RNA–Protein interactions for RNA: ENST00000519632.5

SHPRH-207, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 5,245 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-207ENST00000519632 PRKCSHP14314 528 aaPredicted RBP16.13■□□□□ 0.17
SHPRH-207ENST00000519632 CCER2I3L3R5 266 aa16.12■□□□□ 0.17
SHPRH-207ENST00000519632 EIF4G2P78344 907 aaKnown RBP eCLIP16.12■□□□□ 0.17
SHPRH-207ENST00000519632 L1TD1Q5T7N2 865 aaKnown RBP16.11■□□□□ 0.17
SHPRH-207ENST00000519632 CLIP1P30622 1438 aa16.08■□□□□ 0.17
SHPRH-207ENST00000519632 P3H3Q8IVL6 736 aa16.07■□□□□ 0.16
SHPRH-207ENST00000519632 GOLGA6L22H0YM25 854 aa16.07■□□□□ 0.16
SHPRH-207ENST00000519632 IPO9Q96P70 1041 aaKnown RBP16.06■□□□□ 0.16
SHPRH-207ENST00000519632 SCRIBQ14160 1630 aa16.05■□□□□ 0.16
SHPRH-207ENST00000519632 FANCIQ9NVI1 1328 aa16.04■□□□□ 0.16
SHPRH-207ENST00000519632 CDK11BP21127 795 aaKnown RBP16.03■□□□□ 0.16
SHPRH-207ENST00000519632 FBLN2P98095 1184 aa16.03■□□□□ 0.16
SHPRH-207ENST00000519632 RSPH6AQ9H0K4 717 aa16.03■□□□□ 0.16
SHPRH-207ENST00000519632 PNNQ9H307 717 aaKnown RBP16.02■□□□□ 0.16
SHPRH-207ENST00000519632 WDR43Q15061 677 aaKnown RBP eCLIP16.01■□□□□ 0.15
SHPRH-207ENST00000519632 DNTTIP2Q5QJE6 756 aaKnown RBP16.01■□□□□ 0.15
SHPRH-207ENST00000519632 NCLP19338 710 aaKnown RBP16■□□□□ 0.15
SHPRH-207ENST00000519632 PTMAP06454 111 aaKnown RBP15.99■□□□□ 0.15
SHPRH-207ENST00000519632 TNIKQ9UKE5 1360 aa15.97■□□□□ 0.15
SHPRH-207ENST00000519632 USP35Q9P2H5 1018 aa15.97■□□□□ 0.15
SHPRH-207ENST00000519632 VSIG10Q8N0Z9 540 aa15.96■□□□□ 0.15
SHPRH-207ENST00000519632 ARID4BQ4LE39 1312 aaPredicted RBP15.96■□□□□ 0.15
SHPRH-207ENST00000519632 GOLGA3Q08378 1498 aa15.96■□□□□ 0.15
SHPRH-207ENST00000519632 SENP3-EIF4A1A0A087X0R7 540 aa15.96■□□□□ 0.14
SHPRH-207ENST00000519632 HSP90AA2PQ14568 343 aaPredicted RBP15.94■□□□□ 0.14
SHPRH-207ENST00000519632 RGS3P49796 1198 aa15.93■□□□□ 0.14
SHPRH-207ENST00000519632 EEA1Q15075 1411 aa15.93■□□□□ 0.14
SHPRH-207ENST00000519632 ANO8Q9HCE9 1232 aaPredicted RBP15.92■□□□□ 0.14
SHPRH-207ENST00000519632 MSNP26038 577 aaKnown RBP15.91■□□□□ 0.14
SHPRH-207ENST00000519632 SIN3AQ96ST3 1273 aa15.91■□□□□ 0.14
SHPRH-207ENST00000519632 TCERG1O14776 1098 aaKnown RBP15.91■□□□□ 0.14
SHPRH-207ENST00000519632 CHIC2Q9UKJ5 165 aa15.88■□□□□ 0.13
SHPRH-207ENST00000519632 ARID3CA6NKF2 412 aa15.86■□□□□ 0.13
SHPRH-207ENST00000519632 TIMELESSQ9UNS1 1208 aa15.85■□□□□ 0.13
SHPRH-207ENST00000519632 GSE1Q14687 1217 aa15.85■□□□□ 0.13
SHPRH-207ENST00000519632 ZNF777Q9ULD5 760 aaPredicted RBP15.84■□□□□ 0.13
SHPRH-207ENST00000519632 GOLGA6L3A6NEY3 463 aa15.81■□□□□ 0.12
SHPRH-207ENST00000519632 AMER1Q5JTC6 1135 aaPredicted RBP15.8■□□□□ 0.12
SHPRH-207ENST00000519632 PKNOX2Q96KN3 472 aa15.8■□□□□ 0.12
SHPRH-207ENST00000519632 KCNH8Q96L42 1107 aa15.79■□□□□ 0.12
SHPRH-207ENST00000519632 HSP90AB1P08238 724 aaKnown RBP15.78■□□□□ 0.12
SHPRH-207ENST00000519632 MYH16Q9H6N6 1097 aa15.78■□□□□ 0.12
SHPRH-207ENST00000519632 RSF1Q96T23 1441 aaPredicted RBP15.77■□□□□ 0.12
SHPRH-207ENST00000519632 KDM2AQ9Y2K7 1162 aa15.77■□□□□ 0.11
SHPRH-207ENST00000519632 GZF1Q9H116 711 aaPredicted RBP15.76■□□□□ 0.11
SHPRH-207ENST00000519632 HSCBQ8IWL3 235 aa15.76■□□□□ 0.11
SHPRH-207ENST00000519632 ARID3AQ99856 593 aa15.75■□□□□ 0.11
SHPRH-207ENST00000519632 SLC24A1O60721 1099 aa15.75■□□□□ 0.11
SHPRH-207ENST00000519632 CHAF1AQ13111 956 aaPredicted RBP15.75■□□□□ 0.11
SHPRH-207ENST00000519632 MTUS2Q5JR59 1369 aa15.74■□□□□ 0.11
SHPRH-207ENST00000519632 SLKQ9H2G2 1235 aaPredicted RBP15.73■□□□□ 0.11
SHPRH-207ENST00000519632 SPRYD3Q8NCJ5 442 aa15.72■□□□□ 0.11
SHPRH-207ENST00000519632 RRP7BPQ9NSQ0 103 aa15.72■□□□□ 0.11
SHPRH-207ENST00000519632 CEP164Q9UPV0 1460 aa15.72■□□□□ 0.11
SHPRH-207ENST00000519632 CCNB3Q8WWL7 1395 aa15.72■□□□□ 0.11
SHPRH-207ENST00000519632 NUDCQ9Y266 331 aa15.7■□□□□ 0.1
SHPRH-207ENST00000519632 PLCB2Q00722 1185 aa15.69■□□□□ 0.1
SHPRH-207ENST00000519632 PTMSP20962 102 aa15.69■□□□□ 0.1
SHPRH-207ENST00000519632 RCAN3Q9UKA8 241 aa15.69■□□□□ 0.1
SHPRH-207ENST00000519632 IL27Q8NEV9 243 aa15.68■□□□□ 0.1
SHPRH-207ENST00000519632 GBP4Q96PP9 640 aa15.67■□□□□ 0.1
SHPRH-207ENST00000519632 PDE4AP27815 886 aa15.66■□□□□ 0.1
SHPRH-207ENST00000519632 FTSJ3Q8IY81 847 aaKnown RBP15.66■□□□□ 0.1
SHPRH-207ENST00000519632 HSPA5P11021 654 aaKnown RBP15.66■□□□□ 0.1
SHPRH-207ENST00000519632 RB1CC1Q8TDY2 1594 aa15.66■□□□□ 0.1
SHPRH-207ENST00000519632 CASC1Q6TDU7 716 aa15.64■□□□□ 0.09
SHPRH-207ENST00000519632 FRAT1Q92837 279 aaPredicted RBP15.63■□□□□ 0.09
SHPRH-207ENST00000519632 SETD5Q9C0A6 1442 aa15.62■□□□□ 0.09
SHPRH-207ENST00000519632 TPRNQ4KMQ1 711 aa15.62■□□□□ 0.09
SHPRH-207ENST00000519632 CARD11Q9BXL7 1154 aa15.62■□□□□ 0.09
SHPRH-207ENST00000519632 KIAA2012Q0VF49 1180 aa15.61■□□□□ 0.09
SHPRH-207ENST00000519632 VPS8Q8N3P4 1428 aa15.6■□□□□ 0.09
SHPRH-207ENST00000519632 KNSTRNQ9Y448 316 aa15.6■□□□□ 0.09
SHPRH-207ENST00000519632 SLC4A3P48751 1232 aa15.59■□□□□ 0.09
SHPRH-207ENST00000519632 TSPY4P0CV99 314 aa15.59■□□□□ 0.09
SHPRH-207ENST00000519632 TSPY10P0CW01 314 aa15.59■□□□□ 0.09
SHPRH-207ENST00000519632 ZBTB7CA1YPR0 619 aa15.58■□□□□ 0.08
SHPRH-207ENST00000519632 PPP1R15AO75807 674 aaPredicted RBP15.58■□□□□ 0.08
SHPRH-207ENST00000519632 NPM1P06748 294 aaKnown RBP eCLIP15.57■□□□□ 0.08
SHPRH-207ENST00000519632 PODXL2Q9NZ53 605 aa15.57■□□□□ 0.08
SHPRH-207ENST00000519632 TNNT3P45378 269 aaPredicted RBP15.57■□□□□ 0.08
SHPRH-207ENST00000519632 ESF1Q9H501 851 aaKnown RBP15.57■□□□□ 0.08
SHPRH-207ENST00000519632 BRPF3Q9ULD4 1205 aa15.57■□□□□ 0.08
SHPRH-207ENST00000519632 NACADO15069 1562 aa15.56■□□□□ 0.08
SHPRH-207ENST00000519632 RAB3GAP2Q9H2M9 1393 aa15.55■□□□□ 0.08
SHPRH-207ENST00000519632 CHGAP10645 457 aaKnown RBP15.55■□□□□ 0.08
SHPRH-207ENST00000519632 MS4A1P11836 297 aa15.55■□□□□ 0.08
SHPRH-207ENST00000519632 ZRSR1Q15695 479 aaKnown RBP15.55■□□□□ 0.08
SHPRH-207ENST00000519632 DHX57Q6P158 1386 aaKnown RBP15.55■□□□□ 0.08
SHPRH-207ENST00000519632 WRNQ14191 1432 aaPredicted RBP eCLIP15.54■□□□□ 0.08
SHPRH-207ENST00000519632 GOLGA6L6A8MZA4 724 aa15.54■□□□□ 0.08
SHPRH-207ENST00000519632 CC2D1BQ5T0F9 858 aaKnown RBP15.53■□□□□ 0.08
SHPRH-207ENST00000519632 A0A0U1RQG5 324 aaPredicted RBP15.53■□□□□ 0.08
SHPRH-207ENST00000519632 ZBED9Q6R2W3 1325 aa15.53■□□□□ 0.08
SHPRH-207ENST00000519632 NFKBIBQ15653 356 aa15.52■□□□□ 0.08
SHPRH-207ENST00000519632 DDX11L8A8MPP1 907 aa15.52■□□□□ 0.07
SHPRH-207ENST00000519632 FAM161AQ3B820 660 aa15.51■□□□□ 0.07
SHPRH-207ENST00000519632 FAM43AQ8N2R8 423 aa15.51■□□□□ 0.07
SHPRH-207ENST00000519632 STAG3Q9UJ98 1225 aa15.51■□□□□ 0.07
SHPRH-207ENST00000519632 NEUROD2Q15784 382 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms