RNA–Protein interactions for RNA: ENST00000519654.5

PTK2-215, Transcript of protein tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene PTK2, Length 4,129 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-215ENST00000519654 KIF21AQ7Z4S6 1674 aa8.66□□□□□ -1.02
PTK2-215ENST00000519654 URB2Q14146 1524 aaKnown RBP8.66□□□□□ -1.02
PTK2-215ENST00000519654 AQRO60306 1485 aaKnown RBP eCLIP8.65□□□□□ -1.022e-6■■■□□ 17.6
PTK2-215ENST00000519654 CDK11AQ9UQ88 783 aaPredicted RBP8.65□□□□□ -1.02
PTK2-215ENST00000519654 POLA1P09884 1462 aaPredicted RBP8.65□□□□□ -1.02
PTK2-215ENST00000519654 NEUROD1Q13562 356 aa8.65□□□□□ -1.02
PTK2-215ENST00000519654 KANK4Q5T7N3 995 aaPredicted RBP8.65□□□□□ -1.02
PTK2-215ENST00000519654 IGF1RP08069 1367 aa8.64□□□□□ -1.03
PTK2-215ENST00000519654 TRIM52Q96A61 297 aa8.64□□□□□ -1.03
PTK2-215ENST00000519654 CHIC2Q9UKJ5 165 aa8.64□□□□□ -1.03
PTK2-215ENST00000519654 MAGI1Q96QZ7 1491 aaPredicted RBP8.63□□□□□ -1.03
PTK2-215ENST00000519654 CUX1P39880 1505 aa8.62□□□□□ -1.03
PTK2-215ENST00000519654 FHAD1B1AJZ9 1412 aa8.62□□□□□ -1.03
PTK2-215ENST00000519654 JPH4Q96JJ6 628 aa8.61□□□□□ -1.03
PTK2-215ENST00000519654 THOC2Q8NI27 1593 aaKnown RBP8.61□□□□□ -1.03
PTK2-215ENST00000519654 MTUS2Q5JR59 1369 aa8.6□□□□□ -1.03
PTK2-215ENST00000519654 KCNH8Q96L42 1107 aa8.59□□□□□ -1.03
PTK2-215ENST00000519654 SYNJ2O15056 1496 aa8.59□□□□□ -1.03
PTK2-215ENST00000519654 SNAPC4Q5SXM2 1469 aa8.59□□□□□ -1.03
PTK2-215ENST00000519654 CENPBP07199 599 aaPredicted RBP8.58□□□□□ -1.04
PTK2-215ENST00000519654 WDR97A6NE52 1622 aa8.58□□□□□ -1.04
PTK2-215ENST00000519654 PRDM2Q13029 1718 aa8.58□□□□□ -1.04
PTK2-215ENST00000519654 FHOD3Q2V2M9 1422 aa8.56□□□□□ -1.04
PTK2-215ENST00000519654 ABCA10Q8WWZ4 1543 aa8.56□□□□□ -1.04
PTK2-215ENST00000519654 VPS8Q8N3P4 1428 aa8.56□□□□□ -1.04
PTK2-215ENST00000519654 CNGB1Q14028 1251 aaPredicted RBP8.55□□□□□ -1.04
PTK2-215ENST00000519654 YTHDC1Q96MU7 727 aaKnown RBP8.55□□□□□ -1.04
PTK2-215ENST00000519654 ZNF608Q9ULD9 1512 aaPredicted RBP8.54□□□□□ -1.04
PTK2-215ENST00000519654 RRP7BPQ9NSQ0 103 aa8.54□□□□□ -1.04
PTK2-215ENST00000519654 TOP2BQ02880 1626 aa8.54□□□□□ -1.04
PTK2-215ENST00000519654 POLR3GLQ9BT43 218 aa8.53□□□□□ -1.04
PTK2-215ENST00000519654 PTPRGP23470 1445 aa8.52□□□□□ -1.05
PTK2-215ENST00000519654 PLEKHD1A6NEE1 506 aa8.52□□□□□ -1.05
PTK2-215ENST00000519654 ERICH6Q7L0X2 663 aa8.52□□□□□ -1.05
PTK2-215ENST00000519654 ZNF326Q5BKZ1 582 aaKnown RBP8.51□□□□□ -1.05
PTK2-215ENST00000519654 ESF1Q9H501 851 aaKnown RBP8.51□□□□□ -1.05
PTK2-215ENST00000519654 ERICH3Q5RHP9 1530 aa8.5□□□□□ -1.05
PTK2-215ENST00000519654 EIF4G3O43432 1585 aaKnown RBP8.48□□□□□ -1.05
PTK2-215ENST00000519654 PRG4Q92954 1404 aaPredicted RBP8.48□□□□□ -1.05
PTK2-215ENST00000519654 GRIN2AQ12879 1464 aa8.48□□□□□ -1.05
PTK2-215ENST00000519654 PRXQ9BXM0 1461 aa8.48□□□□□ -1.05
PTK2-215ENST00000519654 CFDP1Q9UEE9 299 aaPredicted RBP8.47□□□□□ -1.05
PTK2-215ENST00000519654 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.47□□□□□ -1.053e-7■■■■□ 25.2
PTK2-215ENST00000519654 FAM69CQ0P6D2 419 aa8.46□□□□□ -1.06
PTK2-215ENST00000519654 DIEXFQ68CQ4 756 aaKnown RBP8.46□□□□□ -1.06
PTK2-215ENST00000519654 ARAP1Q96P48 1450 aa8.45□□□□□ -1.06
PTK2-215ENST00000519654 KIAA0586Q9BVV6 1533 aa8.45□□□□□ -1.06
PTK2-215ENST00000519654 CCNB3Q8WWL7 1395 aa8.45□□□□□ -1.06
PTK2-215ENST00000519654 HIRIP3Q9BW71 556 aaPredicted RBP8.44□□□□□ -1.06
PTK2-215ENST00000519654 KIF21BO75037 1637 aa8.43□□□□□ -1.06
PTK2-215ENST00000519654 TSPY4P0CV99 314 aa8.43□□□□□ -1.06
PTK2-215ENST00000519654 TSPY10P0CW01 314 aa8.43□□□□□ -1.06
PTK2-215ENST00000519654 SIN3AQ96ST3 1273 aa8.42□□□□□ -1.06
PTK2-215ENST00000519654 ARHGAP35Q9NRY4 1499 aa8.42□□□□□ -1.06
PTK2-215ENST00000519654 CUL7Q14999 1698 aa8.42□□□□□ -1.06
PTK2-215ENST00000519654 FMN1Q68DA7 1419 aa8.42□□□□□ -1.06
PTK2-215ENST00000519654 BIVM-ERCC5R4GMW8 1640 aa8.42□□□□□ -1.06
PTK2-215ENST00000519654 ARID4BQ4LE39 1312 aaPredicted RBP8.4□□□□□ -1.07
PTK2-215ENST00000519654 ZNF316A6NFI3 1004 aaPredicted RBP8.39□□□□□ -1.07
PTK2-215ENST00000519654 SENP3Q9H4L4 574 aaPredicted RBP8.39□□□□□ -1.07
PTK2-215ENST00000519654 TARBP1Q13395 1621 aaKnown RBP8.39□□□□□ -1.07
PTK2-215ENST00000519654 ARHGEF11O15085 1522 aa8.39□□□□□ -1.07
PTK2-215ENST00000519654 PLPPR3Q6T4P5 718 aa8.39□□□□□ -1.07
PTK2-215ENST00000519654 FOXD1Q16676 465 aa8.38□□□□□ -1.07
PTK2-215ENST00000519654 SLC4A1APQ9BWU0 796 aaKnown RBP8.38□□□□□ -1.07
PTK2-215ENST00000519654 ZNF644Q9H582 1327 aaPredicted RBP8.36□□□□□ -1.07
PTK2-215ENST00000519654 NUP160Q12769 1436 aa8.36□□□□□ -1.07
PTK2-215ENST00000519654 KDM2AQ9Y2K7 1162 aa8.36□□□□□ -1.07
PTK2-215ENST00000519654 ADAMTS12P58397 1594 aa8.36□□□□□ -1.07
PTK2-215ENST00000519654 TONSLQ96HA7 1378 aa8.35□□□□□ -1.07
PTK2-215ENST00000519654 HNRNPMP52272 730 aaKnown RBP eCLIP8.35□□□□□ -1.077e-7■■■■■ 28.9
PTK2-215ENST00000519654 PHLDB1Q86UU1 1377 aa8.35□□□□□ -1.07
PTK2-215ENST00000519654 UACAQ9BZF9 1416 aa8.34□□□□□ -1.07
PTK2-215ENST00000519654 CHGAP10645 457 aaKnown RBP8.34□□□□□ -1.07
PTK2-215ENST00000519654 EFCAB2Q5VUJ9 269 aa8.34□□□□□ -1.07
PTK2-215ENST00000519654 PLB1Q6P1J6 1458 aa8.34□□□□□ -1.07
PTK2-215ENST00000519654 PBRM1Q86U86 1689 aa8.33□□□□□ -1.08
PTK2-215ENST00000519654 PHF23Q9BUL5 403 aaPredicted RBP8.33□□□□□ -1.08
PTK2-215ENST00000519654 RAB3GAP2Q9H2M9 1393 aa8.33□□□□□ -1.08
PTK2-215ENST00000519654 IQGAP2Q13576 1575 aa8.33□□□□□ -1.08
PTK2-215ENST00000519654 RGL3Q3MIN7 710 aa8.33□□□□□ -1.08
PTK2-215ENST00000519654 ABCA5Q8WWZ7 1642 aa8.32□□□□□ -1.08
PTK2-215ENST00000519654 CHD1O14646 1710 aa8.31□□□□□ -1.08
PTK2-215ENST00000519654 DDX10Q13206 875 aaKnown RBP8.31□□□□□ -1.08
PTK2-215ENST00000519654 TEX14Q8IWB6 1497 aa8.3□□□□□ -1.08
PTK2-215ENST00000519654 SETD5Q9C0A6 1442 aa8.29□□□□□ -1.08
PTK2-215ENST00000519654 LRRC9Q6ZRR7 1453 aa8.29□□□□□ -1.08
PTK2-215ENST00000519654 CASKIN1Q8WXD9 1431 aa8.28□□□□□ -1.08
PTK2-215ENST00000519654 CEP170Q5SW79 1584 aa8.27□□□□□ -1.08
PTK2-215ENST00000519654 NEFLP07196 543 aa8.27□□□□□ -1.09
PTK2-215ENST00000519654 RIMBP3CA6NJZ7 1639 aa8.27□□□□□ -1.09
PTK2-215ENST00000519654 RIMBP3BA6NNM3 1639 aa8.27□□□□□ -1.09
PTK2-215ENST00000519654 RIMBP3Q9UFD9 1639 aa8.27□□□□□ -1.09
PTK2-215ENST00000519654 CCDC18Q5T9S5 1454 aa8.25□□□□□ -1.09
PTK2-215ENST00000519654 CDK13Q14004 1512 aaKnown RBP8.25□□□□□ -1.09
PTK2-215ENST00000519654 PKD2Q13563 968 aa8.24□□□□□ -1.09
PTK2-215ENST00000519654 MPHOSPH9Q99550 1183 aa8.24□□□□□ -1.09
PTK2-215ENST00000519654 SCAF1Q9H7N4 1312 aaKnown RBP8.24□□□□□ -1.09
PTK2-215ENST00000519654 MIER1Q8N108 512 aa8.24□□□□□ -1.09
PTK2-215ENST00000519654 EFCAB5A4FU69 1503 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms