RNA–Protein interactions for RNA: ENST00000516600.1

SCARNA21.2-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21.2-201ENST00000516600 NISCHQ9Y2I1 1504 aa15.17■□□□□ 0.02
SCARNA21.2-201ENST00000516600 ABCC9O60706 1549 aa14.93□□□□□ -0.02
SCARNA21.2-201ENST00000516600 DNAJC5BQ9UF47 199 aa14.77□□□□□ -0.05
SCARNA21.2-201ENST00000516600 DNAJC5Q9H3Z4 198 aa14.27□□□□□ -0.13
SCARNA21.2-201ENST00000516600 CCDC180Q9P1Z9 1646 aa14.03□□□□□ -0.16
SCARNA21.2-201ENST00000516600 RB1CC1Q8TDY2 1594 aa13.81□□□□□ -0.2
SCARNA21.2-201ENST00000516600 PABPN1Q86U42 306 aaKnown RBP eCLIP13.76□□□□□ -0.21
SCARNA21.2-201ENST00000516600 CECR2Q9BXF3 1484 aa13.55□□□□□ -0.24
SCARNA21.2-201ENST00000516600 NACADO15069 1562 aa13.48□□□□□ -0.25
SCARNA21.2-201ENST00000516600 UNC13AQ9UPW8 1703 aa13.44□□□□□ -0.26
SCARNA21.2-201ENST00000516600 CC2D2AQ9P2K1 1620 aa13.42□□□□□ -0.26
SCARNA21.2-201ENST00000516600 BICRAQ9NZM4 1560 aa13.4□□□□□ -0.26
SCARNA21.2-201ENST00000516600 TRIM41Q8WV44 630 aa13.31□□□□□ -0.28
SCARNA21.2-201ENST00000516600 DCAF8L2P0C7V8 631 aa13.26□□□□□ -0.29
SCARNA21.2-201ENST00000516600 CUX2O14529 1486 aa13.25□□□□□ -0.29
SCARNA21.2-201ENST00000516600 SHROOM4Q9ULL8 1493 aa13.17□□□□□ -0.3
SCARNA21.2-201ENST00000516600 EIF4G1Q04637 1599 aaKnown RBP13.17□□□□□ -0.3
SCARNA21.2-201ENST00000516600 ERCC6Q03468 1493 aa13□□□□□ -0.33
SCARNA21.2-201ENST00000516600 MYO15BQ96JP2 1530 aa12.97□□□□□ -0.33
SCARNA21.2-201ENST00000516600 AEBP2Q6ZN18 517 aaPredicted RBP12.81□□□□□ -0.36
SCARNA21.2-201ENST00000516600 SCRIBQ14160 1630 aa12.76□□□□□ -0.37
SCARNA21.2-201ENST00000516600 THOC2Q8NI27 1593 aaKnown RBP12.6□□□□□ -0.39
SCARNA21.2-201ENST00000516600 NESP48681 1621 aa12.55□□□□□ -0.4
SCARNA21.2-201ENST00000516600 OSCARQ8IYS5 282 aa12.5□□□□□ -0.41
SCARNA21.2-201ENST00000516600 SMARCA2P51531 1590 aa12.48□□□□□ -0.41
SCARNA21.2-201ENST00000516600 BAZ1AQ9NRL2 1556 aaPredicted RBP12.48□□□□□ -0.41
SCARNA21.2-201ENST00000516600 TRHP20396 242 aaPredicted RBP12.47□□□□□ -0.41
SCARNA21.2-201ENST00000516600 DCAF1Q9Y4B6 1507 aa12.47□□□□□ -0.41
SCARNA21.2-201ENST00000516600 NCAPD3P42695 1498 aa12.44□□□□□ -0.42
SCARNA21.2-201ENST00000516600 RIMBP3CA6NJZ7 1639 aa12.42□□□□□ -0.42
SCARNA21.2-201ENST00000516600 RIMBP3BA6NNM3 1639 aa12.42□□□□□ -0.42
SCARNA21.2-201ENST00000516600 RIMBP3Q9UFD9 1639 aa12.42□□□□□ -0.42
SCARNA21.2-201ENST00000516600 ILDR1Q86SU0 546 aaPredicted RBP12.39□□□□□ -0.43
SCARNA21.2-201ENST00000516600 ZCCHC6Q5VYS8 1495 aaKnown RBP12.38□□□□□ -0.43
SCARNA21.2-201ENST00000516600 KIF21AQ7Z4S6 1674 aa12.35□□□□□ -0.43
SCARNA21.2-201ENST00000516600 LAMC3Q9Y6N6 1575 aa12.32□□□□□ -0.44
SCARNA21.2-201ENST00000516600 PDS5BQ9NTI5 1447 aa12.3□□□□□ -0.44
SCARNA21.2-201ENST00000516600 ARHGEF11O15085 1522 aa12.29□□□□□ -0.44
SCARNA21.2-201ENST00000516600 HMGXB3Q12766 1538 aa12.28□□□□□ -0.44
SCARNA21.2-201ENST00000516600 ATAD2BQ9ULI0 1458 aa12.27□□□□□ -0.44
SCARNA21.2-201ENST00000516600 CYB5RLQ6IPT4 315 aa12.27□□□□□ -0.45
SCARNA21.2-201ENST00000516600 MRC2Q9UBG0 1479 aa12.25□□□□□ -0.45
SCARNA21.2-201ENST00000516600 WDR62O43379 1518 aa12.23□□□□□ -0.45
SCARNA21.2-201ENST00000516600 BAZ1BQ9UIG0 1483 aaKnown RBP12.14□□□□□ -0.47
SCARNA21.2-201ENST00000516600 ARAP1Q96P48 1450 aa12.1□□□□□ -0.47
SCARNA21.2-201ENST00000516600 SMARCA4P51532 1647 aa12.04□□□□□ -0.48
SCARNA21.2-201ENST00000516600 CADPSQ9ULU8 1353 aa12.03□□□□□ -0.48
SCARNA21.2-201ENST00000516600 CEP164Q9UPV0 1460 aa12.02□□□□□ -0.48
SCARNA21.2-201ENST00000516600 RSF1Q96T23 1441 aaPredicted RBP11.94□□□□□ -0.5
SCARNA21.2-201ENST00000516600 FANCD2Q9BXW9 1451 aa11.91□□□□□ -0.5
SCARNA21.2-201ENST00000516600 PEG3Q9GZU2 1588 aa11.91□□□□□ -0.5
SCARNA21.2-201ENST00000516600 URB2Q14146 1524 aaKnown RBP11.86□□□□□ -0.51
SCARNA21.2-201ENST00000516600 ZNF608Q9ULD9 1512 aaPredicted RBP11.86□□□□□ -0.51
SCARNA21.2-201ENST00000516600 CHD1O14646 1710 aa11.84□□□□□ -0.51
SCARNA21.2-201ENST00000516600 IFT140Q96RY7 1462 aa11.81□□□□□ -0.52
SCARNA21.2-201ENST00000516600 FBLN2P98095 1184 aa11.8□□□□□ -0.52
SCARNA21.2-201ENST00000516600 KDM4FA0A1W2PPD8 638 aa11.78□□□□□ -0.52
SCARNA21.2-201ENST00000516600 EIF4G3O43432 1585 aaKnown RBP11.76□□□□□ -0.53
SCARNA21.2-201ENST00000516600 LMTK3Q96Q04 1460 aa11.76□□□□□ -0.53
SCARNA21.2-201ENST00000516600 FBXO41Q8TF61 875 aa11.75□□□□□ -0.53
SCARNA21.2-201ENST00000516600 ERCC6L2Q5T890 1561 aa11.74□□□□□ -0.53
SCARNA21.2-201ENST00000516600 CFTRP13569 1480 aa11.7□□□□□ -0.54
SCARNA21.2-201ENST00000516600 SOCS7O14512 581 aa11.68□□□□□ -0.54
SCARNA21.2-201ENST00000516600 MROH2BQ7Z745 1585 aa11.67□□□□□ -0.54
SCARNA21.2-201ENST00000516600 CLASP1Q7Z460 1538 aa11.67□□□□□ -0.54
SCARNA21.2-201ENST00000516600 GAPVD1Q14C86 1478 aa11.65□□□□□ -0.54
SCARNA21.2-201ENST00000516600 HECW2Q9P2P5 1572 aa11.65□□□□□ -0.54
SCARNA21.2-201ENST00000516600 AQRO60306 1485 aaKnown RBP eCLIP11.64□□□□□ -0.55
SCARNA21.2-201ENST00000516600 SYNJ1O43426 1573 aa11.62□□□□□ -0.55
SCARNA21.2-201ENST00000516600 KIF13AQ9H1H9 1805 aa11.6□□□□□ -0.55
SCARNA21.2-201ENST00000516600 TOPBP1Q92547 1522 aa11.57□□□□□ -0.56
SCARNA21.2-201ENST00000516600 ILDR2Q71H61 639 aa11.55□□□□□ -0.56
SCARNA21.2-201ENST00000516600 CHMP7Q8WUX9 453 aaPredicted RBP11.55□□□□□ -0.56
SCARNA21.2-201ENST00000516600 KDM6BO15054 1643 aa11.54□□□□□ -0.56
SCARNA21.2-201ENST00000516600 TARBP1Q13395 1621 aaKnown RBP11.52□□□□□ -0.57
SCARNA21.2-201ENST00000516600 SYNJ2O15056 1496 aa11.51□□□□□ -0.57
SCARNA21.2-201ENST00000516600 ADGRL1O94910 1474 aa11.51□□□□□ -0.57
SCARNA21.2-201ENST00000516600 SNAPC4Q5SXM2 1469 aa11.51□□□□□ -0.57
SCARNA21.2-201ENST00000516600 PRDM2Q13029 1718 aa11.5□□□□□ -0.57
SCARNA21.2-201ENST00000516600 DISP3Q9P2K9 1392 aa11.5□□□□□ -0.57
SCARNA21.2-201ENST00000516600 ABCC8Q09428 1581 aa11.5□□□□□ -0.57
SCARNA21.2-201ENST00000516600 WIZO95785 1651 aa11.49□□□□□ -0.57
SCARNA21.2-201ENST00000516600 FAM69CQ0P6D2 419 aa11.48□□□□□ -0.57
SCARNA21.2-201ENST00000516600 DNMBPQ6XZF7 1577 aa11.45□□□□□ -0.58
SCARNA21.2-201ENST00000516600 MAGI1Q96QZ7 1491 aaPredicted RBP11.44□□□□□ -0.58
SCARNA21.2-201ENST00000516600 TDRD9Q8NDG6 1382 aaKnown RBP11.43□□□□□ -0.58
SCARNA21.2-201ENST00000516600 ABCC10Q5T3U5 1492 aa11.43□□□□□ -0.58
SCARNA21.2-201ENST00000516600 POLA1P09884 1462 aaPredicted RBP11.4□□□□□ -0.58
SCARNA21.2-201ENST00000516600 RAD54L2Q9Y4B4 1467 aa11.37□□□□□ -0.59
SCARNA21.2-201ENST00000516600 DIP2BQ9P265 1576 aa11.37□□□□□ -0.59
SCARNA21.2-201ENST00000516600 WDR97A6NE52 1622 aa11.36□□□□□ -0.59
SCARNA21.2-201ENST00000516600 GRIN2BQ13224 1484 aa11.35□□□□□ -0.59
SCARNA21.2-201ENST00000516600 TSPOAP1O95153 1857 aa11.34□□□□□ -0.59
SCARNA21.2-201ENST00000516600 SOGA1O94964 1423 aa11.34□□□□□ -0.59
SCARNA21.2-201ENST00000516600 CEP170Q5SW79 1584 aa11.33□□□□□ -0.6
SCARNA21.2-201ENST00000516600 MAPKBP1O60336 1514 aa11.32□□□□□ -0.6
SCARNA21.2-201ENST00000516600 NPM1P06748 294 aaKnown RBP eCLIP11.32□□□□□ -0.6
SCARNA21.2-201ENST00000516600 TOP2AP11388 1531 aaKnown RBP11.3□□□□□ -0.6
SCARNA21.2-201ENST00000516600 SPATA31D1Q6ZQQ2 1576 aa11.29□□□□□ -0.6
SCARNA21.2-201ENST00000516600 TOP2BQ02880 1626 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms