RNA–Protein interactions for RNA: ENST00000519632.5

SHPRH-207, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 5,245 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-207ENST00000519632 PELP1Q8IZL8 1130 aaKnown RBP20■□□□□ 0.79
SHPRH-207ENST00000519632 DCAF8L2P0C7V8 631 aa19.85■□□□□ 0.77
SHPRH-207ENST00000519632 MYT1Q01538 1121 aa19.77■□□□□ 0.76
SHPRH-207ENST00000519632 SUPT5HO00267 1087 aaKnown RBP19.66■□□□□ 0.74
SHPRH-207ENST00000519632 NISCHQ9Y2I1 1504 aa19.52■□□□□ 0.72
SHPRH-207ENST00000519632 PCGF6Q9BYE7 350 aa19.39■□□□□ 0.7
SHPRH-207ENST00000519632 CENPBP07199 599 aaPredicted RBP19.23■□□□□ 0.67
SHPRH-207ENST00000519632 ZEB1P37275 1124 aaPredicted RBP19.12■□□□□ 0.65
SHPRH-207ENST00000519632 SHROOM4Q9ULL8 1493 aa19.1■□□□□ 0.65
SHPRH-207ENST00000519632 HRCP23327 699 aa19.03■□□□□ 0.64
SHPRH-207ENST00000519632 EHMT2Q96KQ7 1210 aa18.84■□□□□ 0.61
SHPRH-207ENST00000519632 ERICH6Q7L0X2 663 aa18.84■□□□□ 0.61
SHPRH-207ENST00000519632 CCER1Q8TC90 406 aaPredicted RBP18.67■□□□□ 0.58
SHPRH-207ENST00000519632 YTHDC1Q96MU7 727 aaKnown RBP18.58■□□□□ 0.57
SHPRH-207ENST00000519632 PPARGC1BQ86YN6 1023 aaKnown RBP18.56■□□□□ 0.56
SHPRH-207ENST00000519632 TRIM26Q12899 539 aaPredicted RBP18.5■□□□□ 0.55
SHPRH-207ENST00000519632 FAM9AQ8IZU1 332 aaPredicted RBP18.47■□□□□ 0.55
SHPRH-207ENST00000519632 APLP2Q06481 763 aa18.41■□□□□ 0.54
SHPRH-207ENST00000519632 TTBK1Q5TCY1 1321 aaPredicted RBP18.4■□□□□ 0.54
SHPRH-207ENST00000519632 NEFLP07196 543 aa18.37■□□□□ 0.53
SHPRH-207ENST00000519632 TRIM41Q8WV44 630 aa18.15■□□□□ 0.5
SHPRH-207ENST00000519632 GTF3C3Q9Y5Q9 886 aa18.15■□□□□ 0.5
SHPRH-207ENST00000519632 DIEXFQ68CQ4 756 aaKnown RBP18.06■□□□□ 0.48
SHPRH-207ENST00000519632 CHIC1Q5VXU3 224 aa17.99■□□□□ 0.47
SHPRH-207ENST00000519632 ACIN1Q9UKV3 1341 aaKnown RBP17.98■□□□□ 0.47
SHPRH-207ENST00000519632 LOC105371045A0A1W2PR82 267 aa17.95■□□□□ 0.46
SHPRH-207ENST00000519632 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.79■□□□□ 0.44
SHPRH-207ENST00000519632 RTL5Q5HYW3 569 aaPredicted RBP17.78■□□□□ 0.44
SHPRH-207ENST00000519632 SCAF1Q9H7N4 1312 aaKnown RBP17.76■□□□□ 0.43
SHPRH-207ENST00000519632 UBTFP17480 764 aaKnown RBP17.75■□□□□ 0.43
SHPRH-207ENST00000519632 RANGAP1P46060 587 aaPredicted RBP17.7■□□□□ 0.42
SHPRH-207ENST00000519632 DAXXQ9UER7 740 aaPredicted RBP17.68■□□□□ 0.42
SHPRH-207ENST00000519632 BCANQ96GW7 911 aa17.6■□□□□ 0.41
SHPRH-207ENST00000519632 NEUROD1Q13562 356 aa17.56■□□□□ 0.4
SHPRH-207ENST00000519632 HNRNPUL2Q1KMD3 747 aaKnown RBP17.53■□□□□ 0.4
SHPRH-207ENST00000519632 ZNF316A6NFI3 1004 aaPredicted RBP17.52■□□□□ 0.4
SHPRH-207ENST00000519632 CDK11AQ9UQ88 783 aaPredicted RBP17.46■□□□□ 0.39
SHPRH-207ENST00000519632 CLSPNQ9HAW4 1339 aa17.46■□□□□ 0.39
SHPRH-207ENST00000519632 ATP1B4Q9UN42 357 aaPredicted RBP17.37■□□□□ 0.37
SHPRH-207ENST00000519632 MYT1LQ9UL68 1186 aa17.34■□□□□ 0.37
SHPRH-207ENST00000519632 DCAF1Q9Y4B6 1507 aa17.32■□□□□ 0.36
SHPRH-207ENST00000519632 ITGAEP38570 1179 aa17.29■□□□□ 0.36
SHPRH-207ENST00000519632 ANP32EQ9BTT0 268 aa17.27■□□□□ 0.35
SHPRH-207ENST00000519632 EIF5BO60841 1220 aaKnown RBP17.25■□□□□ 0.35
SHPRH-207ENST00000519632 BCL11AQ9H165 835 aa17.18■□□□□ 0.34
SHPRH-207ENST00000519632 FKBP8Q14318 412 aa17.18■□□□□ 0.34
SHPRH-207ENST00000519632 ANP32AP39687 249 aaKnown RBP17.16■□□□□ 0.34
SHPRH-207ENST00000519632 ANP32CO43423 234 aa17.16■□□□□ 0.34
SHPRH-207ENST00000519632 POLR3GLQ9BT43 218 aa17.14■□□□□ 0.33
SHPRH-207ENST00000519632 GLIPR1L2Q4G1C9 344 aa17.12■□□□□ 0.33
SHPRH-207ENST00000519632 CNGB1Q14028 1251 aaPredicted RBP17.08■□□□□ 0.32
SHPRH-207ENST00000519632 NBR1Q14596 966 aa16.99■□□□□ 0.31
SHPRH-207ENST00000519632 MIER1Q8N108 512 aa16.99■□□□□ 0.31
SHPRH-207ENST00000519632 NPM2Q86SE8 214 aaKnown RBP16.92■□□□□ 0.3
SHPRH-207ENST00000519632 ZBTB47Q9UFB7 747 aaPredicted RBP16.87■□□□□ 0.29
SHPRH-207ENST00000519632 CCDC180Q9P1Z9 1646 aa16.85■□□□□ 0.29
SHPRH-207ENST00000519632 MYO15BQ96JP2 1530 aa16.83■□□□□ 0.28
SHPRH-207ENST00000519632 FAM50AQ14320 339 aaKnown RBP16.79■□□□□ 0.28
SHPRH-207ENST00000519632 HNRNPUQ00839 825 aaKnown RBP eCLIP16.76■□□□□ 0.27
SHPRH-207ENST00000519632 SUPT16HQ9Y5B9 1047 aaKnown RBP16.76■□□□□ 0.27
SHPRH-207ENST00000519632 TRIM52Q96A61 297 aa16.73■□□□□ 0.27
SHPRH-207ENST00000519632 DDX10Q13206 875 aaKnown RBP16.71■□□□□ 0.27
SHPRH-207ENST00000519632 CSRNP3Q8WYN3 585 aa16.69■□□□□ 0.26
SHPRH-207ENST00000519632 CCDC136Q96JN2 1154 aa16.66■□□□□ 0.26
SHPRH-207ENST00000519632 IRX6P78412 446 aaPredicted RBP16.63■□□□□ 0.25
SHPRH-207ENST00000519632 RTN4Q9NQC3 1192 aaKnown RBP16.63■□□□□ 0.25
SHPRH-207ENST00000519632 ANP32BQ92688 251 aaKnown RBP16.62■□□□□ 0.25
SHPRH-207ENST00000519632 DEKP35659 375 aaKnown RBP16.62■□□□□ 0.25
SHPRH-207ENST00000519632 ABCC9O60706 1549 aa16.57■□□□□ 0.24
SHPRH-207ENST00000519632 RBM19Q9Y4C8 960 aaKnown RBP16.55■□□□□ 0.24
SHPRH-207ENST00000519632 FAM9BQ8IZU0 186 aa16.54■□□□□ 0.24
SHPRH-207ENST00000519632 NOP58Q9Y2X3 529 aaKnown RBP16.54■□□□□ 0.24
SHPRH-207ENST00000519632 NEFMP07197 916 aa16.54■□□□□ 0.24
SHPRH-207ENST00000519632 TSHZ2Q9NRE2 1034 aa16.53■□□□□ 0.24
SHPRH-207ENST00000519632 CANXP27824 592 aaKnown RBP16.5■□□□□ 0.23
SHPRH-207ENST00000519632 ERICH6BQ5W0A0 696 aa16.5■□□□□ 0.23
SHPRH-207ENST00000519632 ARXQ96QS3 562 aa16.49■□□□□ 0.23
SHPRH-207ENST00000519632 PABPN1Q86U42 306 aaKnown RBP eCLIP16.48■□□□□ 0.23
SHPRH-207ENST00000519632 DDRGK1Q96HY6 314 aa16.48■□□□□ 0.23
SHPRH-207ENST00000519632 PPM1GO15355 546 aaPredicted RBP16.47■□□□□ 0.23
SHPRH-207ENST00000519632 ZNF326Q5BKZ1 582 aaKnown RBP16.47■□□□□ 0.23
SHPRH-207ENST00000519632 UPF2Q9HAU5 1272 aaKnown RBP16.46■□□□□ 0.22
SHPRH-207ENST00000519632 TONSLQ96HA7 1378 aa16.45■□□□□ 0.22
SHPRH-207ENST00000519632 SLC4A1APQ9BWU0 796 aaKnown RBP16.41■□□□□ 0.22
SHPRH-207ENST00000519632 PPP4R2Q9NY27 417 aa16.4■□□□□ 0.22
SHPRH-207ENST00000519632 MRS2Q9HD23 443 aa16.39■□□□□ 0.21
SHPRH-207ENST00000519632 HSP90AA1P07900 732 aaKnown RBP16.37■□□□□ 0.21
SHPRH-207ENST00000519632 NAP1L5Q96NT1 182 aaPredicted RBP16.37■□□□□ 0.21
SHPRH-207ENST00000519632 LAS1LQ9Y4W2 734 aaKnown RBP16.37■□□□□ 0.21
SHPRH-207ENST00000519632 TRIM44Q96DX7 344 aaPredicted RBP16.34■□□□□ 0.21
SHPRH-207ENST00000519632 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.33■□□□□ 0.21
SHPRH-207ENST00000519632 TNNT2P45379 298 aaPredicted RBP16.3■□□□□ 0.2
SHPRH-207ENST00000519632 HIRIP3Q9BW71 556 aaPredicted RBP16.29■□□□□ 0.2
SHPRH-207ENST00000519632 TMC1Q8TDI8 760 aa16.28■□□□□ 0.2
SHPRH-207ENST00000519632 BECN1Q14457 450 aa16.27■□□□□ 0.2
SHPRH-207ENST00000519632 SALL2Q9Y467 1007 aaPredicted RBP16.27■□□□□ 0.19
SHPRH-207ENST00000519632 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.25■□□□□ 0.19
SHPRH-207ENST00000519632 B4GALNT3Q6L9W6 998 aa16.22■□□□□ 0.19
SHPRH-207ENST00000519632 ZCCHC6Q5VYS8 1495 aaKnown RBP16.19■□□□□ 0.18
SHPRH-207ENST00000519632 CEP162Q5TB80 1403 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms