RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 NESP48681 1621 aa10.81□□□□□ -0.68
C11orf54-207ENST00000528288 FHOD3Q2V2M9 1422 aa10.81□□□□□ -0.68
C11orf54-207ENST00000528288 DNAJC5BQ9UF47 199 aa10.8□□□□□ -0.68
C11orf54-207ENST00000528288 CLSPNQ9HAW4 1339 aa10.79□□□□□ -0.68
C11orf54-207ENST00000528288 FANCD2Q9BXW9 1451 aa10.79□□□□□ -0.68
C11orf54-207ENST00000528288 CC2D2AQ9P2K1 1620 aa10.78□□□□□ -0.68
C11orf54-207ENST00000528288 DDX10Q13206 875 aaKnown RBP10.76□□□□□ -0.69
C11orf54-207ENST00000528288 TIAM1Q13009 1591 aa10.76□□□□□ -0.69
C11orf54-207ENST00000528288 LRRC9Q6ZRR7 1453 aa10.76□□□□□ -0.69
C11orf54-207ENST00000528288 ARID3CA6NKF2 412 aa10.76□□□□□ -0.69
C11orf54-207ENST00000528288 SETD5Q9C0A6 1442 aa10.74□□□□□ -0.69
C11orf54-207ENST00000528288 TDRD9Q8NDG6 1382 aaKnown RBP10.74□□□□□ -0.69
C11orf54-207ENST00000528288 MAPKBP1O60336 1514 aa10.73□□□□□ -0.69
C11orf54-207ENST00000528288 PCF11O94913 1555 aaKnown RBP10.72□□□□□ -0.69
C11orf54-207ENST00000528288 POLA1P09884 1462 aaPredicted RBP10.72□□□□□ -0.69
C11orf54-207ENST00000528288 PRDM2Q13029 1718 aa10.7□□□□□ -0.7
C11orf54-207ENST00000528288 TOPBP1Q92547 1522 aa10.7□□□□□ -0.7
C11orf54-207ENST00000528288 FHAD1B1AJZ9 1412 aa10.69□□□□□ -0.7
C11orf54-207ENST00000528288 BCANQ96GW7 911 aa10.69□□□□□ -0.7
C11orf54-207ENST00000528288 SUPT16HQ9Y5B9 1047 aaKnown RBP10.69□□□□□ -0.7
C11orf54-207ENST00000528288 WDR97A6NE52 1622 aa10.68□□□□□ -0.7
C11orf54-207ENST00000528288 CHIC2Q9UKJ5 165 aa10.68□□□□□ -0.7
C11orf54-207ENST00000528288 MTUS2Q5JR59 1369 aa10.66□□□□□ -0.7
C11orf54-207ENST00000528288 DNMBPQ6XZF7 1577 aa10.65□□□□□ -0.71
C11orf54-207ENST00000528288 RRP7BPQ9NSQ0 103 aa10.64□□□□□ -0.71
C11orf54-207ENST00000528288 ABCA10Q8WWZ4 1543 aa10.64□□□□□ -0.71
C11orf54-207ENST00000528288 URB2Q14146 1524 aaKnown RBP10.63□□□□□ -0.71
C11orf54-207ENST00000528288 TRIM52Q96A61 297 aa10.63□□□□□ -0.71
C11orf54-207ENST00000528288 PPP1R15AO75807 674 aaPredicted RBP10.63□□□□□ -0.71
C11orf54-207ENST00000528288 PTPRKQ15262 1439 aa10.62□□□□□ -0.71
C11orf54-207ENST00000528288 MAP3K1Q13233 1512 aa10.62□□□□□ -0.71
C11orf54-207ENST00000528288 CASKIN1Q8WXD9 1431 aa10.62□□□□□ -0.71
C11orf54-207ENST00000528288 FGD6Q6ZV73 1430 aa10.6□□□□□ -0.71
C11orf54-207ENST00000528288 FYCO1Q9BQS8 1478 aa10.6□□□□□ -0.71
C11orf54-207ENST00000528288 CFAP43Q8NDM7 1665 aa10.6□□□□□ -0.71
C11orf54-207ENST00000528288 TONSLQ96HA7 1378 aa10.59□□□□□ -0.71
C11orf54-207ENST00000528288 FOXD1Q16676 465 aa10.58□□□□□ -0.71
C11orf54-207ENST00000528288 GAPVD1Q14C86 1478 aa10.58□□□□□ -0.72
C11orf54-207ENST00000528288 FMN1Q68DA7 1419 aa10.57□□□□□ -0.72
C11orf54-207ENST00000528288 FKBP8Q14318 412 aa10.57□□□□□ -0.72
C11orf54-207ENST00000528288 CCDC18Q5T9S5 1454 aa10.56□□□□□ -0.72
C11orf54-207ENST00000528288 AEBP2Q6ZN18 517 aaPredicted RBP10.56□□□□□ -0.72
C11orf54-207ENST00000528288 AQRO60306 1485 aaKnown RBP eCLIP10.56□□□□□ -0.72
C11orf54-207ENST00000528288 SNAPC4Q5SXM2 1469 aa10.56□□□□□ -0.72
C11orf54-207ENST00000528288 NCOA2Q15596 1464 aa10.55□□□□□ -0.72
C11orf54-207ENST00000528288 EFCAB5A4FU69 1503 aa10.55□□□□□ -0.72
C11orf54-207ENST00000528288 ANP32CO43423 234 aa10.55□□□□□ -0.72
C11orf54-207ENST00000528288 CTTNBP2Q8WZ74 1663 aa10.54□□□□□ -0.72
C11orf54-207ENST00000528288 CUL7Q14999 1698 aa10.53□□□□□ -0.72
C11orf54-207ENST00000528288 CNGB1Q14028 1251 aaPredicted RBP10.53□□□□□ -0.72
C11orf54-207ENST00000528288 LRRIQ1Q96JM4 1722 aa10.52□□□□□ -0.73
C11orf54-207ENST00000528288 NAIPQ13075 1403 aa10.51□□□□□ -0.73
C11orf54-207ENST00000528288 MYOM3Q5VTT5 1437 aa10.51□□□□□ -0.73
C11orf54-207ENST00000528288 TSHZ2Q9NRE2 1034 aa10.51□□□□□ -0.73
C11orf54-207ENST00000528288 PDS5BQ9NTI5 1447 aa10.51□□□□□ -0.73
C11orf54-207ENST00000528288 MAGI3Q5TCQ9 1506 aa10.5□□□□□ -0.73
C11orf54-207ENST00000528288 GRIN2BQ13224 1484 aa10.5□□□□□ -0.73
C11orf54-207ENST00000528288 HFM1A2PYH4 1435 aa10.5□□□□□ -0.73
C11orf54-207ENST00000528288 TIMELESSQ9UNS1 1208 aa10.49□□□□□ -0.73
C11orf54-207ENST00000528288 UACAQ9BZF9 1416 aa10.49□□□□□ -0.73
C11orf54-207ENST00000528288 ZNF644Q9H582 1327 aaPredicted RBP10.49□□□□□ -0.73
C11orf54-207ENST00000528288 PTPN23Q9H3S7 1636 aa10.49□□□□□ -0.73
C11orf54-207ENST00000528288 IRX6P78412 446 aaPredicted RBP10.48□□□□□ -0.73
C11orf54-207ENST00000528288 CDK13Q14004 1512 aaKnown RBP10.48□□□□□ -0.73
C11orf54-207ENST00000528288 KIF21AQ7Z4S6 1674 aa10.48□□□□□ -0.73
C11orf54-207ENST00000528288 ABCA5Q8WWZ7 1642 aa10.48□□□□□ -0.73
C11orf54-207ENST00000528288 HSPA5P11021 654 aaKnown RBP10.48□□□□□ -0.73
C11orf54-207ENST00000528288 LAMC3Q9Y6N6 1575 aa10.48□□□□□ -0.73
C11orf54-207ENST00000528288 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.48□□□□□ -0.73
C11orf54-207ENST00000528288 FBLN2P98095 1184 aa10.46□□□□□ -0.73
C11orf54-207ENST00000528288 SAMD9Q5K651 1589 aa10.46□□□□□ -0.73
C11orf54-207ENST00000528288 MPHOSPH9Q99550 1183 aa10.46□□□□□ -0.74
C11orf54-207ENST00000528288 HNRNPUQ00839 825 aaKnown RBP eCLIP10.45□□□□□ -0.74
C11orf54-207ENST00000528288 L3MBTL2Q969R5 705 aa10.45□□□□□ -0.74
C11orf54-207ENST00000528288 ZNF777Q9ULD5 760 aaPredicted RBP10.45□□□□□ -0.74
C11orf54-207ENST00000528288 KDM6BO15054 1643 aa10.45□□□□□ -0.74
C11orf54-207ENST00000528288 CCDC184Q52MB2 194 aa10.44□□□□□ -0.74
C11orf54-207ENST00000528288 SENP3-EIF4A1A0A087X0R7 540 aa10.44□□□□□ -0.74
C11orf54-207ENST00000528288 NEFLP07196 543 aa10.44□□□□□ -0.74
C11orf54-207ENST00000528288 WASHC2AQ641Q2 1341 aa10.44□□□□□ -0.74
C11orf54-207ENST00000528288 SUPT6HQ7KZ85 1726 aaKnown RBP10.44□□□□□ -0.74
C11orf54-207ENST00000528288 C11orf95C9JLR9 678 aaPredicted RBP10.43□□□□□ -0.74
C11orf54-207ENST00000528288 CCER2I3L3R5 266 aa10.43□□□□□ -0.74
C11orf54-207ENST00000528288 POLR3GLQ9BT43 218 aa10.43□□□□□ -0.74
C11orf54-207ENST00000528288 ZNF608Q9ULD9 1512 aaPredicted RBP10.43□□□□□ -0.74
C11orf54-207ENST00000528288 ZNF326Q5BKZ1 582 aaKnown RBP10.42□□□□□ -0.74
C11orf54-207ENST00000528288 EHBP1L1Q8N3D4 1523 aa10.42□□□□□ -0.74
C11orf54-207ENST00000528288 UGGT2Q9NYU1 1516 aa10.42□□□□□ -0.74
C11orf54-207ENST00000528288 EPRSP07814 1512 aaKnown RBP10.42□□□□□ -0.74
C11orf54-207ENST00000528288 DENND4BO75064 1496 aaPredicted RBP10.41□□□□□ -0.74
C11orf54-207ENST00000528288 TARBP1Q13395 1621 aaKnown RBP10.41□□□□□ -0.74
C11orf54-207ENST00000528288 THOC2Q8NI27 1593 aaKnown RBP10.41□□□□□ -0.74
C11orf54-207ENST00000528288 EIF4G2P78344 907 aaKnown RBP eCLIP10.4□□□□□ -0.74
C11orf54-207ENST00000528288 NBPF8Q3BBV2 869 aa10.4□□□□□ -0.74
C11orf54-207ENST00000528288 SLC4A1APQ9BWU0 796 aaKnown RBP10.4□□□□□ -0.74
C11orf54-207ENST00000528288 FAM9BQ8IZU0 186 aa10.4□□□□□ -0.75
C11orf54-207ENST00000528288 KDM5BQ9UGL1 1544 aa10.39□□□□□ -0.75
C11orf54-207ENST00000528288 IQGAP2Q13576 1575 aa10.38□□□□□ -0.75
C11orf54-207ENST00000528288 ARHGEF11O15085 1522 aa10.36□□□□□ -0.75
C11orf54-207ENST00000528288 PBRM1Q86U86 1689 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms