RNA–Protein interactions for RNA: ENST00000528021.5

SDHD-204, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 3 BASIC

Gene SDHD, Length 1,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-204ENST00000528021 WRNQ14191 1432 aaPredicted RBP eCLIP20.95■□□□□ 0.95
SDHD-204ENST00000528021 FBLN2P98095 1184 aa20.92■□□□□ 0.94
SDHD-204ENST00000528021 TARBP1Q13395 1621 aaKnown RBP20.88■□□□□ 0.93
SDHD-204ENST00000528021 CHMP7Q8WUX9 453 aaPredicted RBP20.83■□□□□ 0.93
SDHD-204ENST00000528021 EIF4G3O43432 1585 aaKnown RBP20.81■□□□□ 0.92
SDHD-204ENST00000528021 GRIN2BQ13224 1484 aa20.78■□□□□ 0.92
SDHD-204ENST00000528021 ABCA10Q8WWZ4 1543 aa20.78■□□□□ 0.92
SDHD-204ENST00000528021 GAPVD1Q14C86 1478 aa20.76■□□□□ 0.91
SDHD-204ENST00000528021 TOP2BQ02880 1626 aa20.76■□□□□ 0.91
SDHD-204ENST00000528021 RBM42Q9BTD8 480 aaKnown RBP20.75■□□□□ 0.91
SDHD-204ENST00000528021 WDR97A6NE52 1622 aa20.74■□□□□ 0.91
SDHD-204ENST00000528021 SYNJ1O43426 1573 aa20.73■□□□□ 0.91
SDHD-204ENST00000528021 SNAPC4Q5SXM2 1469 aa20.72■□□□□ 0.91
SDHD-204ENST00000528021 MYCNP04198 464 aaPredicted RBP20.71■□□□□ 0.91
SDHD-204ENST00000528021 MAGI1Q96QZ7 1491 aaPredicted RBP20.69■□□□□ 0.9
SDHD-204ENST00000528021 BIVM-ERCC5R4GMW8 1640 aa20.67■□□□□ 0.9
SDHD-204ENST00000528021 TRIM41Q8WV44 630 aa20.63■□□□□ 0.89
SDHD-204ENST00000528021 SYNJ2O15056 1496 aa20.62■□□□□ 0.89
SDHD-204ENST00000528021 KIF27Q86VH2 1401 aa20.56■□□□□ 0.88
SDHD-204ENST00000528021 POLA2Q14181 598 aa20.56■□□□□ 0.88
SDHD-204ENST00000528021 ABCA5Q8WWZ7 1642 aa20.56■□□□□ 0.88
SDHD-204ENST00000528021 FHAD1B1AJZ9 1412 aa20.55■□□□□ 0.88
SDHD-204ENST00000528021 ERICH3Q5RHP9 1530 aa20.51■□□□□ 0.87
SDHD-204ENST00000528021 IGF1RP08069 1367 aa20.49■□□□□ 0.87
SDHD-204ENST00000528021 CYB5RLQ6IPT4 315 aa20.49■□□□□ 0.87
SDHD-204ENST00000528021 CHD1O14646 1710 aa20.47■□□□□ 0.87
SDHD-204ENST00000528021 GRIN2AQ12879 1464 aa20.46■□□□□ 0.87
SDHD-204ENST00000528021 PBRM1Q86U86 1689 aa20.45■□□□□ 0.86
SDHD-204ENST00000528021 ARHGEF11O15085 1522 aa20.43■□□□□ 0.86
SDHD-204ENST00000528021 ADAMTS12P58397 1594 aa20.4■□□□□ 0.86
SDHD-204ENST00000528021 CARMIL1Q5VZK9 1371 aa20.39■□□□□ 0.85
SDHD-204ENST00000528021 CHRDL2Q6WN34 429 aa20.38■□□□□ 0.85
SDHD-204ENST00000528021 NUP160Q12769 1436 aa20.37■□□□□ 0.85
SDHD-204ENST00000528021 RIMBP3CA6NJZ7 1639 aa20.37■□□□□ 0.85
SDHD-204ENST00000528021 RIMBP3BA6NNM3 1639 aa20.37■□□□□ 0.85
SDHD-204ENST00000528021 RIMBP3Q9UFD9 1639 aa20.37■□□□□ 0.85
SDHD-204ENST00000528021 CLASP1Q7Z460 1538 aa20.37■□□□□ 0.85
SDHD-204ENST00000528021 JPH4Q96JJ6 628 aa20.36■□□□□ 0.85
SDHD-204ENST00000528021 CEP170Q5SW79 1584 aa20.27■□□□□ 0.84
SDHD-204ENST00000528021 ARAP1Q96P48 1450 aa20.27■□□□□ 0.84
SDHD-204ENST00000528021 SLC4A1APQ9BWU0 796 aaKnown RBP20.27■□□□□ 0.84
SDHD-204ENST00000528021 FOXD4L1Q9NU39 408 aa20.26■□□□□ 0.83
SDHD-204ENST00000528021 RUSC2Q8N2Y8 1516 aa20.25■□□□□ 0.83
SDHD-204ENST00000528021 PRG4Q92954 1404 aaPredicted RBP20.23■□□□□ 0.83
SDHD-204ENST00000528021 ZBTB12Q9Y330 459 aaPredicted RBP20.23■□□□□ 0.83
SDHD-204ENST00000528021 CUL7Q14999 1698 aa20.22■□□□□ 0.83
SDHD-204ENST00000528021 KIAA0586Q9BVV6 1533 aa20.22■□□□□ 0.83
SDHD-204ENST00000528021 CSRNP3Q8WYN3 585 aa20.21■□□□□ 0.83
SDHD-204ENST00000528021 RAPGEF2Q9Y4G8 1499 aa20.19■□□□□ 0.82
SDHD-204ENST00000528021 FAM9AQ8IZU1 332 aaPredicted RBP20.16■□□□□ 0.82
SDHD-204ENST00000528021 AKT1S1Q96B36 256 aa20.16■□□□□ 0.82
SDHD-204ENST00000528021 ATF5Q9Y2D1 282 aaPredicted RBP20.13■□□□□ 0.81
SDHD-204ENST00000528021 EEA1Q15075 1411 aa20.1■□□□□ 0.81
SDHD-204ENST00000528021 CARMIL2Q6F5E8 1435 aa20.1■□□□□ 0.81
SDHD-204ENST00000528021 ERCC6L2Q5T890 1561 aa20.09■□□□□ 0.81
SDHD-204ENST00000528021 TTBK1Q5TCY1 1321 aaPredicted RBP20.09■□□□□ 0.81
SDHD-204ENST00000528021 NPM1P06748 294 aaKnown RBP eCLIP20.09■□□□□ 0.81
SDHD-204ENST00000528021 SHROOM2Q13796 1616 aa20.08■□□□□ 0.8
SDHD-204ENST00000528021 PRXQ9BXM0 1461 aa20.06■□□□□ 0.8
SDHD-204ENST00000528021 PTPRGP23470 1445 aa20.03■□□□□ 0.8
SDHD-204ENST00000528021 TNIKQ9UKE5 1360 aa20.01■□□□□ 0.79
SDHD-204ENST00000528021 IQGAP2Q13576 1575 aa19.98■□□□□ 0.79
SDHD-204ENST00000528021 UBTFP17480 764 aaKnown RBP19.91■□□□□ 0.78
SDHD-204ENST00000528021 REM2Q8IYK8 340 aaPredicted RBP19.91■□□□□ 0.78
SDHD-204ENST00000528021 EHMT2Q96KQ7 1210 aa19.91■□□□□ 0.78
SDHD-204ENST00000528021 RANGAP1P46060 587 aaPredicted RBP19.9■□□□□ 0.78
SDHD-204ENST00000528021 UGGT2Q9NYU1 1516 aa19.9■□□□□ 0.78
SDHD-204ENST00000528021 GOLGA3Q08378 1498 aa19.89■□□□□ 0.77
SDHD-204ENST00000528021 DISP1Q96F81 1524 aa19.88■□□□□ 0.77
SDHD-204ENST00000528021 P3H3Q8IVL6 736 aa19.88■□□□□ 0.77
SDHD-204ENST00000528021 UACAQ9BZF9 1416 aa19.84■□□□□ 0.77
SDHD-204ENST00000528021 FAM69CQ0P6D2 419 aa19.82■□□□□ 0.76
SDHD-204ENST00000528021 SP7Q8TDD2 431 aaPredicted RBP19.81■□□□□ 0.76
SDHD-204ENST00000528021 PIP4P2Q8N4L2 257 aa19.78■□□□□ 0.76
SDHD-204ENST00000528021 KIAA0556O60303 1618 aa19.76■□□□□ 0.75
SDHD-204ENST00000528021 UHRF1BP1LA0JNW5 1464 aa19.75■□□□□ 0.75
SDHD-204ENST00000528021 ABCC2Q92887 1545 aa19.75■□□□□ 0.75
SDHD-204ENST00000528021 ATXN8OSP0DMR3 200 aa19.74■□□□□ 0.75
SDHD-204ENST00000528021 ADCY10Q96PN6 1610 aa19.73■□□□□ 0.75
SDHD-204ENST00000528021 ZBTB22O15209 634 aa19.72■□□□□ 0.75
SDHD-204ENST00000528021 KIF21BO75037 1637 aa19.72■□□□□ 0.75
SDHD-204ENST00000528021 CTTNBP2Q8WZ74 1663 aa19.71■□□□□ 0.75
SDHD-204ENST00000528021 PITPNM1O00562 1244 aa19.69■□□□□ 0.74
SDHD-204ENST00000528021 ABCC10Q5T3U5 1492 aa19.68■□□□□ 0.74
SDHD-204ENST00000528021 PLB1Q6P1J6 1458 aa19.68■□□□□ 0.74
SDHD-204ENST00000528021 MAPKBP1O60336 1514 aa19.68■□□□□ 0.74
SDHD-204ENST00000528021 ARID3CA6NKF2 412 aa19.67■□□□□ 0.74
SDHD-204ENST00000528021 ASXL2Q76L83 1435 aa19.67■□□□□ 0.74
SDHD-204ENST00000528021 KDM5BQ9UGL1 1544 aa19.64■□□□□ 0.73
SDHD-204ENST00000528021 KCNH8Q96L42 1107 aa19.63■□□□□ 0.73
SDHD-204ENST00000528021 FHOD3Q2V2M9 1422 aa19.62■□□□□ 0.73
SDHD-204ENST00000528021 FXR2P51116 673 aaKnown RBP eCLIP19.61■□□□□ 0.73
SDHD-204ENST00000528021 ATP1B4Q9UN42 357 aaPredicted RBP19.61■□□□□ 0.73
SDHD-204ENST00000528021 ABCA8O94911 1581 aa19.57■□□□□ 0.72
SDHD-204ENST00000528021 SAMD9Q5K651 1589 aa19.57■□□□□ 0.72
SDHD-204ENST00000528021 EFCAB5A4FU69 1503 aa19.56■□□□□ 0.72
SDHD-204ENST00000528021 HAX1O00165 279 aa19.55■□□□□ 0.72
SDHD-204ENST00000528021 PLEKHD1A6NEE1 506 aa19.54■□□□□ 0.72
SDHD-204ENST00000528021 SPDYE2BA6NHP3 402 aa19.53■□□□□ 0.72
SDHD-204ENST00000528021 SPDYE6P0CI01 402 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms