RNA–Protein interactions for RNA: ENST00000519116.5

CTNNA1-214, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-214ENST00000519116 CUX1P39880 1505 aa11.97□□□□□ -0.49
CTNNA1-214ENST00000519116 RNF39Q9H2S5 420 aa11.96□□□□□ -0.49
CTNNA1-214ENST00000519116 ABCA10Q8WWZ4 1543 aa11.91□□□□□ -0.5
CTNNA1-214ENST00000519116 GRIN2AQ12879 1464 aa11.9□□□□□ -0.5
CTNNA1-214ENST00000519116 NUP160Q12769 1436 aa11.9□□□□□ -0.5
CTNNA1-214ENST00000519116 ERCC6L2Q5T890 1561 aa11.89□□□□□ -0.51
CTNNA1-214ENST00000519116 CEP170Q5SW79 1584 aa11.87□□□□□ -0.51
CTNNA1-214ENST00000519116 FAM69CQ0P6D2 419 aa11.85□□□□□ -0.51
CTNNA1-214ENST00000519116 ABCA5Q8WWZ7 1642 aa11.85□□□□□ -0.51
CTNNA1-214ENST00000519116 FHAD1B1AJZ9 1412 aa11.84□□□□□ -0.51
CTNNA1-214ENST00000519116 PBRM1Q86U86 1689 aa11.84□□□□□ -0.51
CTNNA1-214ENST00000519116 NPM1P06748 294 aaKnown RBP eCLIP11.83□□□□□ -0.52
CTNNA1-214ENST00000519116 WRNQ14191 1432 aaPredicted RBP eCLIP11.83□□□□□ -0.52
CTNNA1-214ENST00000519116 KDM4FA0A1W2PPD8 638 aa11.82□□□□□ -0.52
CTNNA1-214ENST00000519116 ILDR1Q86SU0 546 aaPredicted RBP11.82□□□□□ -0.52
CTNNA1-214ENST00000519116 PRG4Q92954 1404 aaPredicted RBP11.82□□□□□ -0.52
CTNNA1-214ENST00000519116 JPH4Q96JJ6 628 aa11.81□□□□□ -0.52
CTNNA1-214ENST00000519116 ABCC10Q5T3U5 1492 aa11.81□□□□□ -0.52
CTNNA1-214ENST00000519116 ADAMTS12P58397 1594 aa11.8□□□□□ -0.52
CTNNA1-214ENST00000519116 SHROOM2Q13796 1616 aa11.78□□□□□ -0.52
CTNNA1-214ENST00000519116 NCBP3Q53F19 620 aaKnown RBP11.76□□□□□ -0.53
CTNNA1-214ENST00000519116 MAPKBP1O60336 1514 aa11.75□□□□□ -0.53
CTNNA1-214ENST00000519116 C1QBPQ07021 282 aaKnown RBP11.74□□□□□ -0.53
CTNNA1-214ENST00000519116 ERICH3Q5RHP9 1530 aa11.74□□□□□ -0.53
CTNNA1-214ENST00000519116 KIF13AQ9H1H9 1805 aa11.72□□□□□ -0.53
CTNNA1-214ENST00000519116 NPM3O75607 178 aaKnown RBP11.7□□□□□ -0.54
CTNNA1-214ENST00000519116 DIP2BQ9P265 1576 aa11.7□□□□□ -0.54
CTNNA1-214ENST00000519116 KDM6BO15054 1643 aa11.69□□□□□ -0.54
CTNNA1-214ENST00000519116 TOP2BQ02880 1626 aa11.66□□□□□ -0.54
CTNNA1-214ENST00000519116 ADCY10Q96PN6 1610 aa11.64□□□□□ -0.55
CTNNA1-214ENST00000519116 RUSC2Q8N2Y8 1516 aa11.63□□□□□ -0.55
CTNNA1-214ENST00000519116 KIAA0586Q9BVV6 1533 aa11.62□□□□□ -0.55
CTNNA1-214ENST00000519116 PTPRGP23470 1445 aa11.61□□□□□ -0.55
CTNNA1-214ENST00000519116 BIVM-ERCC5R4GMW8 1640 aa11.61□□□□□ -0.55
CTNNA1-214ENST00000519116 ADGRL1O94910 1474 aa11.6□□□□□ -0.55
CTNNA1-214ENST00000519116 SUPT5HO00267 1087 aaKnown RBP11.58□□□□□ -0.56
CTNNA1-214ENST00000519116 PLB1Q6P1J6 1458 aa11.57□□□□□ -0.56
CTNNA1-214ENST00000519116 IGF1RP08069 1367 aa11.56□□□□□ -0.56
CTNNA1-214ENST00000519116 ABCC2Q92887 1545 aa11.56□□□□□ -0.56
CTNNA1-214ENST00000519116 ASXL2Q76L83 1435 aa11.56□□□□□ -0.56
CTNNA1-214ENST00000519116 TNIKQ9UKE5 1360 aa11.55□□□□□ -0.56
CTNNA1-214ENST00000519116 TTBK1Q5TCY1 1321 aaPredicted RBP11.55□□□□□ -0.56
CTNNA1-214ENST00000519116 CARMIL2Q6F5E8 1435 aa11.54□□□□□ -0.56
CTNNA1-214ENST00000519116 GLI2P10070 1586 aa11.54□□□□□ -0.56
CTNNA1-214ENST00000519116 HECW2Q9P2P5 1572 aa11.52□□□□□ -0.57
CTNNA1-214ENST00000519116 KIF27Q86VH2 1401 aa11.52□□□□□ -0.57
CTNNA1-214ENST00000519116 COL17A1Q9UMD9 1497 aaPredicted RBP11.51□□□□□ -0.57
CTNNA1-214ENST00000519116 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.51□□□□□ -0.579e-8■□□□□ 9.6
CTNNA1-214ENST00000519116 TSPOAP1O95153 1857 aa11.51□□□□□ -0.57
CTNNA1-214ENST00000519116 UHRF1BP1LA0JNW5 1464 aa11.51□□□□□ -0.57
CTNNA1-214ENST00000519116 TEX14Q8IWB6 1497 aa11.51□□□□□ -0.57
CTNNA1-214ENST00000519116 FBXO41Q8TF61 875 aa11.49□□□□□ -0.57
CTNNA1-214ENST00000519116 UACAQ9BZF9 1416 aa11.49□□□□□ -0.57
CTNNA1-214ENST00000519116 CARMIL1Q5VZK9 1371 aa11.48□□□□□ -0.57
CTNNA1-214ENST00000519116 EPRSP07814 1512 aaKnown RBP11.48□□□□□ -0.57
CTNNA1-214ENST00000519116 PPRC1Q5VV67 1664 aaKnown RBP11.45□□□□□ -0.58
CTNNA1-214ENST00000519116 KDM5BQ9UGL1 1544 aa11.45□□□□□ -0.58
CTNNA1-214ENST00000519116 CUL7Q14999 1698 aa11.44□□□□□ -0.58
CTNNA1-214ENST00000519116 MAP3K4Q9Y6R4 1608 aa11.4□□□□□ -0.58
CTNNA1-214ENST00000519116 KCNA4P22459 653 aa11.4□□□□□ -0.58
CTNNA1-214ENST00000519116 IQGAP2Q13576 1575 aa11.4□□□□□ -0.58
CTNNA1-214ENST00000519116 DISP1Q96F81 1524 aa11.4□□□□□ -0.59
CTNNA1-214ENST00000519116 WDR7Q9Y4E6 1490 aa11.39□□□□□ -0.59
CTNNA1-214ENST00000519116 CD109Q6YHK3 1445 aa11.38□□□□□ -0.59
CTNNA1-214ENST00000519116 MAGI3Q5TCQ9 1506 aa11.37□□□□□ -0.59
CTNNA1-214ENST00000519116 U3KPZ7 1027 aaPredicted RBP11.36□□□□□ -0.59
CTNNA1-214ENST00000519116 KCNH8Q96L42 1107 aa11.35□□□□□ -0.59
CTNNA1-214ENST00000519116 UGGT2Q9NYU1 1516 aa11.35□□□□□ -0.59
CTNNA1-214ENST00000519116 ZCCHC11Q5TAX3 1644 aaKnown RBP11.32□□□□□ -0.6
CTNNA1-214ENST00000519116 RAPGEF2Q9Y4G8 1499 aa11.31□□□□□ -0.6
CTNNA1-214ENST00000519116 PTPRMP28827 1452 aa11.3□□□□□ -0.6
CTNNA1-214ENST00000519116 ARAP3Q8WWN8 1544 aa11.29□□□□□ -0.6
CTNNA1-214ENST00000519116 PHLDB1Q86UU1 1377 aa11.28□□□□□ -0.6
CTNNA1-214ENST00000519116 KIAA0556O60303 1618 aa11.28□□□□□ -0.6
CTNNA1-214ENST00000519116 FAM9AQ8IZU1 332 aaPredicted RBP11.26□□□□□ -0.61
CTNNA1-214ENST00000519116 GOLGA3Q08378 1498 aa11.25□□□□□ -0.61
CTNNA1-214ENST00000519116 LMTK3Q96Q04 1460 aa11.25□□□□□ -0.61
CTNNA1-214ENST00000519116 CFAP43Q8NDM7 1665 aa11.24□□□□□ -0.61
CTNNA1-214ENST00000519116 SLC4A2P04920 1241 aa11.24□□□□□ -0.61
CTNNA1-214ENST00000519116 ARID4BQ4LE39 1312 aaPredicted RBP11.24□□□□□ -0.61
CTNNA1-214ENST00000519116 KIF21BO75037 1637 aa11.24□□□□□ -0.61
CTNNA1-214ENST00000519116 RAPGEF3O95398 923 aa11.23□□□□□ -0.61
CTNNA1-214ENST00000519116 PCF11O94913 1555 aaKnown RBP11.23□□□□□ -0.61
CTNNA1-214ENST00000519116 ABCA8O94911 1581 aa11.22□□□□□ -0.61
CTNNA1-214ENST00000519116 SPINK5Q9NQ38 1064 aaPredicted RBP11.21□□□□□ -0.61
CTNNA1-214ENST00000519116 CERKQ8TCT0 537 aa11.2□□□□□ -0.62
CTNNA1-214ENST00000519116 ADAMTSL3P82987 1691 aa11.2□□□□□ -0.62
CTNNA1-214ENST00000519116 ARID3CA6NKF2 412 aa11.19□□□□□ -0.62
CTNNA1-214ENST00000519116 NEO1Q92859 1461 aa11.19□□□□□ -0.62
CTNNA1-214ENST00000519116 ATP10BO94823 1461 aa11.18□□□□□ -0.62
CTNNA1-214ENST00000519116 HSPA2P54652 639 aa11.17□□□□□ -0.62
CTNNA1-214ENST00000519116 SOCS7O14512 581 aa11.16□□□□□ -0.62
CTNNA1-214ENST00000519116 DSG3P32926 999 aa11.16□□□□□ -0.62
CTNNA1-214ENST00000519116 DISP3Q9P2K9 1392 aa11.15□□□□□ -0.63
CTNNA1-214ENST00000519116 POGZQ7Z3K3 1410 aa11.14□□□□□ -0.63
CTNNA1-214ENST00000519116 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.13□□□□□ -0.63
CTNNA1-214ENST00000519116 HNRNPUL2Q1KMD3 747 aaKnown RBP11.13□□□□□ -0.63
CTNNA1-214ENST00000519116 ILDR2Q71H61 639 aa11.13□□□□□ -0.63
CTNNA1-214ENST00000519116 ABCA9Q8IUA7 1624 aa11.13□□□□□ -0.63
CTNNA1-214ENST00000519116 MADDQ8WXG6 1647 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms