RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 MNX1P50219 401 aaPredicted RBP7.44□□□□□ -1.22
RNU6-840P-201ENST00000517275 CACNB1Q02641 598 aaPredicted RBP7.44□□□□□ -1.22
RNU6-840P-201ENST00000517275 TSHZ2Q9NRE2 1034 aa7.44□□□□□ -1.22
RNU6-840P-201ENST00000517275 SGIP1Q9BQI5 828 aa7.43□□□□□ -1.22
RNU6-840P-201ENST00000517275 RIOK3O14730 519 aaKnown RBP7.42□□□□□ -1.22
RNU6-840P-201ENST00000517275 CHRM1P11229 460 aaPredicted RBP7.42□□□□□ -1.22
RNU6-840P-201ENST00000517275 FAM212AQ96EL1 285 aa7.4□□□□□ -1.22
RNU6-840P-201ENST00000517275 CREBZFQ9NS37 354 aa7.4□□□□□ -1.22
RNU6-840P-201ENST00000517275 VGFO15240 615 aaPredicted RBP7.39□□□□□ -1.23
RNU6-840P-201ENST00000517275 PRKCSHP14314 528 aaPredicted RBP7.37□□□□□ -1.23
RNU6-840P-201ENST00000517275 NKX1-1Q15270 411 aaPredicted RBP7.37□□□□□ -1.23
RNU6-840P-201ENST00000517275 GTPBP6O43824 516 aaPredicted RBP7.35□□□□□ -1.23
RNU6-840P-201ENST00000517275 PRR29P0C7W0 189 aa7.34□□□□□ -1.23
RNU6-840P-201ENST00000517275 TPRNQ4KMQ1 711 aa7.34□□□□□ -1.23
RNU6-840P-201ENST00000517275 RYDENQ9NUL5 291 aaKnown RBP7.34□□□□□ -1.23
RNU6-840P-201ENST00000517275 DCAF8Q5TAQ9 597 aa7.33□□□□□ -1.24
RNU6-840P-201ENST00000517275 REM2Q8IYK8 340 aaPredicted RBP7.33□□□□□ -1.24
RNU6-840P-201ENST00000517275 RASEFQ8IZ41 740 aa7.31□□□□□ -1.24
RNU6-840P-201ENST00000517275 STK25O00506 426 aa7.3□□□□□ -1.24
RNU6-840P-201ENST00000517275 NBR1Q14596 966 aa7.3□□□□□ -1.24
RNU6-840P-201ENST00000517275 CLEC11AQ9Y240 323 aa7.28□□□□□ -1.24
RNU6-840P-201ENST00000517275 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.26□□□□□ -1.25
RNU6-840P-201ENST00000517275 ZFP91Q96JP5 570 aaPredicted RBP7.26□□□□□ -1.25
RNU6-840P-201ENST00000517275 PITPNM1O00562 1244 aa7.25□□□□□ -1.25
RNU6-840P-201ENST00000517275 BCL11BQ9C0K0 894 aaPredicted RBP7.25□□□□□ -1.25
RNU6-840P-201ENST00000517275 ZNF467Q7Z7K2 595 aaPredicted RBP7.22□□□□□ -1.25
RNU6-840P-201ENST00000517275 STK24Q9Y6E0 443 aa7.22□□□□□ -1.25
RNU6-840P-201ENST00000517275 P3H3Q8IVL6 736 aa7.21□□□□□ -1.26
RNU6-840P-201ENST00000517275 PYGBP11216 843 aa7.2□□□□□ -1.26
RNU6-840P-201ENST00000517275 PDAP1Q13442 181 aaKnown RBP7.17□□□□□ -1.26
RNU6-840P-201ENST00000517275 ZNF579Q8NAF0 562 aaKnown RBP7.15□□□□□ -1.26
RNU6-840P-201ENST00000517275 FARP1Q9Y4F1 1045 aaPredicted RBP7.14□□□□□ -1.27
RNU6-840P-201ENST00000517275 CCDC61Q9Y6R9 512 aa7.14□□□□□ -1.27
RNU6-840P-201ENST00000517275 MFRPQ9BY79 579 aa7.1□□□□□ -1.27
RNU6-840P-201ENST00000517275 KCNV2Q8TDN2 545 aa7.09□□□□□ -1.27
RNU6-840P-201ENST00000517275 PSEN1P49768 467 aa7.08□□□□□ -1.28
RNU6-840P-201ENST00000517275 FXR2P51116 673 aaKnown RBP eCLIP7.08□□□□□ -1.28
RNU6-840P-201ENST00000517275 CHADLQ6NUI6 762 aa7.08□□□□□ -1.28
RNU6-840P-201ENST00000517275 CADPS2Q86UW7 1296 aa7.08□□□□□ -1.28
RNU6-840P-201ENST00000517275 TSPYL2Q9H2G4 693 aaPredicted RBP7.08□□□□□ -1.28
RNU6-840P-201ENST00000517275 FBXO22Q8NEZ5 403 aa7.06□□□□□ -1.28
RNU6-840P-201ENST00000517275 PCDHB8Q9UN66 801 aa7.05□□□□□ -1.28
RNU6-840P-201ENST00000517275 PCDHB13Q9Y5F0 798 aa7.05□□□□□ -1.28
RNU6-840P-201ENST00000517275 SOX12O15370 315 aa7.04□□□□□ -1.28
RNU6-840P-201ENST00000517275 PRKAR2AP13861 404 aaKnown RBP7.04□□□□□ -1.28
RNU6-840P-201ENST00000517275 WDR70Q9NW82 654 aa7.04□□□□□ -1.28
RNU6-840P-201ENST00000517275 ARHGEF1Q92888 912 aaKnown RBP7.03□□□□□ -1.28
RNU6-840P-201ENST00000517275 PAK3O75914 559 aaPredicted RBP7.02□□□□□ -1.29
RNU6-840P-201ENST00000517275 NLRP6P59044 892 aa7.02□□□□□ -1.29
RNU6-840P-201ENST00000517275 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.02□□□□□ -1.29
RNU6-840P-201ENST00000517275 IFNL1Q8IU54 200 aa7.02□□□□□ -1.29
RNU6-840P-201ENST00000517275 KIF12Q96FN5 646 aa7.02□□□□□ -1.29
RNU6-840P-201ENST00000517275 LMOD2Q6P5Q4 547 aa7.01□□□□□ -1.29
RNU6-840P-201ENST00000517275 TMEM132AQ24JP5 1023 aa7□□□□□ -1.29
RNU6-840P-201ENST00000517275 ARIH1Q9Y4X5 557 aaPredicted RBP7□□□□□ -1.29
RNU6-840P-201ENST00000517275 ERICH6Q7L0X2 663 aa6.99□□□□□ -1.29
RNU6-840P-201ENST00000517275 MFSD10Q14728 455 aa6.98□□□□□ -1.29
RNU6-840P-201ENST00000517275 EFCAB3Q8N7B9 438 aa6.98□□□□□ -1.29
RNU6-840P-201ENST00000517275 TULP1O00294 542 aaPredicted RBP6.97□□□□□ -1.29
RNU6-840P-201ENST00000517275 MAP3K13O43283 966 aa6.97□□□□□ -1.29
RNU6-840P-201ENST00000517275 PPP1R37O75864 691 aa6.97□□□□□ -1.29
RNU6-840P-201ENST00000517275 E2F4Q16254 413 aa6.97□□□□□ -1.29
RNU6-840P-201ENST00000517275 TESPA1A2RU30 521 aaPredicted RBP6.96□□□□□ -1.3
RNU6-840P-201ENST00000517275 CRISPLD2Q9H0B8 497 aa6.95□□□□□ -1.3
RNU6-840P-201ENST00000517275 CABP2Q9NPB3 220 aa6.95□□□□□ -1.3
RNU6-840P-201ENST00000517275 PHF8Q9UPP1 1060 aa6.95□□□□□ -1.3
RNU6-840P-201ENST00000517275 PIP4P2Q8N4L2 257 aa6.94□□□□□ -1.3
RNU6-840P-201ENST00000517275 NCKAP5LQ9HCH0 1330 aa6.94□□□□□ -1.3
RNU6-840P-201ENST00000517275 CAMK2BQ13554 666 aa6.93□□□□□ -1.3
RNU6-840P-201ENST00000517275 CHRDL2Q6WN34 429 aa6.93□□□□□ -1.3
RNU6-840P-201ENST00000517275 MS4A4AQ96JQ5 239 aa6.93□□□□□ -1.3
RNU6-840P-201ENST00000517275 ILDR1Q86SU0 546 aaPredicted RBP6.92□□□□□ -1.3
RNU6-840P-201ENST00000517275 GTF3C3Q9Y5Q9 886 aa6.92□□□□□ -1.3
RNU6-840P-201ENST00000517275 TIMELESSQ9UNS1 1208 aa6.91□□□□□ -1.3
RNU6-840P-201ENST00000517275 PDE4AP27815 886 aa6.9□□□□□ -1.3
RNU6-840P-201ENST00000517275 ZC3H15Q8WU90 426 aaKnown RBP6.9□□□□□ -1.3
RNU6-840P-201ENST00000517275 BRPF1P55201 1214 aaPredicted RBP6.88□□□□□ -1.31
RNU6-840P-201ENST00000517275 SEMA3EO15041 775 aa6.87□□□□□ -1.31
RNU6-840P-201ENST00000517275 CD44P16070 742 aaKnown RBP6.87□□□□□ -1.31
RNU6-840P-201ENST00000517275 DDX27Q96GQ7 796 aaKnown RBP6.87□□□□□ -1.31
RNU6-840P-201ENST00000517275 ZRANB1Q9UGI0 708 aa6.87□□□□□ -1.31
RNU6-840P-201ENST00000517275 SMYD5Q6GMV2 418 aa6.86□□□□□ -1.31
RNU6-840P-201ENST00000517275 ZMYND10O75800 440 aa6.85□□□□□ -1.31
RNU6-840P-201ENST00000517275 TIE1P35590 1138 aa6.85□□□□□ -1.31
RNU6-840P-201ENST00000517275 LARP6Q9BRS8 491 aaKnown RBP6.85□□□□□ -1.31
RNU6-840P-201ENST00000517275 PHF12Q96QT6 1004 aa6.84□□□□□ -1.31
RNU6-840P-201ENST00000517275 TMEM106CQ9BVX2 250 aa6.84□□□□□ -1.31
RNU6-840P-201ENST00000517275 GOLGA2Q08379 1002 aa6.82□□□□□ -1.32
RNU6-840P-201ENST00000517275 MS4A3Q96HJ5 214 aa6.82□□□□□ -1.32
RNU6-840P-201ENST00000517275 C19orf67A6NJJ6 358 aa6.81□□□□□ -1.32
RNU6-840P-201ENST00000517275 GPHNQ9NQX3 736 aaPredicted RBP6.81□□□□□ -1.32
RNU6-840P-201ENST00000517275 MKRN3Q13064 507 aaKnown RBP6.8□□□□□ -1.32
RNU6-840P-201ENST00000517275 BARGINQ6ZT62 677 aa6.8□□□□□ -1.32
RNU6-840P-201ENST00000517275 PDIA6Q15084 440 aa6.79□□□□□ -1.32
RNU6-840P-201ENST00000517275 PPP1R15BQ5SWA1 713 aa6.79□□□□□ -1.32
RNU6-840P-201ENST00000517275 TRPC6Q9Y210 931 aa6.79□□□□□ -1.32
RNU6-840P-201ENST00000517275 TTLL13PA6NNM8 815 aa6.78□□□□□ -1.32
RNU6-840P-201ENST00000517275 CLCN6P51797 869 aa6.78□□□□□ -1.32
RNU6-840P-201ENST00000517275 SLC24A3Q9HC58 644 aa6.78□□□□□ -1.32
RNU6-840P-201ENST00000517275 SPDYE16A6NNV3 312 aaPredicted RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms