RNA–Protein interactions for RNA: ENST00000519116.5

CTNNA1-214, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-214ENST00000519116 AEBP2Q6ZN18 517 aaPredicted RBP18.83■□□□□ 0.6
CTNNA1-214ENST00000519116 CHIC1Q5VXU3 224 aa17.74■□□□□ 0.43
CTNNA1-214ENST00000519116 NISCHQ9Y2I1 1504 aa16.53■□□□□ 0.24
CTNNA1-214ENST00000519116 SENP3Q9H4L4 574 aaPredicted RBP15.96■□□□□ 0.15
CTNNA1-214ENST00000519116 PHF23Q9BUL5 403 aaPredicted RBP15.77■□□□□ 0.12
CTNNA1-214ENST00000519116 ABCC9O60706 1549 aa15.32■□□□□ 0.04
CTNNA1-214ENST00000519116 FOXD1Q16676 465 aa14.96□□□□□ -0.01
CTNNA1-214ENST00000519116 CCDC180Q9P1Z9 1646 aa14.88□□□□□ -0.03
CTNNA1-214ENST00000519116 DNAJC5BQ9UF47 199 aa14.71□□□□□ -0.05
CTNNA1-214ENST00000519116 RB1CC1Q8TDY2 1594 aa14.41□□□□□ -0.1
CTNNA1-214ENST00000519116 PABPN1Q86U42 306 aaKnown RBP eCLIP14.26□□□□□ -0.13
CTNNA1-214ENST00000519116 NACADO15069 1562 aa14.25□□□□□ -0.13
CTNNA1-214ENST00000519116 DCAF8L2P0C7V8 631 aa14.16□□□□□ -0.14
CTNNA1-214ENST00000519116 PLPPR3Q6T4P5 718 aa14.07□□□□□ -0.16
CTNNA1-214ENST00000519116 MYO15BQ96JP2 1530 aa13.97□□□□□ -0.17
CTNNA1-214ENST00000519116 BICRAQ9NZM4 1560 aa13.96□□□□□ -0.17
CTNNA1-214ENST00000519116 MSH5O43196 834 aa13.95□□□□□ -0.18
CTNNA1-214ENST00000519116 PPP6R1Q9UPN7 881 aa13.95□□□□□ -0.18
CTNNA1-214ENST00000519116 PIAS4Q8N2W9 510 aaPredicted RBP13.87□□□□□ -0.19
CTNNA1-214ENST00000519116 UNC13AQ9UPW8 1703 aa13.87□□□□□ -0.19
CTNNA1-214ENST00000519116 CECR2Q9BXF3 1484 aa13.87□□□□□ -0.19
CTNNA1-214ENST00000519116 ADRA2BP18089 450 aa13.85□□□□□ -0.19
CTNNA1-214ENST00000519116 SHROOM4Q9ULL8 1493 aa13.84□□□□□ -0.19
CTNNA1-214ENST00000519116 POTEDQ86YR6 584 aa13.83□□□□□ -0.2
CTNNA1-214ENST00000519116 DNAJC5Q9H3Z4 198 aa13.8□□□□□ -0.2
CTNNA1-214ENST00000519116 CC2D2AQ9P2K1 1620 aa13.77□□□□□ -0.21
CTNNA1-214ENST00000519116 EIF4G1Q04637 1599 aaKnown RBP13.68□□□□□ -0.22
CTNNA1-214ENST00000519116 DCAF1Q9Y4B6 1507 aa13.64□□□□□ -0.23
CTNNA1-214ENST00000519116 ZCCHC6Q5VYS8 1495 aaKnown RBP13.62□□□□□ -0.23
CTNNA1-214ENST00000519116 SCRIBQ14160 1630 aa13.57□□□□□ -0.24
CTNNA1-214ENST00000519116 CUX2O14529 1486 aa13.38□□□□□ -0.27
CTNNA1-214ENST00000519116 ERCC6Q03468 1493 aa13.29□□□□□ -0.28
CTNNA1-214ENST00000519116 NCAPD3P42695 1498 aa13.2□□□□□ -0.3
CTNNA1-214ENST00000519116 ATAD2BQ9ULI0 1458 aa13.1□□□□□ -0.31
CTNNA1-214ENST00000519116 TRIM41Q8WV44 630 aa13.04□□□□□ -0.32
CTNNA1-214ENST00000519116 NESP48681 1621 aa13.03□□□□□ -0.32
CTNNA1-214ENST00000519116 HMGXB3Q12766 1538 aa13.02□□□□□ -0.33
CTNNA1-214ENST00000519116 SMARCA2P51531 1590 aa13.02□□□□□ -0.33
CTNNA1-214ENST00000519116 BAZ1BQ9UIG0 1483 aaKnown RBP12.94□□□□□ -0.34
CTNNA1-214ENST00000519116 THOC2Q8NI27 1593 aaKnown RBP12.93□□□□□ -0.34
CTNNA1-214ENST00000519116 PDS5BQ9NTI5 1447 aa12.92□□□□□ -0.34
CTNNA1-214ENST00000519116 SMARCA4P51532 1647 aa12.91□□□□□ -0.34
CTNNA1-214ENST00000519116 LAMC3Q9Y6N6 1575 aa12.9□□□□□ -0.35
CTNNA1-214ENST00000519116 BAZ1AQ9NRL2 1556 aaPredicted RBP12.85□□□□□ -0.35
CTNNA1-214ENST00000519116 PEG3Q9GZU2 1588 aa12.81□□□□□ -0.36
CTNNA1-214ENST00000519116 CADPSQ9ULU8 1353 aa12.81□□□□□ -0.36
CTNNA1-214ENST00000519116 MRC2Q9UBG0 1479 aa12.78□□□□□ -0.36
CTNNA1-214ENST00000519116 MAPK8IP2Q13387 824 aaPredicted RBP12.77□□□□□ -0.37
CTNNA1-214ENST00000519116 OSCARQ8IYS5 282 aa12.76□□□□□ -0.37
CTNNA1-214ENST00000519116 KIF21AQ7Z4S6 1674 aa12.73□□□□□ -0.37
CTNNA1-214ENST00000519116 WDR62O43379 1518 aa12.73□□□□□ -0.37
CTNNA1-214ENST00000519116 MROH2BQ7Z745 1585 aa12.71□□□□□ -0.37
CTNNA1-214ENST00000519116 DMRT2Q9Y5R5 561 aa12.69□□□□□ -0.38
CTNNA1-214ENST00000519116 CEP164Q9UPV0 1460 aa12.66□□□□□ -0.38
CTNNA1-214ENST00000519116 FANCD2Q9BXW9 1451 aa12.62□□□□□ -0.39
CTNNA1-214ENST00000519116 CFTRP13569 1480 aa12.56□□□□□ -0.4
CTNNA1-214ENST00000519116 SCAF1Q9H7N4 1312 aaKnown RBP12.56□□□□□ -0.4
CTNNA1-214ENST00000519116 URB2Q14146 1524 aaKnown RBP12.51□□□□□ -0.41
CTNNA1-214ENST00000519116 RIMBP3CA6NJZ7 1639 aa12.48□□□□□ -0.41
CTNNA1-214ENST00000519116 RIMBP3BA6NNM3 1639 aa12.48□□□□□ -0.41
CTNNA1-214ENST00000519116 RIMBP3Q9UFD9 1639 aa12.48□□□□□ -0.41
CTNNA1-214ENST00000519116 ARHGEF11O15085 1522 aa12.47□□□□□ -0.41
CTNNA1-214ENST00000519116 CYB5RLQ6IPT4 315 aa12.47□□□□□ -0.41
CTNNA1-214ENST00000519116 WIZO95785 1651 aa12.47□□□□□ -0.41
CTNNA1-214ENST00000519116 TRHP20396 242 aaPredicted RBP12.45□□□□□ -0.42
CTNNA1-214ENST00000519116 IFT140Q96RY7 1462 aa12.44□□□□□ -0.42
CTNNA1-214ENST00000519116 ZNF608Q9ULD9 1512 aaPredicted RBP12.42□□□□□ -0.42
CTNNA1-214ENST00000519116 RSF1Q96T23 1441 aaPredicted RBP12.37□□□□□ -0.43
CTNNA1-214ENST00000519116 TOP2AP11388 1531 aaKnown RBP12.37□□□□□ -0.43
CTNNA1-214ENST00000519116 PPP4R3CPQ6ZMV5 832 aa12.34□□□□□ -0.43
CTNNA1-214ENST00000519116 ARAP1Q96P48 1450 aa12.34□□□□□ -0.43
CTNNA1-214ENST00000519116 TOPBP1Q92547 1522 aa12.32□□□□□ -0.44
CTNNA1-214ENST00000519116 ABCC8Q09428 1581 aa12.31□□□□□ -0.44
CTNNA1-214ENST00000519116 FBLN2P98095 1184 aa12.31□□□□□ -0.44
CTNNA1-214ENST00000519116 AQRO60306 1485 aaKnown RBP eCLIP12.28□□□□□ -0.448e-7■■■■■ 28.7
CTNNA1-214ENST00000519116 EIF4G3O43432 1585 aaKnown RBP12.27□□□□□ -0.44
CTNNA1-214ENST00000519116 CCDC88BA6NC98 1476 aa12.25□□□□□ -0.45
CTNNA1-214ENST00000519116 DNMBPQ6XZF7 1577 aa12.22□□□□□ -0.45
CTNNA1-214ENST00000519116 HOXD11P31277 338 aaPredicted RBP12.21□□□□□ -0.45
CTNNA1-214ENST00000519116 CHMP7Q8WUX9 453 aaPredicted RBP12.18□□□□□ -0.46
CTNNA1-214ENST00000519116 POLA1P09884 1462 aaPredicted RBP12.18□□□□□ -0.46
CTNNA1-214ENST00000519116 TARBP1Q13395 1621 aaKnown RBP12.18□□□□□ -0.46
CTNNA1-214ENST00000519116 TDRD9Q8NDG6 1382 aaKnown RBP12.18□□□□□ -0.46
CTNNA1-214ENST00000519116 PRDM2Q13029 1718 aa12.17□□□□□ -0.46
CTNNA1-214ENST00000519116 CHD1O14646 1710 aa12.16□□□□□ -0.46
CTNNA1-214ENST00000519116 SOGA1O94964 1423 aa12.15□□□□□ -0.46
CTNNA1-214ENST00000519116 SNAPC4Q5SXM2 1469 aa12.14□□□□□ -0.47
CTNNA1-214ENST00000519116 RAD54L2Q9Y4B4 1467 aa12.14□□□□□ -0.47
CTNNA1-214ENST00000519116 CLASP1Q7Z460 1538 aa12.13□□□□□ -0.47
CTNNA1-214ENST00000519116 CNKSR2Q8WXI2 1034 aa12.12□□□□□ -0.47
CTNNA1-214ENST00000519116 MAGI1Q96QZ7 1491 aaPredicted RBP12.11□□□□□ -0.47
CTNNA1-214ENST00000519116 SYNJ1O43426 1573 aa12.1□□□□□ -0.47
CTNNA1-214ENST00000519116 GRIN2BQ13224 1484 aa12.08□□□□□ -0.47
CTNNA1-214ENST00000519116 SYNJ2O15056 1496 aa12.08□□□□□ -0.48
CTNNA1-214ENST00000519116 GAPVD1Q14C86 1478 aa12.08□□□□□ -0.48
CTNNA1-214ENST00000519116 WDR97A6NE52 1622 aa12.08□□□□□ -0.48
CTNNA1-214ENST00000519116 RNF216Q9NWF9 866 aaPredicted RBP12.05□□□□□ -0.48
CTNNA1-214ENST00000519116 FGD5Q6ZNL6 1462 aa12.04□□□□□ -0.48
CTNNA1-214ENST00000519116 DCAF8L1A6NGE4 600 aa12.03□□□□□ -0.48
CTNNA1-214ENST00000519116 CACNB1Q02641 598 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms