RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 FANCD2Q9BXW9 1451 aa23.63■■□□□ 1.37
BEST1-203ENST00000524877 ABCC8Q09428 1581 aa23.62■■□□□ 1.37
BEST1-203ENST00000524877 CEP162Q5TB80 1403 aa23.6■■□□□ 1.37
BEST1-203ENST00000524877 ACIN1Q9UKV3 1341 aaKnown RBP23.58■■□□□ 1.37
BEST1-203ENST00000524877 ANP32CO43423 234 aa23.57■■□□□ 1.36
BEST1-203ENST00000524877 FHAD1B1AJZ9 1412 aa23.55■■□□□ 1.36
BEST1-203ENST00000524877 TNIKQ9UKE5 1360 aa23.55■■□□□ 1.36
BEST1-203ENST00000524877 C14orf37Q86TY3 774 aa23.55■■□□□ 1.36
BEST1-203ENST00000524877 RRP7BPQ9NSQ0 103 aa23.52■■□□□ 1.36
BEST1-203ENST00000524877 CCNB3Q8WWL7 1395 aa23.52■■□□□ 1.36
BEST1-203ENST00000524877 DAXXQ9UER7 740 aaPredicted RBP23.51■■□□□ 1.35
BEST1-203ENST00000524877 SCAF1Q9H7N4 1312 aaKnown RBP23.49■■□□□ 1.35
BEST1-203ENST00000524877 OSCARQ8IYS5 282 aa23.49■■□□□ 1.35
BEST1-203ENST00000524877 GLIPR1L2Q4G1C9 344 aa23.47■■□□□ 1.35
BEST1-203ENST00000524877 NCAPD3P42695 1498 aa23.44■■□□□ 1.34
BEST1-203ENST00000524877 KDM2AQ9Y2K7 1162 aa23.43■■□□□ 1.34
BEST1-203ENST00000524877 DIEXFQ68CQ4 756 aaKnown RBP23.41■■□□□ 1.34
BEST1-203ENST00000524877 CC2D2AQ9P2K1 1620 aa23.38■■□□□ 1.33
BEST1-203ENST00000524877 KANK1Q14678 1352 aa23.38■■□□□ 1.33
BEST1-203ENST00000524877 MLECQ14165 292 aa23.37■■□□□ 1.33
BEST1-203ENST00000524877 ZBTB47Q9UFB7 747 aaPredicted RBP23.36■■□□□ 1.33
BEST1-203ENST00000524877 SENP3Q9H4L4 574 aaPredicted RBP23.35■■□□□ 1.33
BEST1-203ENST00000524877 EIF5BO60841 1220 aaKnown RBP23.31■■□□□ 1.32
BEST1-203ENST00000524877 RAPGEF2Q9Y4G8 1499 aa23.3■■□□□ 1.32
BEST1-203ENST00000524877 CANXP27824 592 aaKnown RBP23.29■■□□□ 1.32
BEST1-203ENST00000524877 JPH4Q96JJ6 628 aa23.29■■□□□ 1.32
BEST1-203ENST00000524877 CLSPNQ9HAW4 1339 aa23.29■■□□□ 1.32
BEST1-203ENST00000524877 HDGFP51858 240 aaKnown RBP23.28■■□□□ 1.32
BEST1-203ENST00000524877 HAP1P54257 671 aaPredicted RBP23.28■■□□□ 1.32
BEST1-203ENST00000524877 FMN1Q68DA7 1419 aa23.27■■□□□ 1.32
BEST1-203ENST00000524877 CYB5RLQ6IPT4 315 aa23.26■■□□□ 1.31
BEST1-203ENST00000524877 EFCAB2Q5VUJ9 269 aa23.25■■□□□ 1.31
BEST1-203ENST00000524877 ZNF316A6NFI3 1004 aaPredicted RBP23.23■■□□□ 1.31
BEST1-203ENST00000524877 ZBTB7CA1YPR0 619 aa23.22■■□□□ 1.31
BEST1-203ENST00000524877 RGL3Q3MIN7 710 aa23.2■■□□□ 1.31
BEST1-203ENST00000524877 MRC2Q9UBG0 1479 aa23.18■■□□□ 1.3
BEST1-203ENST00000524877 GTF3C3Q9Y5Q9 886 aa23.17■■□□□ 1.3
BEST1-203ENST00000524877 GAPVD1Q14C86 1478 aa23.16■■□□□ 1.3
BEST1-203ENST00000524877 FGD5Q6ZNL6 1462 aa23.15■■□□□ 1.3
BEST1-203ENST00000524877 PLEKHG5O94827 1062 aa23.14■■□□□ 1.3
BEST1-203ENST00000524877 A0A0G2JS52 829 aa23.14■■□□□ 1.29
BEST1-203ENST00000524877 GGT6Q6P531 493 aa23.13■■□□□ 1.29
BEST1-203ENST00000524877 PTPRGP23470 1445 aa23.13■■□□□ 1.29
BEST1-203ENST00000524877 ARHGAP35Q9NRY4 1499 aa23.12■■□□□ 1.29
BEST1-203ENST00000524877 HMGXB3Q12766 1538 aa23.09■■□□□ 1.29
BEST1-203ENST00000524877 POGKQ9P215 609 aa23.09■■□□□ 1.29
BEST1-203ENST00000524877 TMC1Q8TDI8 760 aa23.06■■□□□ 1.28
BEST1-203ENST00000524877 RAD54L2Q9Y4B4 1467 aa23.05■■□□□ 1.28
BEST1-203ENST00000524877 CDCA8Q53HL2 280 aa23.04■■□□□ 1.28
BEST1-203ENST00000524877 FHOD3Q2V2M9 1422 aa23.01■■□□□ 1.27
BEST1-203ENST00000524877 IFT140Q96RY7 1462 aa23.01■■□□□ 1.27
BEST1-203ENST00000524877 AQRO60306 1485 aaKnown RBP eCLIP23■■□□□ 1.27
BEST1-203ENST00000524877 CCDC18Q5T9S5 1454 aa23■■□□□ 1.27
BEST1-203ENST00000524877 NESP48681 1621 aa23■■□□□ 1.27
BEST1-203ENST00000524877 WDR43Q15061 677 aaKnown RBP eCLIP22.98■■□□□ 1.27
BEST1-203ENST00000524877 VPS8Q8N3P4 1428 aa22.98■■□□□ 1.27
BEST1-203ENST00000524877 EIF4G2P78344 907 aaKnown RBP eCLIP22.98■■□□□ 1.27
BEST1-203ENST00000524877 AEBP2Q6ZN18 517 aaPredicted RBP22.97■■□□□ 1.27
BEST1-203ENST00000524877 NPM2Q86SE8 214 aaKnown RBP22.97■■□□□ 1.27
BEST1-203ENST00000524877 GRIN2BQ13224 1484 aa22.97■■□□□ 1.27
BEST1-203ENST00000524877 LMOD2Q6P5Q4 547 aa22.97■■□□□ 1.27
BEST1-203ENST00000524877 SPAG9O60271 1321 aaKnown RBP22.95■■□□□ 1.26
BEST1-203ENST00000524877 CFTRP13569 1480 aa22.95■■□□□ 1.26
BEST1-203ENST00000524877 RSPH4AQ5TD94 716 aa22.94■■□□□ 1.26
BEST1-203ENST00000524877 BCL11AQ9H165 835 aa22.94■■□□□ 1.26
BEST1-203ENST00000524877 ANKRD30AQ9BXX3 1397 aa22.93■■□□□ 1.26
BEST1-203ENST00000524877 FAM69CQ0P6D2 419 aa22.91■■□□□ 1.26
BEST1-203ENST00000524877 CARD11Q9BXL7 1154 aa22.9■■□□□ 1.26
BEST1-203ENST00000524877 HNRNPMP52272 730 aaKnown RBP eCLIP22.87■■□□□ 1.25
BEST1-203ENST00000524877 KIF3BO15066 747 aa22.87■■□□□ 1.25
BEST1-203ENST00000524877 DNAJC5BQ9UF47 199 aa22.87■■□□□ 1.25
BEST1-203ENST00000524877 BICRAQ9NZM4 1560 aa22.86■■□□□ 1.25
BEST1-203ENST00000524877 DDX10Q13206 875 aaKnown RBP22.86■■□□□ 1.25
BEST1-203ENST00000524877 EID1Q9Y6B2 187 aa22.86■■□□□ 1.25
BEST1-203ENST00000524877 CFAP53Q96M91 514 aa22.83■■□□□ 1.24
BEST1-203ENST00000524877 WASHC2CQ9Y4E1 1318 aa22.82■■□□□ 1.24
BEST1-203ENST00000524877 LAMC3Q9Y6N6 1575 aa22.8■■□□□ 1.24
BEST1-203ENST00000524877 IGF1RP08069 1367 aa22.8■■□□□ 1.24
BEST1-203ENST00000524877 KNSTRNQ9Y448 316 aa22.79■■□□□ 1.24
BEST1-203ENST00000524877 FAM9BQ8IZU0 186 aa22.77■■□□□ 1.24
BEST1-203ENST00000524877 DCAF11Q8TEB1 546 aa22.76■■□□□ 1.23
BEST1-203ENST00000524877 TOPBP1Q92547 1522 aa22.75■■□□□ 1.23
BEST1-203ENST00000524877 PKD2Q13563 968 aa22.74■■□□□ 1.23
BEST1-203ENST00000524877 KANK4Q5T7N3 995 aaPredicted RBP22.74■■□□□ 1.23
BEST1-203ENST00000524877 PPM1GO15355 546 aaPredicted RBP22.74■■□□□ 1.23
BEST1-203ENST00000524877 NUP155O75694 1391 aa22.74■■□□□ 1.23
BEST1-203ENST00000524877 PRG4Q92954 1404 aaPredicted RBP22.71■■□□□ 1.23
BEST1-203ENST00000524877 SETD5Q9C0A6 1442 aa22.71■■□□□ 1.23
BEST1-203ENST00000524877 SRPK2P78362 688 aaKnown RBP22.7■■□□□ 1.22
BEST1-203ENST00000524877 DNMBPQ6XZF7 1577 aa22.69■■□□□ 1.22
BEST1-203ENST00000524877 SNAPC4Q5SXM2 1469 aa22.69■■□□□ 1.22
BEST1-203ENST00000524877 PRDM2Q13029 1718 aa22.68■■□□□ 1.22
BEST1-203ENST00000524877 SALL2Q9Y467 1007 aaPredicted RBP22.68■■□□□ 1.22
BEST1-203ENST00000524877 STK26Q9P289 416 aa22.68■■□□□ 1.22
BEST1-203ENST00000524877 MRS2Q9HD23 443 aa22.66■■□□□ 1.22
BEST1-203ENST00000524877 HIRIP3Q9BW71 556 aaPredicted RBP22.66■■□□□ 1.22
BEST1-203ENST00000524877 RUSC2Q8N2Y8 1516 aa22.65■■□□□ 1.22
BEST1-203ENST00000524877 TMF1P82094 1093 aa22.65■■□□□ 1.22
BEST1-203ENST00000524877 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.63■■□□□ 1.21
BEST1-203ENST00000524877 SAFB2Q14151 953 aaKnown RBP eCLIP22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms