RNA–Protein interactions for RNA: ENST00000522841.6

SMG1P3-206, Transcript of SMG1 pseudogene 3, humanhuman

TSL 2 BASIC

Gene SMG1P3, Length 2,774 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P3-206ENST00000522841 MIER1Q8N108 512 aa24.05■■□□□ 1.44
SMG1P3-206ENST00000522841 YTHDC1Q96MU7 727 aaKnown RBP24.02■■□□□ 1.44
SMG1P3-206ENST00000522841 TIAM1Q13009 1591 aa24.01■■□□□ 1.43
SMG1P3-206ENST00000522841 DNAJC5BQ9UF47 199 aa24.01■■□□□ 1.43
SMG1P3-206ENST00000522841 ABCA10Q8WWZ4 1543 aa24■■□□□ 1.43
SMG1P3-206ENST00000522841 CLSPNQ9HAW4 1339 aa23.97■■□□□ 1.43
SMG1P3-206ENST00000522841 FHOD3Q2V2M9 1422 aa23.95■■□□□ 1.43
SMG1P3-206ENST00000522841 PCF11O94913 1555 aaKnown RBP23.93■■□□□ 1.42
SMG1P3-206ENST00000522841 URB2Q14146 1524 aaKnown RBP23.93■■□□□ 1.42
SMG1P3-206ENST00000522841 LRRC9Q6ZRR7 1453 aa23.92■■□□□ 1.42
SMG1P3-206ENST00000522841 FHAD1B1AJZ9 1412 aa23.89■■□□□ 1.42
SMG1P3-206ENST00000522841 PHLDB1Q86UU1 1377 aa23.89■■□□□ 1.42
SMG1P3-206ENST00000522841 TDRD9Q8NDG6 1382 aaKnown RBP23.89■■□□□ 1.41
SMG1P3-206ENST00000522841 FAM50AQ14320 339 aaKnown RBP23.88■■□□□ 1.41
SMG1P3-206ENST00000522841 LAMC3Q9Y6N6 1575 aa23.88■■□□□ 1.41
SMG1P3-206ENST00000522841 MAP3K1Q13233 1512 aa23.87■■□□□ 1.41
SMG1P3-206ENST00000522841 CUL7Q14999 1698 aa23.85■■□□□ 1.41
SMG1P3-206ENST00000522841 RAB3GAP2Q9H2M9 1393 aa23.85■■□□□ 1.41
SMG1P3-206ENST00000522841 CFAP43Q8NDM7 1665 aa23.83■■□□□ 1.4
SMG1P3-206ENST00000522841 CTTNBP2Q8WZ74 1663 aa23.82■■□□□ 1.4
SMG1P3-206ENST00000522841 WDR97A6NE52 1622 aa23.81■■□□□ 1.4
SMG1P3-206ENST00000522841 KIF21AQ7Z4S6 1674 aa23.77■■□□□ 1.4
SMG1P3-206ENST00000522841 EFCAB5A4FU69 1503 aa23.76■■□□□ 1.39
SMG1P3-206ENST00000522841 PDS5BQ9NTI5 1447 aa23.75■■□□□ 1.39
SMG1P3-206ENST00000522841 GAPVD1Q14C86 1478 aa23.74■■□□□ 1.39
SMG1P3-206ENST00000522841 FYCO1Q9BQS8 1478 aa23.74■■□□□ 1.39
SMG1P3-206ENST00000522841 SETD5Q9C0A6 1442 aa23.73■■□□□ 1.39
SMG1P3-206ENST00000522841 CASKIN1Q8WXD9 1431 aa23.73■■□□□ 1.39
SMG1P3-206ENST00000522841 ABCA5Q8WWZ7 1642 aa23.73■■□□□ 1.39
SMG1P3-206ENST00000522841 MAPKBP1O60336 1514 aa23.69■■□□□ 1.38
SMG1P3-206ENST00000522841 SIN3AQ96ST3 1273 aa23.66■■□□□ 1.38
SMG1P3-206ENST00000522841 FMN1Q68DA7 1419 aa23.65■■□□□ 1.38
SMG1P3-206ENST00000522841 AQRO60306 1485 aaKnown RBP eCLIP23.64■■□□□ 1.38
SMG1P3-206ENST00000522841 SNAPC4Q5SXM2 1469 aa23.63■■□□□ 1.37
SMG1P3-206ENST00000522841 MTUS2Q5JR59 1369 aa23.6■■□□□ 1.37
SMG1P3-206ENST00000522841 LRRIQ1Q96JM4 1722 aa23.59■■□□□ 1.37
SMG1P3-206ENST00000522841 SAMD9Q5K651 1589 aa23.58■■□□□ 1.37
SMG1P3-206ENST00000522841 TARBP1Q13395 1621 aaKnown RBP23.58■■□□□ 1.37
SMG1P3-206ENST00000522841 FGD6Q6ZV73 1430 aa23.54■■□□□ 1.36
SMG1P3-206ENST00000522841 GRIN2BQ13224 1484 aa23.5■■□□□ 1.35
SMG1P3-206ENST00000522841 PBRM1Q86U86 1689 aa23.5■■□□□ 1.35
SMG1P3-206ENST00000522841 ARID3CA6NKF2 412 aa23.47■■□□□ 1.35
SMG1P3-206ENST00000522841 NCOA2Q15596 1464 aa23.46■■□□□ 1.35
SMG1P3-206ENST00000522841 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.46■■□□□ 1.359e-7■■□□□ 12
SMG1P3-206ENST00000522841 PTPRKQ15262 1439 aa23.45■■□□□ 1.34
SMG1P3-206ENST00000522841 MRC2Q9UBG0 1479 aa23.42■■□□□ 1.34
SMG1P3-206ENST00000522841 HIRIP3Q9BW71 556 aaPredicted RBP23.4■■□□□ 1.34
SMG1P3-206ENST00000522841 MAGI3Q5TCQ9 1506 aa23.4■■□□□ 1.34
SMG1P3-206ENST00000522841 MYOM3Q5VTT5 1437 aa23.4■■□□□ 1.34
SMG1P3-206ENST00000522841 SUPT6HQ7KZ85 1726 aaKnown RBP23.4■■□□□ 1.34
SMG1P3-206ENST00000522841 CCDC18Q5T9S5 1454 aa23.39■■□□□ 1.33
SMG1P3-206ENST00000522841 KCNH8Q96L42 1107 aa23.39■■□□□ 1.33
SMG1P3-206ENST00000522841 ADAMTS12P58397 1594 aa23.38■■□□□ 1.33
SMG1P3-206ENST00000522841 IQGAP2Q13576 1575 aa23.38■■□□□ 1.33
SMG1P3-206ENST00000522841 ZNF608Q9ULD9 1512 aaPredicted RBP23.37■■□□□ 1.33
SMG1P3-206ENST00000522841 DDX10Q13206 875 aaKnown RBP23.37■■□□□ 1.33
SMG1P3-206ENST00000522841 EHBP1L1Q8N3D4 1523 aa23.37■■□□□ 1.33
SMG1P3-206ENST00000522841 THOC2Q8NI27 1593 aaKnown RBP23.36■■□□□ 1.33
SMG1P3-206ENST00000522841 PPP1R15AO75807 674 aaPredicted RBP23.35■■□□□ 1.33
SMG1P3-206ENST00000522841 CHIC2Q9UKJ5 165 aa23.34■■□□□ 1.33
SMG1P3-206ENST00000522841 PTPN23Q9H3S7 1636 aa23.34■■□□□ 1.33
SMG1P3-206ENST00000522841 HFM1A2PYH4 1435 aa23.32■■□□□ 1.32
SMG1P3-206ENST00000522841 CDK13Q14004 1512 aaKnown RBP23.32■■□□□ 1.32
SMG1P3-206ENST00000522841 UGGT2Q9NYU1 1516 aa23.31■■□□□ 1.32
SMG1P3-206ENST00000522841 TIMELESSQ9UNS1 1208 aa23.31■■□□□ 1.32
SMG1P3-206ENST00000522841 RRP7BPQ9NSQ0 103 aa23.31■■□□□ 1.32
SMG1P3-206ENST00000522841 NAIPQ13075 1403 aa23.3■■□□□ 1.32
SMG1P3-206ENST00000522841 HECW1Q76N89 1606 aa23.3■■□□□ 1.32
SMG1P3-206ENST00000522841 EPRSP07814 1512 aaKnown RBP23.27■■□□□ 1.32
SMG1P3-206ENST00000522841 UACAQ9BZF9 1416 aa23.26■■□□□ 1.31
SMG1P3-206ENST00000522841 TONSLQ96HA7 1378 aa23.25■■□□□ 1.31
SMG1P3-206ENST00000522841 ARHGEF11O15085 1522 aa23.25■■□□□ 1.31
SMG1P3-206ENST00000522841 IFT140Q96RY7 1462 aa23.23■■□□□ 1.31
SMG1P3-206ENST00000522841 WDR62O43379 1518 aa23.22■■□□□ 1.31
SMG1P3-206ENST00000522841 TRIM52Q96A61 297 aa23.18■■□□□ 1.3
SMG1P3-206ENST00000522841 EIF4G3O43432 1585 aaKnown RBP23.15■■□□□ 1.3
SMG1P3-206ENST00000522841 TCOF1Q13428 1488 aaKnown RBP23.15■■□□□ 1.3
SMG1P3-206ENST00000522841 KDM6BO15054 1643 aa23.14■■□□□ 1.3
SMG1P3-206ENST00000522841 ERCC6Q03468 1493 aa23.14■■□□□ 1.29
SMG1P3-206ENST00000522841 DISP1Q96F81 1524 aa23.13■■□□□ 1.29
SMG1P3-206ENST00000522841 KIAA0556O60303 1618 aa23.13■■□□□ 1.29
SMG1P3-206ENST00000522841 SUPT16HQ9Y5B9 1047 aaKnown RBP23.12■■□□□ 1.29
SMG1P3-206ENST00000522841 KIAA0586Q9BVV6 1533 aa23.12■■□□□ 1.29
SMG1P3-206ENST00000522841 FBLN2P98095 1184 aa23.12■■□□□ 1.29
SMG1P3-206ENST00000522841 GRIN2AQ12879 1464 aa23.11■■□□□ 1.29
SMG1P3-206ENST00000522841 BCL11AQ9H165 835 aa23.09■■□□□ 1.29
SMG1P3-206ENST00000522841 GCC2Q8IWJ2 1684 aa23.09■■□□□ 1.29
SMG1P3-206ENST00000522841 ZNF644Q9H582 1327 aaPredicted RBP23.08■■□□□ 1.29
SMG1P3-206ENST00000522841 FOXD1Q16676 465 aa23.07■■□□□ 1.28
SMG1P3-206ENST00000522841 NUP153P49790 1475 aaKnown RBP23.06■■□□□ 1.28
SMG1P3-206ENST00000522841 CHMP7Q8WUX9 453 aaPredicted RBP23.06■■□□□ 1.28
SMG1P3-206ENST00000522841 MIA2Q96PC5 1412 aa23.06■■□□□ 1.28
SMG1P3-206ENST00000522841 DENND4BO75064 1496 aaPredicted RBP23.05■■□□□ 1.28
SMG1P3-206ENST00000522841 RAPGEF6Q8TEU7 1601 aa23.03■■□□□ 1.28
SMG1P3-206ENST00000522841 KDM5BQ9UGL1 1544 aa23.03■■□□□ 1.28
SMG1P3-206ENST00000522841 ANP32CO43423 234 aa23.03■■□□□ 1.28
SMG1P3-206ENST00000522841 MPHOSPH9Q99550 1183 aa23.02■■□□□ 1.28
SMG1P3-206ENST00000522841 CEP170Q5SW79 1584 aa22.99■■□□□ 1.27
SMG1P3-206ENST00000522841 DAPK1P53355 1430 aa22.98■■□□□ 1.27
SMG1P3-206ENST00000522841 PRG4Q92954 1404 aaPredicted RBP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms