RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 OSCARQ8IYS5 282 aa10.61□□□□□ -0.71
ATPAF1-209ENST00000529214 TRIM41Q8WV44 630 aa10.6□□□□□ -0.71
ATPAF1-209ENST00000529214 GRIN2BQ13224 1484 aa10.6□□□□□ -0.71
ATPAF1-209ENST00000529214 FBLN2P98095 1184 aa10.57□□□□□ -0.72
ATPAF1-209ENST00000529214 CHMP7Q8WUX9 453 aaPredicted RBP10.56□□□□□ -0.72
ATPAF1-209ENST00000529214 ABCA5Q8WWZ7 1642 aa10.55□□□□□ -0.72
ATPAF1-209ENST00000529214 SNAPC4Q5SXM2 1469 aa10.55□□□□□ -0.72
ATPAF1-209ENST00000529214 MAGI1Q96QZ7 1491 aaPredicted RBP10.55□□□□□ -0.72
ATPAF1-209ENST00000529214 KIF27Q86VH2 1401 aa10.53□□□□□ -0.72
ATPAF1-209ENST00000529214 IGF1RP08069 1367 aa10.52□□□□□ -0.72
ATPAF1-209ENST00000529214 MYT1Q01538 1121 aa10.52□□□□□ -0.73
ATPAF1-209ENST00000529214 NCBP3Q53F19 620 aaKnown RBP10.52□□□□□ -0.73
ATPAF1-209ENST00000529214 ERICH3Q5RHP9 1530 aa10.52□□□□□ -0.73
ATPAF1-209ENST00000529214 SYNJ2O15056 1496 aa10.51□□□□□ -0.73
ATPAF1-209ENST00000529214 PBRM1Q86U86 1689 aa10.5□□□□□ -0.73
ATPAF1-209ENST00000529214 FHAD1B1AJZ9 1412 aa10.5□□□□□ -0.73
ATPAF1-209ENST00000529214 ZBTB22O15209 634 aa10.49□□□□□ -0.73
ATPAF1-209ENST00000529214 RUSC2Q8N2Y8 1516 aa10.47□□□□□ -0.73
ATPAF1-209ENST00000529214 CHD1O14646 1710 aa10.47□□□□□ -0.73
ATPAF1-209ENST00000529214 CARMIL1Q5VZK9 1371 aa10.45□□□□□ -0.74
ATPAF1-209ENST00000529214 ADAMTS12P58397 1594 aa10.45□□□□□ -0.74
ATPAF1-209ENST00000529214 GRIN2AQ12879 1464 aa10.45□□□□□ -0.74
ATPAF1-209ENST00000529214 NUP160Q12769 1436 aa10.42□□□□□ -0.74
ATPAF1-209ENST00000529214 DSG3P32926 999 aa10.41□□□□□ -0.74
ATPAF1-209ENST00000529214 CLASP1Q7Z460 1538 aa10.39□□□□□ -0.75
ATPAF1-209ENST00000529214 PELP1Q8IZL8 1130 aaKnown RBP10.39□□□□□ -0.75
ATPAF1-209ENST00000529214 CUL7Q14999 1698 aa10.39□□□□□ -0.75
ATPAF1-209ENST00000529214 CEP170Q5SW79 1584 aa10.38□□□□□ -0.75
ATPAF1-209ENST00000529214 JPH4Q96JJ6 628 aa10.37□□□□□ -0.75
ATPAF1-209ENST00000529214 EEA1Q15075 1411 aa10.37□□□□□ -0.75
ATPAF1-209ENST00000529214 FAM9AQ8IZU1 332 aaPredicted RBP10.36□□□□□ -0.75
ATPAF1-209ENST00000529214 RAPGEF2Q9Y4G8 1499 aa10.36□□□□□ -0.75
ATPAF1-209ENST00000529214 TTBK1Q5TCY1 1321 aaPredicted RBP10.36□□□□□ -0.75
ATPAF1-209ENST00000529214 ARHGEF11O15085 1522 aa10.35□□□□□ -0.75
ATPAF1-209ENST00000529214 PRXQ9BXM0 1461 aa10.35□□□□□ -0.75
ATPAF1-209ENST00000529214 CAPN15O75808 1086 aa10.35□□□□□ -0.75
ATPAF1-209ENST00000529214 KIAA0586Q9BVV6 1533 aa10.34□□□□□ -0.75
ATPAF1-209ENST00000529214 CYB5RLQ6IPT4 315 aa10.33□□□□□ -0.76
ATPAF1-209ENST00000529214 RIMBP3CA6NJZ7 1639 aa10.33□□□□□ -0.76
ATPAF1-209ENST00000529214 RIMBP3BA6NNM3 1639 aa10.33□□□□□ -0.76
ATPAF1-209ENST00000529214 RIMBP3Q9UFD9 1639 aa10.33□□□□□ -0.76
ATPAF1-209ENST00000529214 NPM3O75607 178 aaKnown RBP10.32□□□□□ -0.76
ATPAF1-209ENST00000529214 SPINK5Q9NQ38 1064 aaPredicted RBP10.3□□□□□ -0.76
ATPAF1-209ENST00000529214 U3KPZ7 1027 aaPredicted RBP10.3□□□□□ -0.76
ATPAF1-209ENST00000529214 PRG4Q92954 1404 aaPredicted RBP10.29□□□□□ -0.76
ATPAF1-209ENST00000529214 SHROOM2Q13796 1616 aa10.29□□□□□ -0.76
ATPAF1-209ENST00000529214 ARAP1Q96P48 1450 aa10.27□□□□□ -0.76
ATPAF1-209ENST00000529214 ERCC6L2Q5T890 1561 aa10.27□□□□□ -0.77
ATPAF1-209ENST00000529214 IQGAP2Q13576 1575 aa10.24□□□□□ -0.77
ATPAF1-209ENST00000529214 CARMIL2Q6F5E8 1435 aa10.22□□□□□ -0.77
ATPAF1-209ENST00000529214 UBTFP17480 764 aaKnown RBP10.22□□□□□ -0.77
ATPAF1-209ENST00000529214 KIF21BO75037 1637 aa10.21□□□□□ -0.77
ATPAF1-209ENST00000529214 UGGT2Q9NYU1 1516 aa10.21□□□□□ -0.77
ATPAF1-209ENST00000529214 DISP1Q96F81 1524 aa10.2□□□□□ -0.78
ATPAF1-209ENST00000529214 TNIKQ9UKE5 1360 aa10.2□□□□□ -0.78
ATPAF1-209ENST00000529214 PTPRGP23470 1445 aa10.19□□□□□ -0.78
ATPAF1-209ENST00000529214 GOLGA3Q08378 1498 aa10.18□□□□□ -0.78
ATPAF1-209ENST00000529214 FOXD4L1Q9NU39 408 aa10.18□□□□□ -0.78
ATPAF1-209ENST00000529214 CTTNBP2Q8WZ74 1663 aa10.18□□□□□ -0.78
ATPAF1-209ENST00000529214 PRKCSHP14314 528 aaPredicted RBP10.17□□□□□ -0.78
ATPAF1-209ENST00000529214 P3H3Q8IVL6 736 aa10.17□□□□□ -0.78
ATPAF1-209ENST00000529214 RANGAP1P46060 587 aaPredicted RBP10.16□□□□□ -0.78
ATPAF1-209ENST00000529214 KIAA0556O60303 1618 aa10.14□□□□□ -0.79
ATPAF1-209ENST00000529214 DAXXQ9UER7 740 aaPredicted RBP10.14□□□□□ -0.79
ATPAF1-209ENST00000529214 NPM1P06748 294 aaKnown RBP eCLIP10.13□□□□□ -0.79
ATPAF1-209ENST00000529214 FKBP8Q14318 412 aa10.13□□□□□ -0.79
ATPAF1-209ENST00000529214 BCANQ96GW7 911 aa10.13□□□□□ -0.79
ATPAF1-209ENST00000529214 UACAQ9BZF9 1416 aa10.12□□□□□ -0.79
ATPAF1-209ENST00000529214 LOC105371045A0A1W2PR82 267 aa10.1□□□□□ -0.79
ATPAF1-209ENST00000529214 PLCB2Q00722 1185 aa10.1□□□□□ -0.79
ATPAF1-209ENST00000529214 UHRF1BP1LA0JNW5 1464 aa10.09□□□□□ -0.79
ATPAF1-209ENST00000529214 SAMD9Q5K651 1589 aa10.09□□□□□ -0.79
ATPAF1-209ENST00000529214 TRHP20396 242 aaPredicted RBP10.09□□□□□ -0.79
ATPAF1-209ENST00000529214 TAOK2Q9UL54 1235 aa10.09□□□□□ -0.79
ATPAF1-209ENST00000529214 ADCY10Q96PN6 1610 aa10.08□□□□□ -0.8
ATPAF1-209ENST00000529214 PLB1Q6P1J6 1458 aa10.07□□□□□ -0.8
ATPAF1-209ENST00000529214 FHOD3Q2V2M9 1422 aa10.06□□□□□ -0.8
ATPAF1-209ENST00000529214 EFCAB5A4FU69 1503 aa10.06□□□□□ -0.8
ATPAF1-209ENST00000529214 ABCC2Q92887 1545 aa10.06□□□□□ -0.8
ATPAF1-209ENST00000529214 ARHGAP35Q9NRY4 1499 aa10.06□□□□□ -0.8
ATPAF1-209ENST00000529214 APLP2Q06481 763 aa10.05□□□□□ -0.8
ATPAF1-209ENST00000529214 KDM5BQ9UGL1 1544 aa10.05□□□□□ -0.8
ATPAF1-209ENST00000529214 ABCA8O94911 1581 aa10.04□□□□□ -0.8
ATPAF1-209ENST00000529214 ZNF219Q9P2Y4 722 aaPredicted RBP10.04□□□□□ -0.8
ATPAF1-209ENST00000529214 ABCB7O75027 752 aa10.03□□□□□ -0.8
ATPAF1-209ENST00000529214 MAPKBP1O60336 1514 aa10.02□□□□□ -0.8
ATPAF1-209ENST00000529214 CLIP1P30622 1438 aa10.02□□□□□ -0.8
ATPAF1-209ENST00000529214 FAM69CQ0P6D2 419 aa10.01□□□□□ -0.81
ATPAF1-209ENST00000529214 RBM42Q9BTD8 480 aaKnown RBP10.01□□□□□ -0.81
ATPAF1-209ENST00000529214 FMN1Q68DA7 1419 aa10.01□□□□□ -0.81
ATPAF1-209ENST00000529214 ASXL2Q76L83 1435 aa10.01□□□□□ -0.81
ATPAF1-209ENST00000529214 ATP10BO94823 1461 aa10.01□□□□□ -0.81
ATPAF1-209ENST00000529214 ARID3CA6NKF2 412 aa10□□□□□ -0.81
ATPAF1-209ENST00000529214 ERICH6Q7L0X2 663 aa9.99□□□□□ -0.81
ATPAF1-209ENST00000529214 ABCC10Q5T3U5 1492 aa9.99□□□□□ -0.81
ATPAF1-209ENST00000529214 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.98□□□□□ -0.81
ATPAF1-209ENST00000529214 HNRNPUL2Q1KMD3 747 aaKnown RBP9.98□□□□□ -0.81
ATPAF1-209ENST00000529214 ATP1B4Q9UN42 357 aaPredicted RBP9.98□□□□□ -0.81
ATPAF1-209ENST00000529214 RAPGEF6Q8TEU7 1601 aa9.98□□□□□ -0.81
ATPAF1-209ENST00000529214 NUP153P49790 1475 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms