RNA–Protein interactions for RNA: ENST00000526060.5

SYVN1-206, Transcript of synoviolin 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYVN1, Length 3,144 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-206ENST00000526060 MAPKBP1O60336 1514 aa16.25■□□□□ 0.19
SYVN1-206ENST00000526060 BCL11AQ9H165 835 aa16.25■□□□□ 0.19
SYVN1-206ENST00000526060 PHLDB1Q86UU1 1377 aa16.23■□□□□ 0.19
SYVN1-206ENST00000526060 FAM50AQ14320 339 aaKnown RBP16.23■□□□□ 0.19
SYVN1-206ENST00000526060 SUPT16HQ9Y5B9 1047 aaKnown RBP16.21■□□□□ 0.18
SYVN1-206ENST00000526060 CC2D2AQ9P2K1 1620 aa16.2■□□□□ 0.18
SYVN1-206ENST00000526060 CFAP43Q8NDM7 1665 aa16.19■□□□□ 0.18
SYVN1-206ENST00000526060 ATP1B4Q9UN42 357 aaPredicted RBP16.19■□□□□ 0.18
SYVN1-206ENST00000526060 P3H3Q8IVL6 736 aa16.19■□□□□ 0.18
SYVN1-206ENST00000526060 PCF11O94913 1555 aaKnown RBP16.18■□□□□ 0.18
SYVN1-206ENST00000526060 FANCD2Q9BXW9 1451 aa16.16■□□□□ 0.18
SYVN1-206ENST00000526060 TIMELESSQ9UNS1 1208 aa16.16■□□□□ 0.18
SYVN1-206ENST00000526060 ANP32EQ9BTT0 268 aa16.14■□□□□ 0.18
SYVN1-206ENST00000526060 SIN3AQ96ST3 1273 aa16.14■□□□□ 0.17
SYVN1-206ENST00000526060 FYCO1Q9BQS8 1478 aa16.13■□□□□ 0.17
SYVN1-206ENST00000526060 FHOD3Q2V2M9 1422 aa16.13■□□□□ 0.17
SYVN1-206ENST00000526060 EFCAB5A4FU69 1503 aa16.13■□□□□ 0.17
SYVN1-206ENST00000526060 WDR97A6NE52 1622 aa16.12■□□□□ 0.17
SYVN1-206ENST00000526060 BCANQ96GW7 911 aa16.12■□□□□ 0.17
SYVN1-206ENST00000526060 DNMBPQ6XZF7 1577 aa16.11■□□□□ 0.17
SYVN1-206ENST00000526060 ABCA10Q8WWZ4 1543 aa16.11■□□□□ 0.17
SYVN1-206ENST00000526060 CASKIN1Q8WXD9 1431 aa16.11■□□□□ 0.17
SYVN1-206ENST00000526060 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.11■□□□□ 0.17
SYVN1-206ENST00000526060 AQRO60306 1485 aaKnown RBP eCLIP16.1■□□□□ 0.172e-7■■■■□ 19.3
SYVN1-206ENST00000526060 RAD54L2Q9Y4B4 1467 aa16.1■□□□□ 0.17
SYVN1-206ENST00000526060 DDX10Q13206 875 aaKnown RBP16.1■□□□□ 0.17
SYVN1-206ENST00000526060 TSHZ2Q9NRE2 1034 aa16.09■□□□□ 0.17
SYVN1-206ENST00000526060 KCNH8Q96L42 1107 aa16.09■□□□□ 0.17
SYVN1-206ENST00000526060 POLA1P09884 1462 aaPredicted RBP16.07■□□□□ 0.16
SYVN1-206ENST00000526060 CUL7Q14999 1698 aa16.07■□□□□ 0.16
SYVN1-206ENST00000526060 TOPBP1Q92547 1522 aa16.07■□□□□ 0.16
SYVN1-206ENST00000526060 FMN1Q68DA7 1419 aa16.06■□□□□ 0.16
SYVN1-206ENST00000526060 NESP48681 1621 aa16.05■□□□□ 0.16
SYVN1-206ENST00000526060 PPP1R15AO75807 674 aaPredicted RBP16.05■□□□□ 0.16
SYVN1-206ENST00000526060 CTTNBP2Q8WZ74 1663 aa16.04■□□□□ 0.16
SYVN1-206ENST00000526060 FGD6Q6ZV73 1430 aa16.03■□□□□ 0.16
SYVN1-206ENST00000526060 MTUS2Q5JR59 1369 aa16■□□□□ 0.15
SYVN1-206ENST00000526060 TONSLQ96HA7 1378 aa15.99■□□□□ 0.15
SYVN1-206ENST00000526060 ANP32CO43423 234 aa15.98■□□□□ 0.15
SYVN1-206ENST00000526060 CCDC18Q5T9S5 1454 aa15.98■□□□□ 0.15
SYVN1-206ENST00000526060 CCER2I3L3R5 266 aa15.97■□□□□ 0.15
SYVN1-206ENST00000526060 SNAPC4Q5SXM2 1469 aa15.97■□□□□ 0.15
SYVN1-206ENST00000526060 HIRIP3Q9BW71 556 aaPredicted RBP15.97■□□□□ 0.15
SYVN1-206ENST00000526060 HFM1A2PYH4 1435 aa15.95■□□□□ 0.14
SYVN1-206ENST00000526060 UACAQ9BZF9 1416 aa15.95■□□□□ 0.14
SYVN1-206ENST00000526060 FKBP8Q14318 412 aa15.92■□□□□ 0.14
SYVN1-206ENST00000526060 PTPN23Q9H3S7 1636 aa15.92■□□□□ 0.14
SYVN1-206ENST00000526060 SAMD9Q5K651 1589 aa15.91■□□□□ 0.14
SYVN1-206ENST00000526060 MYOM3Q5VTT5 1437 aa15.91■□□□□ 0.14
SYVN1-206ENST00000526060 TDRD9Q8NDG6 1382 aaKnown RBP15.91■□□□□ 0.14
SYVN1-206ENST00000526060 PTPRKQ15262 1439 aa15.91■□□□□ 0.14
SYVN1-206ENST00000526060 DNAJC5BQ9UF47 199 aa15.91■□□□□ 0.14
SYVN1-206ENST00000526060 NCOA2Q15596 1464 aa15.91■□□□□ 0.14
SYVN1-206ENST00000526060 NEFLP07196 543 aa15.9■□□□□ 0.14
SYVN1-206ENST00000526060 URB2Q14146 1524 aaKnown RBP15.89■□□□□ 0.13
SYVN1-206ENST00000526060 NAIPQ13075 1403 aa15.89■□□□□ 0.13
SYVN1-206ENST00000526060 THOC2Q8NI27 1593 aaKnown RBP15.89■□□□□ 0.13
SYVN1-206ENST00000526060 LAMC3Q9Y6N6 1575 aa15.88■□□□□ 0.13
SYVN1-206ENST00000526060 GRIN2BQ13224 1484 aa15.88■□□□□ 0.13
SYVN1-206ENST00000526060 GAPVD1Q14C86 1478 aa15.88■□□□□ 0.13
SYVN1-206ENST00000526060 SUPT6HQ7KZ85 1726 aaKnown RBP15.88■□□□□ 0.13
SYVN1-206ENST00000526060 ABCA5Q8WWZ7 1642 aa15.87■□□□□ 0.13
SYVN1-206ENST00000526060 EHBP1L1Q8N3D4 1523 aa15.87■□□□□ 0.13
SYVN1-206ENST00000526060 TRIM52Q96A61 297 aa15.86■□□□□ 0.13
SYVN1-206ENST00000526060 LRRIQ1Q96JM4 1722 aa15.86■□□□□ 0.13
SYVN1-206ENST00000526060 UGGT2Q9NYU1 1516 aa15.81■□□□□ 0.12
SYVN1-206ENST00000526060 PDS5BQ9NTI5 1447 aa15.81■□□□□ 0.12
SYVN1-206ENST00000526060 KIF21AQ7Z4S6 1674 aa15.8■□□□□ 0.12
SYVN1-206ENST00000526060 ARHGEF11O15085 1522 aa15.79■□□□□ 0.12
SYVN1-206ENST00000526060 RRP7BPQ9NSQ0 103 aa15.79■□□□□ 0.12
SYVN1-206ENST00000526060 CHIC2Q9UKJ5 165 aa15.77■□□□□ 0.11
SYVN1-206ENST00000526060 TCOF1Q13428 1488 aaKnown RBP15.76■□□□□ 0.11
SYVN1-206ENST00000526060 KDM5BQ9UGL1 1544 aa15.76■□□□□ 0.11
SYVN1-206ENST00000526060 MAGI3Q5TCQ9 1506 aa15.76■□□□□ 0.11
SYVN1-206ENST00000526060 HECW1Q76N89 1606 aa15.75■□□□□ 0.11
SYVN1-206ENST00000526060 AKNAQ7Z591 1439 aa15.74■□□□□ 0.11
SYVN1-206ENST00000526060 RBM19Q9Y4C8 960 aaKnown RBP15.74■□□□□ 0.11
SYVN1-206ENST00000526060 GCC2Q8IWJ2 1684 aa15.74■□□□□ 0.11
SYVN1-206ENST00000526060 HSPA5P11021 654 aaKnown RBP15.72■□□□□ 0.11
SYVN1-206ENST00000526060 EIF4G2P78344 907 aaKnown RBP eCLIP15.71■□□□□ 0.11
SYVN1-206ENST00000526060 MIA2Q96PC5 1412 aa15.71■□□□□ 0.11
SYVN1-206ENST00000526060 EPRSP07814 1512 aaKnown RBP15.71■□□□□ 0.11
SYVN1-206ENST00000526060 HNRNPUQ00839 825 aaKnown RBP eCLIP15.71■□□□□ 0.11
SYVN1-206ENST00000526060 TARBP1Q13395 1621 aaKnown RBP15.7■□□□□ 0.1
SYVN1-206ENST00000526060 WASHC2AQ641Q2 1341 aa15.7■□□□□ 0.1
SYVN1-206ENST00000526060 ARID3CA6NKF2 412 aa15.69■□□□□ 0.1
SYVN1-206ENST00000526060 IQGAP2Q13576 1575 aa15.69■□□□□ 0.1
SYVN1-206ENST00000526060 MPHOSPH9Q99550 1183 aa15.69■□□□□ 0.1
SYVN1-206ENST00000526060 DENND4BO75064 1496 aaPredicted RBP15.68■□□□□ 0.1
SYVN1-206ENST00000526060 ERICH6Q7L0X2 663 aa15.68■□□□□ 0.1
SYVN1-206ENST00000526060 PBRM1Q86U86 1689 aa15.66■□□□□ 0.1
SYVN1-206ENST00000526060 KDM6BO15054 1643 aa15.65■□□□□ 0.1
SYVN1-206ENST00000526060 CDK13Q14004 1512 aaKnown RBP15.65■□□□□ 0.1
SYVN1-206ENST00000526060 L3MBTL2Q969R5 705 aa15.64■□□□□ 0.09
SYVN1-206ENST00000526060 CNTLNQ9NXG0 1405 aa15.64■□□□□ 0.09
SYVN1-206ENST00000526060 WDR62O43379 1518 aa15.63■□□□□ 0.09
SYVN1-206ENST00000526060 ADAMTS12P58397 1594 aa15.62■□□□□ 0.09
SYVN1-206ENST00000526060 ROCK1Q13464 1354 aa15.6■□□□□ 0.09
SYVN1-206ENST00000526060 FOXD1Q16676 465 aa15.6■□□□□ 0.09
SYVN1-206ENST00000526060 DAPK1P53355 1430 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms