NIN-216ENST00000530853 HIRIP3Q9BW71 556 aaPredicted RBP9.1□□□□□ -0.95
NIN-216ENST00000530853 NBR1Q14596 966 aa9.09□□□□□ -0.95
NIN-216ENST00000530853 PRXQ9BXM0 1461 aa9.09□□□□□ -0.95
NIN-216ENST00000530853 RBM19Q9Y4C8 960 aaKnown RBP9.07□□□□□ -0.96
NIN-216ENST00000530853 ABCA5Q8WWZ7 1642 aa9.07□□□□□ -0.96
NIN-216ENST00000530853 CUL7Q14999 1698 aa9.07□□□□□ -0.96
NIN-216ENST00000530853 KANK4Q5T7N3 995 aaPredicted RBP9.07□□□□□ -0.96
NIN-216ENST00000530853 KIAA0586Q9BVV6 1533 aa9.06□□□□□ -0.96
NIN-216ENST00000530853 CYB5RLQ6IPT4 315 aa9.06□□□□□ -0.96
NIN-216ENST00000530853 SLC24A1O60721 1099 aa9.05□□□□□ -0.96
NIN-216ENST00000530853 VPS8Q8N3P4 1428 aa9.05□□□□□ -0.96
NIN-216ENST00000530853 FAM9BQ8IZU0 186 aa9.05□□□□□ -0.96
NIN-216ENST00000530853 ZNF777Q9ULD5 760 aaPredicted RBP9.04□□□□□ -0.96
NIN-216ENST00000530853 DMRT2Q9Y5R5 561 aa9.04□□□□□ -0.96
NIN-216ENST00000530853 KIF21BO75037 1637 aa9.03□□□□□ -0.96
NIN-216ENST00000530853 ADAMTS12P58397 1594 aa9.03□□□□□ -0.96
NIN-216ENST00000530853 PTPRGP23470 1445 aa9.03□□□□□ -0.96
NIN-216ENST00000530853 PRG4Q92954 1404 aaPredicted RBP9.02□□□□□ -0.97
NIN-216ENST00000530853 NUP160Q12769 1436 aa9.01□□□□□ -0.97
NIN-216ENST00000530853 HDGFP51858 240 aaKnown RBP9.01□□□□□ -0.97
NIN-216ENST00000530853 ARID3CA6NKF2 412 aa9.01□□□□□ -0.97
NIN-216ENST00000530853 PBRM1Q86U86 1689 aa9.01□□□□□ -0.97
NIN-216ENST00000530853 CHGAP10645 457 aaKnown RBP9□□□□□ -0.97
NIN-216ENST00000530853 DNAJC5Q9H3Z4 198 aa9□□□□□ -0.97
NIN-216ENST00000530853 ZNF326Q5BKZ1 582 aaKnown RBP9□□□□□ -0.97
NIN-216ENST00000530853 CCDC136Q96JN2 1154 aa8.99□□□□□ -0.97
NIN-216ENST00000530853 ARAP1Q96P48 1450 aa8.99□□□□□ -0.97
NIN-216ENST00000530853 SIN3AQ96ST3 1273 aa8.99□□□□□ -0.97
NIN-216ENST00000530853 PPP1R15AO75807 674 aaPredicted RBP8.98□□□□□ -0.97
NIN-216ENST00000530853 TSPY4P0CV99 314 aa8.98□□□□□ -0.97
NIN-216ENST00000530853 TSPY10P0CW01 314 aa8.98□□□□□ -0.97
NIN-216ENST00000530853 MRS2Q9HD23 443 aa8.98□□□□□ -0.97
NIN-216ENST00000530853 PLEKHD1A6NEE1 506 aa8.97□□□□□ -0.97
NIN-216ENST00000530853 IQGAP2Q13576 1575 aa8.97□□□□□ -0.97
NIN-216ENST00000530853 FMN1Q68DA7 1419 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms