RNA–Protein interactions for RNA: ENST00000519654.5

PTK2-215, Transcript of protein tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene PTK2, Length 4,129 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-215ENST00000519654 NISCHQ9Y2I1 1504 aa11.91□□□□□ -0.5
PTK2-215ENST00000519654 DCAF8L2P0C7V8 631 aa11.06□□□□□ -0.64
PTK2-215ENST00000519654 SHROOM4Q9ULL8 1493 aa10.64□□□□□ -0.71
PTK2-215ENST00000519654 ABCC9O60706 1549 aa10.53□□□□□ -0.72
PTK2-215ENST00000519654 CCDC180Q9P1Z9 1646 aa10.5□□□□□ -0.73
PTK2-215ENST00000519654 SUPT5HO00267 1087 aaKnown RBP10.43□□□□□ -0.74
PTK2-215ENST00000519654 RB1CC1Q8TDY2 1594 aa10.13□□□□□ -0.79
PTK2-215ENST00000519654 NACADO15069 1562 aa10.06□□□□□ -0.8
PTK2-215ENST00000519654 PABPN1Q86U42 306 aaKnown RBP eCLIP9.96□□□□□ -0.82
PTK2-215ENST00000519654 EHMT2Q96KQ7 1210 aa9.9□□□□□ -0.82
PTK2-215ENST00000519654 ZCCHC6Q5VYS8 1495 aaKnown RBP9.88□□□□□ -0.83
PTK2-215ENST00000519654 MYO15BQ96JP2 1530 aa9.86□□□□□ -0.83
PTK2-215ENST00000519654 DCAF1Q9Y4B6 1507 aa9.81□□□□□ -0.84
PTK2-215ENST00000519654 FAM9AQ8IZU1 332 aaPredicted RBP9.77□□□□□ -0.85
PTK2-215ENST00000519654 SCRIBQ14160 1630 aa9.72□□□□□ -0.85
PTK2-215ENST00000519654 TRIM41Q8WV44 630 aa9.63□□□□□ -0.87
PTK2-215ENST00000519654 CHIC1Q5VXU3 224 aa9.59□□□□□ -0.87
PTK2-215ENST00000519654 RANGAP1P46060 587 aaPredicted RBP9.51□□□□□ -0.89
PTK2-215ENST00000519654 LOC105371045A0A1W2PR82 267 aa9.51□□□□□ -0.89
PTK2-215ENST00000519654 CECR2Q9BXF3 1484 aa9.49□□□□□ -0.89
PTK2-215ENST00000519654 PELP1Q8IZL8 1130 aaKnown RBP9.47□□□□□ -0.89
PTK2-215ENST00000519654 TTBK1Q5TCY1 1321 aaPredicted RBP9.46□□□□□ -0.89
PTK2-215ENST00000519654 MYT1Q01538 1121 aa9.42□□□□□ -0.9
PTK2-215ENST00000519654 RSF1Q96T23 1441 aaPredicted RBP9.4□□□□□ -0.9
PTK2-215ENST00000519654 UBTFP17480 764 aaKnown RBP9.37□□□□□ -0.91
PTK2-215ENST00000519654 SMARCA2P51531 1590 aa9.37□□□□□ -0.91
PTK2-215ENST00000519654 EIF4G1Q04637 1599 aaKnown RBP9.37□□□□□ -0.91
PTK2-215ENST00000519654 BAZ1AQ9NRL2 1556 aaPredicted RBP9.37□□□□□ -0.91
PTK2-215ENST00000519654 ERCC6Q03468 1493 aa9.37□□□□□ -0.91
PTK2-215ENST00000519654 PPARGC1BQ86YN6 1023 aaKnown RBP9.37□□□□□ -0.91
PTK2-215ENST00000519654 DNAJC5BQ9UF47 199 aa9.37□□□□□ -0.91
PTK2-215ENST00000519654 BAZ1BQ9UIG0 1483 aaKnown RBP9.36□□□□□ -0.91
PTK2-215ENST00000519654 BICRAQ9NZM4 1560 aa9.35□□□□□ -0.91
PTK2-215ENST00000519654 PCGF6Q9BYE7 350 aa9.34□□□□□ -0.91
PTK2-215ENST00000519654 CC2D2AQ9P2K1 1620 aa9.31□□□□□ -0.92
PTK2-215ENST00000519654 MROH2BQ7Z745 1585 aa9.28□□□□□ -0.92
PTK2-215ENST00000519654 UNC13AQ9UPW8 1703 aa9.27□□□□□ -0.93
PTK2-215ENST00000519654 PDS5BQ9NTI5 1447 aa9.26□□□□□ -0.93
PTK2-215ENST00000519654 NCAPD3P42695 1498 aa9.24□□□□□ -0.93
PTK2-215ENST00000519654 ATP1B4Q9UN42 357 aaPredicted RBP9.23□□□□□ -0.93
PTK2-215ENST00000519654 ATAD2BQ9ULI0 1458 aa9.23□□□□□ -0.93
PTK2-215ENST00000519654 APLP2Q06481 763 aa9.22□□□□□ -0.93
PTK2-215ENST00000519654 SMARCA4P51532 1647 aa9.18□□□□□ -0.94
PTK2-215ENST00000519654 WIZO95785 1651 aa9.15□□□□□ -0.94
PTK2-215ENST00000519654 HMGXB3Q12766 1538 aa9.15□□□□□ -0.95
PTK2-215ENST00000519654 CADPSQ9ULU8 1353 aa9.13□□□□□ -0.95
PTK2-215ENST00000519654 CSRNP3Q8WYN3 585 aa9.1□□□□□ -0.95
PTK2-215ENST00000519654 CCDC88BA6NC98 1476 aa9.08□□□□□ -0.96
PTK2-215ENST00000519654 FBLN2P98095 1184 aa9.07□□□□□ -0.96
PTK2-215ENST00000519654 AEBP2Q6ZN18 517 aaPredicted RBP9.06□□□□□ -0.96
PTK2-215ENST00000519654 CEP164Q9UPV0 1460 aa9.05□□□□□ -0.96
PTK2-215ENST00000519654 P3H3Q8IVL6 736 aa9.03□□□□□ -0.96
PTK2-215ENST00000519654 ABCC8Q09428 1581 aa9.02□□□□□ -0.97
PTK2-215ENST00000519654 TOP2AP11388 1531 aaKnown RBP9.02□□□□□ -0.97
PTK2-215ENST00000519654 LAMC3Q9Y6N6 1575 aa9.02□□□□□ -0.97
PTK2-215ENST00000519654 TRIM26Q12899 539 aaPredicted RBP9.01□□□□□ -0.97
PTK2-215ENST00000519654 ITGAEP38570 1179 aa9.01□□□□□ -0.97
PTK2-215ENST00000519654 CUX2O14529 1486 aa9□□□□□ -0.97
PTK2-215ENST00000519654 WRNQ14191 1432 aaPredicted RBP eCLIP9□□□□□ -0.97
PTK2-215ENST00000519654 CHMP7Q8WUX9 453 aaPredicted RBP8.98□□□□□ -0.97
PTK2-215ENST00000519654 FANCD2Q9BXW9 1451 aa8.98□□□□□ -0.97
PTK2-215ENST00000519654 HNRNPUL2Q1KMD3 747 aaKnown RBP8.98□□□□□ -0.97
PTK2-215ENST00000519654 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.97□□□□□ -0.97
PTK2-215ENST00000519654 CCER1Q8TC90 406 aaPredicted RBP8.97□□□□□ -0.97
PTK2-215ENST00000519654 PEG3Q9GZU2 1588 aa8.97□□□□□ -0.97
PTK2-215ENST00000519654 MRC2Q9UBG0 1479 aa8.97□□□□□ -0.97
PTK2-215ENST00000519654 SOGA1O94964 1423 aa8.96□□□□□ -0.97
PTK2-215ENST00000519654 ARID3CA6NKF2 412 aa8.96□□□□□ -0.98
PTK2-215ENST00000519654 OSCARQ8IYS5 282 aa8.95□□□□□ -0.98
PTK2-215ENST00000519654 NPM1P06748 294 aaKnown RBP eCLIP8.92□□□□□ -0.98
PTK2-215ENST00000519654 NESP48681 1621 aa8.91□□□□□ -0.98
PTK2-215ENST00000519654 CFTRP13569 1480 aa8.9□□□□□ -0.98
PTK2-215ENST00000519654 RUSC2Q8N2Y8 1516 aa8.86□□□□□ -0.99
PTK2-215ENST00000519654 IFT140Q96RY7 1462 aa8.84□□□□□ -0.99
PTK2-215ENST00000519654 FAM50AQ14320 339 aaKnown RBP8.82□□□□□ -1
PTK2-215ENST00000519654 HRCP23327 699 aa8.82□□□□□ -1
PTK2-215ENST00000519654 TDRD9Q8NDG6 1382 aaKnown RBP8.81□□□□□ -1
PTK2-215ENST00000519654 CEP162Q5TB80 1403 aa8.8□□□□□ -1
PTK2-215ENST00000519654 KIF27Q86VH2 1401 aa8.8□□□□□ -1
PTK2-215ENST00000519654 CLIP1P30622 1438 aa8.79□□□□□ -1
PTK2-215ENST00000519654 TRHP20396 242 aaPredicted RBP8.78□□□□□ -1
PTK2-215ENST00000519654 DNAJC5Q9H3Z4 198 aa8.78□□□□□ -1
PTK2-215ENST00000519654 GOLGA3Q08378 1498 aa8.76□□□□□ -1.01
PTK2-215ENST00000519654 EEA1Q15075 1411 aa8.76□□□□□ -1.01
PTK2-215ENST00000519654 TNIKQ9UKE5 1360 aa8.74□□□□□ -1.01
PTK2-215ENST00000519654 CARMIL1Q5VZK9 1371 aa8.74□□□□□ -1.01
PTK2-215ENST00000519654 TOPBP1Q92547 1522 aa8.73□□□□□ -1.01
PTK2-215ENST00000519654 DNMBPQ6XZF7 1577 aa8.73□□□□□ -1.01
PTK2-215ENST00000519654 ZEB1P37275 1124 aaPredicted RBP8.73□□□□□ -1.01
PTK2-215ENST00000519654 MYT1LQ9UL68 1186 aa8.71□□□□□ -1.02
PTK2-215ENST00000519654 GRIN2BQ13224 1484 aa8.71□□□□□ -1.02
PTK2-215ENST00000519654 WDR62O43379 1518 aa8.71□□□□□ -1.02
PTK2-215ENST00000519654 RAD54L2Q9Y4B4 1467 aa8.7□□□□□ -1.02
PTK2-215ENST00000519654 RAPGEF2Q9Y4G8 1499 aa8.7□□□□□ -1.02
PTK2-215ENST00000519654 CYB5RLQ6IPT4 315 aa8.69□□□□□ -1.02
PTK2-215ENST00000519654 FGD5Q6ZNL6 1462 aa8.69□□□□□ -1.02
PTK2-215ENST00000519654 ZNF777Q9ULD5 760 aaPredicted RBP8.69□□□□□ -1.02
PTK2-215ENST00000519654 GAPVD1Q14C86 1478 aa8.68□□□□□ -1.02
PTK2-215ENST00000519654 SYNJ1O43426 1573 aa8.68□□□□□ -1.02
PTK2-215ENST00000519654 CARMIL2Q6F5E8 1435 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms