RNA–Protein interactions for RNA: ENST00000526060.5

SYVN1-206, Transcript of synoviolin 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYVN1, Length 3,144 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-206ENST00000526060 NISCHQ9Y2I1 1504 aa22.96■■□□□ 1.27
SYVN1-206ENST00000526060 SHROOM4Q9ULL8 1493 aa19.67■□□□□ 0.74
SYVN1-206ENST00000526060 CCDC180Q9P1Z9 1646 aa19.46■□□□□ 0.71
SYVN1-206ENST00000526060 ZCCHC6Q5VYS8 1495 aaKnown RBP19.44■□□□□ 0.7
SYVN1-206ENST00000526060 SUPT5HO00267 1087 aaKnown RBP19.39■□□□□ 0.69
SYVN1-206ENST00000526060 DCAF8L2P0C7V8 631 aa19.09■□□□□ 0.65
SYVN1-206ENST00000526060 CHIC1Q5VXU3 224 aa18.93■□□□□ 0.62
SYVN1-206ENST00000526060 DCAF1Q9Y4B6 1507 aa18.85■□□□□ 0.61
SYVN1-206ENST00000526060 MYO15BQ96JP2 1530 aa18.84■□□□□ 0.61
SYVN1-206ENST00000526060 HRCP23327 699 aa18.63■□□□□ 0.57
SYVN1-206ENST00000526060 PCGF6Q9BYE7 350 aa18.51■□□□□ 0.55
SYVN1-206ENST00000526060 ABCC9O60706 1549 aa18.38■□□□□ 0.53
SYVN1-206ENST00000526060 PPARGC1BQ86YN6 1023 aaKnown RBP18.37■□□□□ 0.53
SYVN1-206ENST00000526060 LOC105371045A0A1W2PR82 267 aa18.35■□□□□ 0.53
SYVN1-206ENST00000526060 SCRIBQ14160 1630 aa18.24■□□□□ 0.51
SYVN1-206ENST00000526060 RSF1Q96T23 1441 aaPredicted RBP18.22■□□□□ 0.51
SYVN1-206ENST00000526060 TRIM26Q12899 539 aaPredicted RBP18.16■□□□□ 0.5
SYVN1-206ENST00000526060 TRIM41Q8WV44 630 aa18.08■□□□□ 0.49
SYVN1-206ENST00000526060 RB1CC1Q8TDY2 1594 aa18.06■□□□□ 0.48
SYVN1-206ENST00000526060 NACADO15069 1562 aa17.96■□□□□ 0.47
SYVN1-206ENST00000526060 FAM9AQ8IZU1 332 aaPredicted RBP17.9■□□□□ 0.46
SYVN1-206ENST00000526060 ZEB1P37275 1124 aaPredicted RBP17.87■□□□□ 0.45
SYVN1-206ENST00000526060 CECR2Q9BXF3 1484 aa17.87■□□□□ 0.45
SYVN1-206ENST00000526060 MROH2BQ7Z745 1585 aa17.84■□□□□ 0.45
SYVN1-206ENST00000526060 PELP1Q8IZL8 1130 aaKnown RBP17.79■□□□□ 0.44
SYVN1-206ENST00000526060 WIZO95785 1651 aa17.75■□□□□ 0.43
SYVN1-206ENST00000526060 EHMT2Q96KQ7 1210 aa17.72■□□□□ 0.43
SYVN1-206ENST00000526060 BAZ1AQ9NRL2 1556 aaPredicted RBP17.67■□□□□ 0.42
SYVN1-206ENST00000526060 SCAF1Q9H7N4 1312 aaKnown RBP17.61■□□□□ 0.41
SYVN1-206ENST00000526060 EIF4G1Q04637 1599 aaKnown RBP17.56■□□□□ 0.4
SYVN1-206ENST00000526060 TOP2AP11388 1531 aaKnown RBP17.5■□□□□ 0.39
SYVN1-206ENST00000526060 SMARCA4P51532 1647 aa17.45■□□□□ 0.38
SYVN1-206ENST00000526060 CCDC88BA6NC98 1476 aa17.42■□□□□ 0.38
SYVN1-206ENST00000526060 ABCC8Q09428 1581 aa17.41■□□□□ 0.38
SYVN1-206ENST00000526060 SMARCA2P51531 1590 aa17.39■□□□□ 0.37
SYVN1-206ENST00000526060 CCER1Q8TC90 406 aaPredicted RBP17.37■□□□□ 0.37
SYVN1-206ENST00000526060 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.36■□□□□ 0.37
SYVN1-206ENST00000526060 WRNQ14191 1432 aaPredicted RBP eCLIP17.34■□□□□ 0.37
SYVN1-206ENST00000526060 UNC13AQ9UPW8 1703 aa17.33■□□□□ 0.36
SYVN1-206ENST00000526060 PABPN1Q86U42 306 aaKnown RBP eCLIP17.31■□□□□ 0.36
SYVN1-206ENST00000526060 CEP162Q5TB80 1403 aa17.3■□□□□ 0.36
SYVN1-206ENST00000526060 EEA1Q15075 1411 aa17.3■□□□□ 0.36
SYVN1-206ENST00000526060 TNIKQ9UKE5 1360 aa17.29■□□□□ 0.36
SYVN1-206ENST00000526060 SOGA1O94964 1423 aa17.28■□□□□ 0.36
SYVN1-206ENST00000526060 CSRNP3Q8WYN3 585 aa17.25■□□□□ 0.35
SYVN1-206ENST00000526060 UBTFP17480 764 aaKnown RBP17.21■□□□□ 0.35
SYVN1-206ENST00000526060 TTBK1Q5TCY1 1321 aaPredicted RBP17.21■□□□□ 0.35
SYVN1-206ENST00000526060 RUSC2Q8N2Y8 1516 aa17.17■□□□□ 0.34
SYVN1-206ENST00000526060 GOLGA3Q08378 1498 aa17.16■□□□□ 0.34
SYVN1-206ENST00000526060 NEUROD1Q13562 356 aa17.14■□□□□ 0.33
SYVN1-206ENST00000526060 BICRAQ9NZM4 1560 aa17.11■□□□□ 0.33
SYVN1-206ENST00000526060 PEG3Q9GZU2 1588 aa17.11■□□□□ 0.33
SYVN1-206ENST00000526060 DIEXFQ68CQ4 756 aaKnown RBP17.1■□□□□ 0.33
SYVN1-206ENST00000526060 GTF3C3Q9Y5Q9 886 aa17.1■□□□□ 0.33
SYVN1-206ENST00000526060 ACIN1Q9UKV3 1341 aaKnown RBP17.09■□□□□ 0.33
SYVN1-206ENST00000526060 CEP164Q9UPV0 1460 aa17.05■□□□□ 0.32
SYVN1-206ENST00000526060 MYT1Q01538 1121 aa17.04■□□□□ 0.32
SYVN1-206ENST00000526060 KIF21BO75037 1637 aa17.01■□□□□ 0.31
SYVN1-206ENST00000526060 SYNJ1O43426 1573 aa17.01■□□□□ 0.31
SYVN1-206ENST00000526060 CENPBP07199 599 aaPredicted RBP17■□□□□ 0.31
SYVN1-206ENST00000526060 CLIP1P30622 1438 aa16.97■□□□□ 0.31
SYVN1-206ENST00000526060 ATAD2BQ9ULI0 1458 aa16.97■□□□□ 0.31
SYVN1-206ENST00000526060 BAZ1BQ9UIG0 1483 aaKnown RBP16.95■□□□□ 0.3
SYVN1-206ENST00000526060 ZNF316A6NFI3 1004 aaPredicted RBP16.95■□□□□ 0.3
SYVN1-206ENST00000526060 VPS8Q8N3P4 1428 aa16.91■□□□□ 0.3
SYVN1-206ENST00000526060 APLP2Q06481 763 aa16.91■□□□□ 0.3
SYVN1-206ENST00000526060 HNRNPUL2Q1KMD3 747 aaKnown RBP16.9■□□□□ 0.3
SYVN1-206ENST00000526060 YTHDC1Q96MU7 727 aaKnown RBP16.88■□□□□ 0.29
SYVN1-206ENST00000526060 RAPGEF2Q9Y4G8 1499 aa16.86■□□□□ 0.29
SYVN1-206ENST00000526060 TOP2BQ02880 1626 aa16.81■□□□□ 0.28
SYVN1-206ENST00000526060 RANGAP1P46060 587 aaPredicted RBP16.79■□□□□ 0.28
SYVN1-206ENST00000526060 BIVM-ERCC5R4GMW8 1640 aa16.74■□□□□ 0.27
SYVN1-206ENST00000526060 ERICH3Q5RHP9 1530 aa16.72■□□□□ 0.27
SYVN1-206ENST00000526060 PRXQ9BXM0 1461 aa16.69■□□□□ 0.26
SYVN1-206ENST00000526060 MIER1Q8N108 512 aa16.68■□□□□ 0.26
SYVN1-206ENST00000526060 CLSPNQ9HAW4 1339 aa16.66■□□□□ 0.26
SYVN1-206ENST00000526060 ARAP1Q96P48 1450 aa16.64■□□□□ 0.25
SYVN1-206ENST00000526060 HMGXB3Q12766 1538 aa16.63■□□□□ 0.25
SYVN1-206ENST00000526060 NCAPD3P42695 1498 aa16.62■□□□□ 0.25
SYVN1-206ENST00000526060 KIF27Q86VH2 1401 aa16.61■□□□□ 0.25
SYVN1-206ENST00000526060 CUX1P39880 1505 aa16.6■□□□□ 0.25
SYVN1-206ENST00000526060 DHX57Q6P158 1386 aaKnown RBP16.58■□□□□ 0.25
SYVN1-206ENST00000526060 KANK4Q5T7N3 995 aaPredicted RBP16.57■□□□□ 0.24
SYVN1-206ENST00000526060 RRBP1Q9P2E9 1410 aaKnown RBP16.53■□□□□ 0.24
SYVN1-206ENST00000526060 CFTRP13569 1480 aa16.53■□□□□ 0.24
SYVN1-206ENST00000526060 ARHGAP35Q9NRY4 1499 aa16.48■□□□□ 0.23
SYVN1-206ENST00000526060 CCNB3Q8WWL7 1395 aa16.47■□□□□ 0.23
SYVN1-206ENST00000526060 CUX2O14529 1486 aa16.45■□□□□ 0.22
SYVN1-206ENST00000526060 ITGAEP38570 1179 aa16.39■□□□□ 0.21
SYVN1-206ENST00000526060 PRDM2Q13029 1718 aa16.39■□□□□ 0.21
SYVN1-206ENST00000526060 IGF1RP08069 1367 aa16.39■□□□□ 0.21
SYVN1-206ENST00000526060 MAP3K1Q13233 1512 aa16.36■□□□□ 0.21
SYVN1-206ENST00000526060 CARMIL1Q5VZK9 1371 aa16.34■□□□□ 0.21
SYVN1-206ENST00000526060 TIAM1Q13009 1591 aa16.34■□□□□ 0.21
SYVN1-206ENST00000526060 RAB3GAP2Q9H2M9 1393 aa16.32■□□□□ 0.2
SYVN1-206ENST00000526060 CADPSQ9ULU8 1353 aa16.32■□□□□ 0.2
SYVN1-206ENST00000526060 FGD5Q6ZNL6 1462 aa16.3■□□□□ 0.2
SYVN1-206ENST00000526060 LRRC9Q6ZRR7 1453 aa16.28■□□□□ 0.2
SYVN1-206ENST00000526060 FHAD1B1AJZ9 1412 aa16.28■□□□□ 0.2
SYVN1-206ENST00000526060 SETD5Q9C0A6 1442 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms