RNA–Protein interactions for RNA: ENST00000515170.5

RAPGEF6-214, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

TSL 2

Gene RAPGEF6, Length 4,103 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-214ENST00000515170 BICRAQ9NZM4 1560 aa13.98□□□□□ -0.17
RAPGEF6-214ENST00000515170 NESP48681 1621 aa13.98□□□□□ -0.17
RAPGEF6-214ENST00000515170 CFDP1Q9UEE9 299 aaPredicted RBP13.98□□□□□ -0.17
RAPGEF6-214ENST00000515170 TONSLQ96HA7 1378 aa13.96□□□□□ -0.17
RAPGEF6-214ENST00000515170 KDM2AQ9Y2K7 1162 aa13.96□□□□□ -0.18
RAPGEF6-214ENST00000515170 RAD54L2Q9Y4B4 1467 aa13.95□□□□□ -0.18
RAPGEF6-214ENST00000515170 BCANQ96GW7 911 aa13.95□□□□□ -0.18
RAPGEF6-214ENST00000515170 DDX10Q13206 875 aaKnown RBP13.91□□□□□ -0.18
RAPGEF6-214ENST00000515170 VPS8Q8N3P4 1428 aa13.91□□□□□ -0.18
RAPGEF6-214ENST00000515170 FHOD3Q2V2M9 1422 aa13.91□□□□□ -0.18
RAPGEF6-214ENST00000515170 SIN3AQ96ST3 1273 aa13.89□□□□□ -0.19
RAPGEF6-214ENST00000515170 CC2D2AQ9P2K1 1620 aa13.89□□□□□ -0.19
RAPGEF6-214ENST00000515170 FGD5Q6ZNL6 1462 aa13.89□□□□□ -0.19
RAPGEF6-214ENST00000515170 ANP32CO43423 234 aa13.88□□□□□ -0.19
RAPGEF6-214ENST00000515170 RGL3Q3MIN7 710 aa13.86□□□□□ -0.19
RAPGEF6-214ENST00000515170 ESF1Q9H501 851 aaKnown RBP13.86□□□□□ -0.19
RAPGEF6-214ENST00000515170 IGF1RP08069 1367 aa13.85□□□□□ -0.19
RAPGEF6-214ENST00000515170 FHAD1B1AJZ9 1412 aa13.85□□□□□ -0.19
RAPGEF6-214ENST00000515170 CCNB3Q8WWL7 1395 aa13.84□□□□□ -0.19
RAPGEF6-214ENST00000515170 JPH4Q96JJ6 628 aa13.83□□□□□ -0.2
RAPGEF6-214ENST00000515170 STAG3Q9UJ98 1225 aa13.83□□□□□ -0.2
RAPGEF6-214ENST00000515170 AQRO60306 1485 aaKnown RBP eCLIP13.83□□□□□ -0.22e-6■■■□□ 18.6
RAPGEF6-214ENST00000515170 CFTRP13569 1480 aa13.8□□□□□ -0.2
RAPGEF6-214ENST00000515170 SYNJ1O43426 1573 aa13.79□□□□□ -0.2
RAPGEF6-214ENST00000515170 MYT1Q01538 1121 aa13.79□□□□□ -0.2
RAPGEF6-214ENST00000515170 FOXD1Q16676 465 aa13.79□□□□□ -0.2
RAPGEF6-214ENST00000515170 UNC13AQ9UPW8 1703 aa13.76□□□□□ -0.21
RAPGEF6-214ENST00000515170 GAPVD1Q14C86 1478 aa13.75□□□□□ -0.21
RAPGEF6-214ENST00000515170 GTF3C3Q9Y5Q9 886 aa13.74□□□□□ -0.21
RAPGEF6-214ENST00000515170 MIER1Q8N108 512 aa13.73□□□□□ -0.21
RAPGEF6-214ENST00000515170 SENP3-EIF4A1A0A087X0R7 540 aa13.73□□□□□ -0.21
RAPGEF6-214ENST00000515170 CARMIL2Q6F5E8 1435 aa13.73□□□□□ -0.21
RAPGEF6-214ENST00000515170 SCAF1Q9H7N4 1312 aaKnown RBP13.72□□□□□ -0.21
RAPGEF6-214ENST00000515170 FMN1Q68DA7 1419 aa13.71□□□□□ -0.21
RAPGEF6-214ENST00000515170 SALL2Q9Y467 1007 aaPredicted RBP13.71□□□□□ -0.22
RAPGEF6-214ENST00000515170 ARID4BQ4LE39 1312 aaPredicted RBP13.69□□□□□ -0.22
RAPGEF6-214ENST00000515170 CUX1P39880 1505 aa13.69□□□□□ -0.22
RAPGEF6-214ENST00000515170 FAM9BQ8IZU0 186 aa13.69□□□□□ -0.22
RAPGEF6-214ENST00000515170 HMGXB3Q12766 1538 aa13.69□□□□□ -0.22
RAPGEF6-214ENST00000515170 ARHGAP35Q9NRY4 1499 aa13.69□□□□□ -0.22
RAPGEF6-214ENST00000515170 TRHP20396 242 aaPredicted RBP13.68□□□□□ -0.22
RAPGEF6-214ENST00000515170 MLECQ14165 292 aa13.68□□□□□ -0.22
RAPGEF6-214ENST00000515170 HNRNPMP52272 730 aaKnown RBP eCLIP13.68□□□□□ -0.222e-6■■■■□ 22.8
RAPGEF6-214ENST00000515170 CYB5RLQ6IPT4 315 aa13.65□□□□□ -0.22
RAPGEF6-214ENST00000515170 EIF4G2P78344 907 aaKnown RBP eCLIP13.64□□□□□ -0.234e-9■■■■■ 36.4
RAPGEF6-214ENST00000515170 RAB3GAP2Q9H2M9 1393 aa13.64□□□□□ -0.23
RAPGEF6-214ENST00000515170 POLA1P09884 1462 aaPredicted RBP13.64□□□□□ -0.23
RAPGEF6-214ENST00000515170 TOPBP1Q92547 1522 aa13.63□□□□□ -0.23
RAPGEF6-214ENST00000515170 ERICH6Q7L0X2 663 aa13.63□□□□□ -0.23
RAPGEF6-214ENST00000515170 GGT6Q6P531 493 aa13.63□□□□□ -0.23
RAPGEF6-214ENST00000515170 PLEKHG5O94827 1062 aa13.62□□□□□ -0.23
RAPGEF6-214ENST00000515170 HNRNPUQ00839 825 aaKnown RBP eCLIP13.61□□□□□ -0.23
RAPGEF6-214ENST00000515170 SETD5Q9C0A6 1442 aa13.61□□□□□ -0.23
RAPGEF6-214ENST00000515170 PKD2Q13563 968 aa13.6□□□□□ -0.23
RAPGEF6-214ENST00000515170 ACIN1Q9UKV3 1341 aaKnown RBP13.59□□□□□ -0.23
RAPGEF6-214ENST00000515170 SLC24A1O60721 1099 aa13.59□□□□□ -0.23
RAPGEF6-214ENST00000515170 PTPRGP23470 1445 aa13.59□□□□□ -0.23
RAPGEF6-214ENST00000515170 ZNF644Q9H582 1327 aaPredicted RBP13.59□□□□□ -0.23
RAPGEF6-214ENST00000515170 DCAF11Q8TEB1 546 aa13.58□□□□□ -0.24
RAPGEF6-214ENST00000515170 BCL11AQ9H165 835 aa13.58□□□□□ -0.24
RAPGEF6-214ENST00000515170 CARD11Q9BXL7 1154 aa13.57□□□□□ -0.24
RAPGEF6-214ENST00000515170 ARAP1Q96P48 1450 aa13.57□□□□□ -0.24
RAPGEF6-214ENST00000515170 EFCAB2Q5VUJ9 269 aa13.56□□□□□ -0.24
RAPGEF6-214ENST00000515170 OSCARQ8IYS5 282 aa13.56□□□□□ -0.24
RAPGEF6-214ENST00000515170 PPP1R15AO75807 674 aaPredicted RBP13.56□□□□□ -0.24
RAPGEF6-214ENST00000515170 TOP2BQ02880 1626 aa13.56□□□□□ -0.24
RAPGEF6-214ENST00000515170 KIF21BO75037 1637 aa13.55□□□□□ -0.24
RAPGEF6-214ENST00000515170 MRS2Q9HD23 443 aa13.55□□□□□ -0.24
RAPGEF6-214ENST00000515170 MPHOSPH9Q99550 1183 aa13.54□□□□□ -0.24
RAPGEF6-214ENST00000515170 MRC2Q9UBG0 1479 aa13.54□□□□□ -0.24
RAPGEF6-214ENST00000515170 TMC1Q8TDI8 760 aa13.54□□□□□ -0.24
RAPGEF6-214ENST00000515170 NUP155O75694 1391 aa13.53□□□□□ -0.24
RAPGEF6-214ENST00000515170 PRXQ9BXM0 1461 aa13.52□□□□□ -0.24
RAPGEF6-214ENST00000515170 GRIN2BQ13224 1484 aa13.52□□□□□ -0.25
RAPGEF6-214ENST00000515170 KIF3BO15066 747 aa13.51□□□□□ -0.25
RAPGEF6-214ENST00000515170 PHLDB1Q86UU1 1377 aa13.5□□□□□ -0.25
RAPGEF6-214ENST00000515170 SAFB2Q14151 953 aaKnown RBP eCLIP13.48□□□□□ -0.25
RAPGEF6-214ENST00000515170 CCDC18Q5T9S5 1454 aa13.48□□□□□ -0.25
RAPGEF6-214ENST00000515170 PEG3Q9GZU2 1588 aa13.48□□□□□ -0.25
RAPGEF6-214ENST00000515170 CLSPNQ9HAW4 1339 aa13.47□□□□□ -0.25
RAPGEF6-214ENST00000515170 NUTM2DQ5VT03 806 aaPredicted RBP13.46□□□□□ -0.25
RAPGEF6-214ENST00000515170 SNAPC4Q5SXM2 1469 aa13.46□□□□□ -0.26
RAPGEF6-214ENST00000515170 IRX6P78412 446 aaPredicted RBP13.45□□□□□ -0.26
RAPGEF6-214ENST00000515170 SPAG9O60271 1321 aaKnown RBP13.45□□□□□ -0.26
RAPGEF6-214ENST00000515170 FKBP8Q14318 412 aa13.45□□□□□ -0.26
RAPGEF6-214ENST00000515170 DNMBPQ6XZF7 1577 aa13.45□□□□□ -0.26
RAPGEF6-214ENST00000515170 L3MBTL2Q969R5 705 aa13.45□□□□□ -0.26
RAPGEF6-214ENST00000515170 ANKRD30AQ9BXX3 1397 aa13.44□□□□□ -0.26
RAPGEF6-214ENST00000515170 URB2Q14146 1524 aaKnown RBP13.44□□□□□ -0.26
RAPGEF6-214ENST00000515170 ZNF608Q9ULD9 1512 aaPredicted RBP13.43□□□□□ -0.26
RAPGEF6-214ENST00000515170 CANXP27824 592 aaKnown RBP13.42□□□□□ -0.26
RAPGEF6-214ENST00000515170 IFT140Q96RY7 1462 aa13.42□□□□□ -0.26
RAPGEF6-214ENST00000515170 HSPA5P11021 654 aaKnown RBP13.42□□□□□ -0.26
RAPGEF6-214ENST00000515170 TNNT2P45379 298 aaPredicted RBP13.42□□□□□ -0.26
RAPGEF6-214ENST00000515170 PRG4Q92954 1404 aaPredicted RBP13.42□□□□□ -0.26
RAPGEF6-214ENST00000515170 DHX57Q6P158 1386 aaKnown RBP13.42□□□□□ -0.26
RAPGEF6-214ENST00000515170 NEFMP07197 916 aa13.41□□□□□ -0.26
RAPGEF6-214ENST00000515170 PRDM2Q13029 1718 aa13.4□□□□□ -0.26
RAPGEF6-214ENST00000515170 STK26Q9P289 416 aa13.4□□□□□ -0.26
RAPGEF6-214ENST00000515170 C14orf37Q86TY3 774 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms