RNA–Protein interactions for RNA: ENST00000516600.1

SCARNA21.2-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21.2-201ENST00000516600 SHROOM2Q13796 1616 aa11.23□□□□□ -0.61
SCARNA21.2-201ENST00000516600 PBRM1Q86U86 1689 aa11.23□□□□□ -0.61
SCARNA21.2-201ENST00000516600 GRIN2AQ12879 1464 aa11.2□□□□□ -0.62
SCARNA21.2-201ENST00000516600 FGD5Q6ZNL6 1462 aa11.2□□□□□ -0.62
SCARNA21.2-201ENST00000516600 NUP160Q12769 1436 aa11.18□□□□□ -0.62
SCARNA21.2-201ENST00000516600 CERKQ8TCT0 537 aa11.18□□□□□ -0.62
SCARNA21.2-201ENST00000516600 PRG4Q92954 1404 aaPredicted RBP11.18□□□□□ -0.62
SCARNA21.2-201ENST00000516600 CCDC88BA6NC98 1476 aa11.17□□□□□ -0.62
SCARNA21.2-201ENST00000516600 ADCY10Q96PN6 1610 aa11.15□□□□□ -0.62
SCARNA21.2-201ENST00000516600 PPRC1Q5VV67 1664 aaKnown RBP11.12□□□□□ -0.63
SCARNA21.2-201ENST00000516600 COL17A1Q9UMD9 1497 aaPredicted RBP11.12□□□□□ -0.63
SCARNA21.2-201ENST00000516600 PCF11O94913 1555 aaKnown RBP11.09□□□□□ -0.63
SCARNA21.2-201ENST00000516600 ABCA5Q8WWZ7 1642 aa11.08□□□□□ -0.64
SCARNA21.2-201ENST00000516600 ADAMTS12P58397 1594 aa11.07□□□□□ -0.64
SCARNA21.2-201ENST00000516600 JPH4Q96JJ6 628 aa11.07□□□□□ -0.64
SCARNA21.2-201ENST00000516600 GLI2P10070 1586 aa11.05□□□□□ -0.64
SCARNA21.2-201ENST00000516600 PTPRMP28827 1452 aa11.04□□□□□ -0.64
SCARNA21.2-201ENST00000516600 TEX14Q8IWB6 1497 aa11.04□□□□□ -0.64
SCARNA21.2-201ENST00000516600 CUX1P39880 1505 aa11.03□□□□□ -0.64
SCARNA21.2-201ENST00000516600 ABCA10Q8WWZ4 1543 aa11.01□□□□□ -0.65
SCARNA21.2-201ENST00000516600 FHAD1B1AJZ9 1412 aa11.01□□□□□ -0.65
SCARNA21.2-201ENST00000516600 PLB1Q6P1J6 1458 aa11□□□□□ -0.65
SCARNA21.2-201ENST00000516600 KIF21BO75037 1637 aa11□□□□□ -0.65
SCARNA21.2-201ENST00000516600 ASXL2Q76L83 1435 aa11□□□□□ -0.65
SCARNA21.2-201ENST00000516600 HSPA2P54652 639 aa10.97□□□□□ -0.65
SCARNA21.2-201ENST00000516600 MAP3K4Q9Y6R4 1608 aa10.96□□□□□ -0.65
SCARNA21.2-201ENST00000516600 RUSC2Q8N2Y8 1516 aa10.94□□□□□ -0.66
SCARNA21.2-201ENST00000516600 ADAMTSL3P82987 1691 aa10.94□□□□□ -0.66
SCARNA21.2-201ENST00000516600 ABCC2Q92887 1545 aa10.94□□□□□ -0.66
SCARNA21.2-201ENST00000516600 KIAA0586Q9BVV6 1533 aa10.92□□□□□ -0.66
SCARNA21.2-201ENST00000516600 EPRSP07814 1512 aaKnown RBP10.91□□□□□ -0.66
SCARNA21.2-201ENST00000516600 TTBK1Q5TCY1 1321 aaPredicted RBP10.88□□□□□ -0.67
SCARNA21.2-201ENST00000516600 PTPRGP23470 1445 aa10.88□□□□□ -0.67
SCARNA21.2-201ENST00000516600 CUL7Q14999 1698 aa10.88□□□□□ -0.67
SCARNA21.2-201ENST00000516600 MADDQ8WXG6 1647 aa10.87□□□□□ -0.67
SCARNA21.2-201ENST00000516600 ERICH3Q5RHP9 1530 aa10.86□□□□□ -0.67
SCARNA21.2-201ENST00000516600 ARID4BQ4LE39 1312 aaPredicted RBP10.83□□□□□ -0.68
SCARNA21.2-201ENST00000516600 BCORL1Q5H9F3 1711 aa10.82□□□□□ -0.68
SCARNA21.2-201ENST00000516600 PLPPR3Q6T4P5 718 aa10.82□□□□□ -0.68
SCARNA21.2-201ENST00000516600 WRNQ14191 1432 aaPredicted RBP eCLIP10.82□□□□□ -0.68
SCARNA21.2-201ENST00000516600 DMRT2Q9Y5R5 561 aa10.81□□□□□ -0.68
SCARNA21.2-201ENST00000516600 RIMS1Q86UR5 1692 aaKnown RBP10.81□□□□□ -0.68
SCARNA21.2-201ENST00000516600 UHRF1BP1LA0JNW5 1464 aa10.8□□□□□ -0.68
SCARNA21.2-201ENST00000516600 MAGI3Q5TCQ9 1506 aa10.79□□□□□ -0.68
SCARNA21.2-201ENST00000516600 MED1Q15648 1581 aaPredicted RBP10.78□□□□□ -0.68
SCARNA21.2-201ENST00000516600 TNIKQ9UKE5 1360 aa10.77□□□□□ -0.68
SCARNA21.2-201ENST00000516600 CD109Q6YHK3 1445 aa10.77□□□□□ -0.68
SCARNA21.2-201ENST00000516600 IQSEC2Q5JU85 1478 aa10.77□□□□□ -0.69
SCARNA21.2-201ENST00000516600 YEATS2Q9ULM3 1422 aa10.76□□□□□ -0.69
SCARNA21.2-201ENST00000516600 PHF23Q9BUL5 403 aaPredicted RBP10.76□□□□□ -0.69
SCARNA21.2-201ENST00000516600 UACAQ9BZF9 1416 aa10.75□□□□□ -0.69
SCARNA21.2-201ENST00000516600 KDM5BQ9UGL1 1544 aa10.75□□□□□ -0.69
SCARNA21.2-201ENST00000516600 WDR7Q9Y4E6 1490 aa10.74□□□□□ -0.69
SCARNA21.2-201ENST00000516600 CFAP43Q8NDM7 1665 aa10.74□□□□□ -0.69
SCARNA21.2-201ENST00000516600 CARMIL2Q6F5E8 1435 aa10.74□□□□□ -0.69
SCARNA21.2-201ENST00000516600 ZCCHC11Q5TAX3 1644 aaKnown RBP10.73□□□□□ -0.69
SCARNA21.2-201ENST00000516600 ARAP3Q8WWN8 1544 aa10.73□□□□□ -0.69
SCARNA21.2-201ENST00000516600 UBAP1LF5GYI3 381 aa10.71□□□□□ -0.69
SCARNA21.2-201ENST00000516600 STRCQ7RTU9 1775 aa10.7□□□□□ -0.7
SCARNA21.2-201ENST00000516600 LTBP4Q8N2S1 1624 aa10.69□□□□□ -0.7
SCARNA21.2-201ENST00000516600 PREX1Q8TCU6 1659 aa10.67□□□□□ -0.7
SCARNA21.2-201ENST00000516600 KCNH8Q96L42 1107 aa10.67□□□□□ -0.7
SCARNA21.2-201ENST00000516600 PTPRTO14522 1441 aa10.67□□□□□ -0.7
SCARNA21.2-201ENST00000516600 POGZQ7Z3K3 1410 aa10.66□□□□□ -0.7
SCARNA21.2-201ENST00000516600 RAPGEF3O95398 923 aa10.65□□□□□ -0.7
SCARNA21.2-201ENST00000516600 PHLDB1Q86UU1 1377 aa10.63□□□□□ -0.71
SCARNA21.2-201ENST00000516600 HSPA1LP34931 641 aa10.62□□□□□ -0.71
SCARNA21.2-201ENST00000516600 FANCAO15360 1455 aa10.61□□□□□ -0.71
SCARNA21.2-201ENST00000516600 TTC37Q6PGP7 1564 aa10.61□□□□□ -0.71
SCARNA21.2-201ENST00000516600 ARHGEF40Q8TER5 1519 aa10.61□□□□□ -0.71
SCARNA21.2-201ENST00000516600 BIVM-ERCC5R4GMW8 1640 aa10.61□□□□□ -0.71
SCARNA21.2-201ENST00000516600 SCAF1Q9H7N4 1312 aaKnown RBP10.6□□□□□ -0.71
SCARNA21.2-201ENST00000516600 UHRF1BP1Q6BDS2 1440 aa10.6□□□□□ -0.71
SCARNA21.2-201ENST00000516600 FER1L4A9Z1Z3 1794 aa10.6□□□□□ -0.71
SCARNA21.2-201ENST00000516600 MLECQ14165 292 aa10.58□□□□□ -0.72
SCARNA21.2-201ENST00000516600 FRMPD1Q5SYB0 1578 aa10.57□□□□□ -0.72
SCARNA21.2-201ENST00000516600 IQGAP2Q13576 1575 aa10.56□□□□□ -0.72
SCARNA21.2-201ENST00000516600 DISP1Q96F81 1524 aa10.55□□□□□ -0.72
SCARNA21.2-201ENST00000516600 PIP4K2BP78356 416 aa10.55□□□□□ -0.72
SCARNA21.2-201ENST00000516600 AKNAQ7Z591 1439 aa10.54□□□□□ -0.72
SCARNA21.2-201ENST00000516600 NEO1Q92859 1461 aa10.54□□□□□ -0.72
SCARNA21.2-201ENST00000516600 CEBPAP49715 358 aaPredicted RBP10.53□□□□□ -0.72
SCARNA21.2-201ENST00000516600 ZNF335Q9H4Z2 1342 aaPredicted RBP10.52□□□□□ -0.73
SCARNA21.2-201ENST00000516600 SETD1BQ9UPS6 1966 aaKnown RBP10.5□□□□□ -0.73
SCARNA21.2-201ENST00000516600 SIGLEC1Q9BZZ2 1709 aa10.49□□□□□ -0.73
SCARNA21.2-201ENST00000516600 NCOA1Q15788 1441 aa10.49□□□□□ -0.73
SCARNA21.2-201ENST00000516600 TOM1O60784 492 aa10.48□□□□□ -0.73
SCARNA21.2-201ENST00000516600 IGF1RP08069 1367 aa10.48□□□□□ -0.73
SCARNA21.2-201ENST00000516600 ARHGEF12Q9NZN5 1544 aa10.48□□□□□ -0.73
SCARNA21.2-201ENST00000516600 ABCA9Q8IUA7 1624 aa10.47□□□□□ -0.73
SCARNA21.2-201ENST00000516600 DENND4BO75064 1496 aaPredicted RBP10.47□□□□□ -0.73
SCARNA21.2-201ENST00000516600 ZFYVE16Q7Z3T8 1539 aa10.47□□□□□ -0.73
SCARNA21.2-201ENST00000516600 KIAA0556O60303 1618 aa10.47□□□□□ -0.73
SCARNA21.2-201ENST00000516600 RGS17Q9UGC6 210 aaPredicted RBP10.46□□□□□ -0.73
SCARNA21.2-201ENST00000516600 EFCAB5A4FU69 1503 aa10.46□□□□□ -0.74
SCARNA21.2-201ENST00000516600 RICTORQ6R327 1708 aa10.45□□□□□ -0.74
SCARNA21.2-201ENST00000516600 UGGT2Q9NYU1 1516 aa10.44□□□□□ -0.74
SCARNA21.2-201ENST00000516600 SRCAPQ6ZRS2 3230 aa10.44□□□□□ -0.74
SCARNA21.2-201ENST00000516600 FHOD3Q2V2M9 1422 aa10.43□□□□□ -0.74
SCARNA21.2-201ENST00000516600 ZMYM4Q5VZL5 1548 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms