RNA–Protein interactions for RNA: ENST00000518230.5

ARFGEF1-203, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene ARFGEF1, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-203ENST00000518230 RBM19Q9Y4C8 960 aaKnown RBP13.96□□□□□ -0.17
ARFGEF1-203ENST00000518230 DNAJC5BQ9UF47 199 aa13.95□□□□□ -0.18
ARFGEF1-203ENST00000518230 ARAP1Q96P48 1450 aa13.93□□□□□ -0.18
ARFGEF1-203ENST00000518230 TRIM52Q96A61 297 aa13.91□□□□□ -0.18
ARFGEF1-203ENST00000518230 HIRIP3Q9BW71 556 aaPredicted RBP13.91□□□□□ -0.18
ARFGEF1-203ENST00000518230 CARMIL1Q5VZK9 1371 aa13.9□□□□□ -0.18
ARFGEF1-203ENST00000518230 RRBP1Q9P2E9 1410 aaKnown RBP13.89□□□□□ -0.19
ARFGEF1-203ENST00000518230 TOPBP1Q92547 1522 aa13.89□□□□□ -0.19
ARFGEF1-203ENST00000518230 DNMBPQ6XZF7 1577 aa13.89□□□□□ -0.19
ARFGEF1-203ENST00000518230 RAD54L2Q9Y4B4 1467 aa13.88□□□□□ -0.19
ARFGEF1-203ENST00000518230 NEFLP07196 543 aa13.87□□□□□ -0.19
ARFGEF1-203ENST00000518230 SIN3AQ96ST3 1273 aa13.87□□□□□ -0.19
ARFGEF1-203ENST00000518230 CCNB3Q8WWL7 1395 aa13.87□□□□□ -0.19
ARFGEF1-203ENST00000518230 POLA1P09884 1462 aaPredicted RBP13.86□□□□□ -0.19
ARFGEF1-203ENST00000518230 LAMC3Q9Y6N6 1575 aa13.86□□□□□ -0.19
ARFGEF1-203ENST00000518230 ARHGAP35Q9NRY4 1499 aa13.86□□□□□ -0.19
ARFGEF1-203ENST00000518230 RAB3GAP2Q9H2M9 1393 aa13.85□□□□□ -0.19
ARFGEF1-203ENST00000518230 MSH5O43196 834 aa13.84□□□□□ -0.19
ARFGEF1-203ENST00000518230 ABCA10Q8WWZ4 1543 aa13.84□□□□□ -0.19
ARFGEF1-203ENST00000518230 MAPKBP1O60336 1514 aa13.82□□□□□ -0.2
ARFGEF1-203ENST00000518230 WDR97A6NE52 1622 aa13.82□□□□□ -0.2
ARFGEF1-203ENST00000518230 PPP1R15AO75807 674 aaPredicted RBP13.82□□□□□ -0.2
ARFGEF1-203ENST00000518230 URB2Q14146 1524 aaKnown RBP13.82□□□□□ -0.2
ARFGEF1-203ENST00000518230 PDS5BQ9NTI5 1447 aa13.79□□□□□ -0.2
ARFGEF1-203ENST00000518230 ANP32CO43423 234 aa13.76□□□□□ -0.21
ARFGEF1-203ENST00000518230 IRX6P78412 446 aaPredicted RBP13.76□□□□□ -0.21
ARFGEF1-203ENST00000518230 SETD5Q9C0A6 1442 aa13.74□□□□□ -0.21
ARFGEF1-203ENST00000518230 TDRD9Q8NDG6 1382 aaKnown RBP13.73□□□□□ -0.21
ARFGEF1-203ENST00000518230 FAM50AQ14320 339 aaKnown RBP13.73□□□□□ -0.21
ARFGEF1-203ENST00000518230 CCER2I3L3R5 266 aa13.72□□□□□ -0.21
ARFGEF1-203ENST00000518230 KIF21AQ7Z4S6 1674 aa13.7□□□□□ -0.22
ARFGEF1-203ENST00000518230 P3H3Q8IVL6 736 aa13.7□□□□□ -0.22
ARFGEF1-203ENST00000518230 CUL7Q14999 1698 aa13.68□□□□□ -0.22
ARFGEF1-203ENST00000518230 GAPVD1Q14C86 1478 aa13.67□□□□□ -0.22
ARFGEF1-203ENST00000518230 ABCA5Q8WWZ7 1642 aa13.66□□□□□ -0.22
ARFGEF1-203ENST00000518230 ERICH6Q7L0X2 663 aa13.66□□□□□ -0.22
ARFGEF1-203ENST00000518230 PHLDB1Q86UU1 1377 aa13.66□□□□□ -0.22
ARFGEF1-203ENST00000518230 CDK11AQ9UQ88 783 aaPredicted RBP13.66□□□□□ -0.22
ARFGEF1-203ENST00000518230 HNRNPUQ00839 825 aaKnown RBP eCLIP13.65□□□□□ -0.22
ARFGEF1-203ENST00000518230 MAP3K1Q13233 1512 aa13.65□□□□□ -0.22
ARFGEF1-203ENST00000518230 ATP1B4Q9UN42 357 aaPredicted RBP13.64□□□□□ -0.23
ARFGEF1-203ENST00000518230 FANCIQ9NVI1 1328 aa13.64□□□□□ -0.23
ARFGEF1-203ENST00000518230 FHAD1B1AJZ9 1412 aa13.64□□□□□ -0.23
ARFGEF1-203ENST00000518230 TIAM1Q13009 1591 aa13.64□□□□□ -0.23
ARFGEF1-203ENST00000518230 FHOD3Q2V2M9 1422 aa13.64□□□□□ -0.23
ARFGEF1-203ENST00000518230 TARBP1Q13395 1621 aaKnown RBP13.62□□□□□ -0.23
ARFGEF1-203ENST00000518230 LRRC9Q6ZRR7 1453 aa13.61□□□□□ -0.23
ARFGEF1-203ENST00000518230 TIMELESSQ9UNS1 1208 aa13.61□□□□□ -0.23
ARFGEF1-203ENST00000518230 EFCAB5A4FU69 1503 aa13.6□□□□□ -0.23
ARFGEF1-203ENST00000518230 CTTNBP2Q8WZ74 1663 aa13.59□□□□□ -0.23
ARFGEF1-203ENST00000518230 PCF11O94913 1555 aaKnown RBP13.59□□□□□ -0.23
ARFGEF1-203ENST00000518230 MRC2Q9UBG0 1479 aa13.58□□□□□ -0.24
ARFGEF1-203ENST00000518230 AQRO60306 1485 aaKnown RBP eCLIP13.57□□□□□ -0.24
ARFGEF1-203ENST00000518230 CASKIN1Q8WXD9 1431 aa13.56□□□□□ -0.24
ARFGEF1-203ENST00000518230 TONSLQ96HA7 1378 aa13.56□□□□□ -0.24
ARFGEF1-203ENST00000518230 FYCO1Q9BQS8 1478 aa13.55□□□□□ -0.24
ARFGEF1-203ENST00000518230 FMN1Q68DA7 1419 aa13.53□□□□□ -0.24
ARFGEF1-203ENST00000518230 DEKP35659 375 aaKnown RBP13.53□□□□□ -0.24
ARFGEF1-203ENST00000518230 CCDC184Q52MB2 194 aa13.53□□□□□ -0.24
ARFGEF1-203ENST00000518230 CFAP43Q8NDM7 1665 aa13.52□□□□□ -0.24
ARFGEF1-203ENST00000518230 B4GALNT3Q6L9W6 998 aa13.52□□□□□ -0.24
ARFGEF1-203ENST00000518230 SAMD9Q5K651 1589 aa13.51□□□□□ -0.25
ARFGEF1-203ENST00000518230 SNAPC4Q5SXM2 1469 aa13.51□□□□□ -0.25
ARFGEF1-203ENST00000518230 PPP4R2Q9NY27 417 aa13.51□□□□□ -0.25
ARFGEF1-203ENST00000518230 ZNF608Q9ULD9 1512 aaPredicted RBP13.49□□□□□ -0.25
ARFGEF1-203ENST00000518230 PBRM1Q86U86 1689 aa13.48□□□□□ -0.25
ARFGEF1-203ENST00000518230 WDR62O43379 1518 aa13.48□□□□□ -0.25
ARFGEF1-203ENST00000518230 GRIN2BQ13224 1484 aa13.48□□□□□ -0.25
ARFGEF1-203ENST00000518230 IFT140Q96RY7 1462 aa13.48□□□□□ -0.25
ARFGEF1-203ENST00000518230 NBR1Q14596 966 aa13.48□□□□□ -0.25
ARFGEF1-203ENST00000518230 WASHC2AQ641Q2 1341 aa13.47□□□□□ -0.25
ARFGEF1-203ENST00000518230 FAM9BQ8IZU0 186 aa13.47□□□□□ -0.25
ARFGEF1-203ENST00000518230 ADAMTS12P58397 1594 aa13.46□□□□□ -0.26
ARFGEF1-203ENST00000518230 HSPA5P11021 654 aaKnown RBP13.45□□□□□ -0.26
ARFGEF1-203ENST00000518230 PAK3O75914 559 aaPredicted RBP13.45□□□□□ -0.26
ARFGEF1-203ENST00000518230 ERICH6BQ5W0A0 696 aa13.43□□□□□ -0.26
ARFGEF1-203ENST00000518230 CCDC18Q5T9S5 1454 aa13.43□□□□□ -0.26
ARFGEF1-203ENST00000518230 MTUS2Q5JR59 1369 aa13.42□□□□□ -0.26
ARFGEF1-203ENST00000518230 PTPRKQ15262 1439 aa13.42□□□□□ -0.26
ARFGEF1-203ENST00000518230 ERCC6Q03468 1493 aa13.41□□□□□ -0.26
ARFGEF1-203ENST00000518230 IQGAP2Q13576 1575 aa13.41□□□□□ -0.26
ARFGEF1-203ENST00000518230 LRRIQ1Q96JM4 1722 aa13.41□□□□□ -0.26
ARFGEF1-203ENST00000518230 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.41□□□□□ -0.26
ARFGEF1-203ENST00000518230 NOP58Q9Y2X3 529 aaKnown RBP13.41□□□□□ -0.26
ARFGEF1-203ENST00000518230 MYT1LQ9UL68 1186 aa13.4□□□□□ -0.26
ARFGEF1-203ENST00000518230 C11orf95C9JLR9 678 aaPredicted RBP13.39□□□□□ -0.27
ARFGEF1-203ENST00000518230 UACAQ9BZF9 1416 aa13.39□□□□□ -0.27
ARFGEF1-203ENST00000518230 MRS2Q9HD23 443 aa13.39□□□□□ -0.27
ARFGEF1-203ENST00000518230 FGD6Q6ZV73 1430 aa13.38□□□□□ -0.27
ARFGEF1-203ENST00000518230 KDM5BQ9UGL1 1544 aa13.37□□□□□ -0.27
ARFGEF1-203ENST00000518230 THOC2Q8NI27 1593 aaKnown RBP13.37□□□□□ -0.27
ARFGEF1-203ENST00000518230 PRKRIP1Q9H875 184 aaPredicted RBP13.37□□□□□ -0.27
ARFGEF1-203ENST00000518230 CNGB1Q14028 1251 aaPredicted RBP13.36□□□□□ -0.27
ARFGEF1-203ENST00000518230 NCOA2Q15596 1464 aa13.36□□□□□ -0.27
ARFGEF1-203ENST00000518230 EIF4G2P78344 907 aaKnown RBP eCLIP13.36□□□□□ -0.27
ARFGEF1-203ENST00000518230 SENP3-EIF4A1A0A087X0R7 540 aa13.35□□□□□ -0.27
ARFGEF1-203ENST00000518230 EIF4G3O43432 1585 aaKnown RBP13.35□□□□□ -0.27
ARFGEF1-203ENST00000518230 UGGT2Q9NYU1 1516 aa13.35□□□□□ -0.27
ARFGEF1-203ENST00000518230 KIAA0586Q9BVV6 1533 aa13.35□□□□□ -0.27
ARFGEF1-203ENST00000518230 HFM1A2PYH4 1435 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms