RNA–Protein interactions for RNA: ENST00000514909.1

LDHBP3-201, Transcript of lactate dehydrogenase B pseudogene 3, humanhuman

BASIC

Gene LDHBP3, Length 822 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHBP3-201ENST00000514909 CFAP44Q96MT7 982 aa16.72■□□□□ 0.27
LDHBP3-201ENST00000514909 PRKCSHP14314 528 aaPredicted RBP16.69■□□□□ 0.26
LDHBP3-201ENST00000514909 SPRYD3Q8NCJ5 442 aa16.69■□□□□ 0.26
LDHBP3-201ENST00000514909 ZBTB47Q9UFB7 747 aaPredicted RBP16.69■□□□□ 0.26
LDHBP3-201ENST00000514909 C19orf67A6NJJ6 358 aa16.66■□□□□ 0.26
LDHBP3-201ENST00000514909 CHADLQ6NUI6 762 aa16.66■□□□□ 0.26
LDHBP3-201ENST00000514909 TRIM41Q8WV44 630 aa16.63■□□□□ 0.25
LDHBP3-201ENST00000514909 PLEKHG5O94827 1062 aa16.62■□□□□ 0.25
LDHBP3-201ENST00000514909 PRR29P0C7W0 189 aa16.61■□□□□ 0.25
LDHBP3-201ENST00000514909 CIZ1Q9ULV3 898 aaPredicted RBP16.56■□□□□ 0.24
LDHBP3-201ENST00000514909 TSHZ2Q9NRE2 1034 aa16.54■□□□□ 0.24
LDHBP3-201ENST00000514909 CHGAP10645 457 aaKnown RBP16.53■□□□□ 0.24
LDHBP3-201ENST00000514909 TPRNQ4KMQ1 711 aa16.52■□□□□ 0.24
LDHBP3-201ENST00000514909 DNAJC5Q9H3Z4 198 aa16.49■□□□□ 0.23
LDHBP3-201ENST00000514909 HS6ST3Q8IZP7 471 aa16.48■□□□□ 0.23
LDHBP3-201ENST00000514909 GABBR2O75899 941 aa16.43■□□□□ 0.22
LDHBP3-201ENST00000514909 GSE1Q14687 1217 aa16.39■□□□□ 0.21
LDHBP3-201ENST00000514909 FARP1Q9Y4F1 1045 aaPredicted RBP16.39■□□□□ 0.21
LDHBP3-201ENST00000514909 RNF25Q96BH1 459 aaPredicted RBP16.31■□□□□ 0.2
LDHBP3-201ENST00000514909 CD44P16070 742 aaKnown RBP16.29■□□□□ 0.2
LDHBP3-201ENST00000514909 NUBP1P53384 320 aa16.27■□□□□ 0.2
LDHBP3-201ENST00000514909 NBR1Q14596 966 aa16.27■□□□□ 0.2
LDHBP3-201ENST00000514909 CREBZFQ9NS37 354 aa16.26■□□□□ 0.19
LDHBP3-201ENST00000514909 RIOK3O14730 519 aaKnown RBP16.22■□□□□ 0.19
LDHBP3-201ENST00000514909 NKX1-1Q15270 411 aaPredicted RBP16.17■□□□□ 0.18
LDHBP3-201ENST00000514909 POTEIP0CG38 1075 aa16.15■□□□□ 0.18
LDHBP3-201ENST00000514909 GTPBP6O43824 516 aaPredicted RBP16.13■□□□□ 0.17
LDHBP3-201ENST00000514909 DCAF8Q5TAQ9 597 aa16.13■□□□□ 0.17
LDHBP3-201ENST00000514909 VGFO15240 615 aaPredicted RBP16.12■□□□□ 0.17
LDHBP3-201ENST00000514909 CHRM1P11229 460 aaPredicted RBP16.11■□□□□ 0.17
LDHBP3-201ENST00000514909 FAM212AQ96EL1 285 aa16.11■□□□□ 0.17
LDHBP3-201ENST00000514909 SGIP1Q9BQI5 828 aa16.09■□□□□ 0.17
LDHBP3-201ENST00000514909 ZNF579Q8NAF0 562 aaKnown RBP16.07■□□□□ 0.16
LDHBP3-201ENST00000514909 CLCN6P51797 869 aa16.06■□□□□ 0.16
LDHBP3-201ENST00000514909 STK25O00506 426 aa16.04■□□□□ 0.16
LDHBP3-201ENST00000514909 LHX8Q68G74 356 aa16.04■□□□□ 0.16
LDHBP3-201ENST00000514909 RYDENQ9NUL5 291 aaKnown RBP16.04■□□□□ 0.16
LDHBP3-201ENST00000514909 MNX1P50219 401 aaPredicted RBP16.03■□□□□ 0.16
LDHBP3-201ENST00000514909 ZRANB1Q9UGI0 708 aa16.03■□□□□ 0.16
LDHBP3-201ENST00000514909 RASEFQ8IZ41 740 aa15.91■□□□□ 0.14
LDHBP3-201ENST00000514909 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.9■□□□□ 0.14
LDHBP3-201ENST00000514909 ZFP91Q96JP5 570 aaPredicted RBP15.9■□□□□ 0.14
LDHBP3-201ENST00000514909 BCL11BQ9C0K0 894 aaPredicted RBP15.9■□□□□ 0.14
LDHBP3-201ENST00000514909 GALR2O43603 387 aaPredicted RBP15.89■□□□□ 0.13
LDHBP3-201ENST00000514909 STK24Q9Y6E0 443 aa15.89■□□□□ 0.13
LDHBP3-201ENST00000514909 DCBLD2Q96PD2 775 aa15.88■□□□□ 0.13
LDHBP3-201ENST00000514909 PHF12Q96QT6 1004 aa15.85■□□□□ 0.13
LDHBP3-201ENST00000514909 P3H3Q8IVL6 736 aa15.83■□□□□ 0.12
LDHBP3-201ENST00000514909 PAK3O75914 559 aaPredicted RBP15.8■□□□□ 0.12
LDHBP3-201ENST00000514909 PYGBP11216 843 aa15.77■□□□□ 0.12
LDHBP3-201ENST00000514909 ZNF467Q7Z7K2 595 aaPredicted RBP15.69■□□□□ 0.1
LDHBP3-201ENST00000514909 ERICH6Q7L0X2 663 aa15.66■□□□□ 0.1
LDHBP3-201ENST00000514909 GTF3C3Q9Y5Q9 886 aa15.65■□□□□ 0.1
LDHBP3-201ENST00000514909 TMEM132AQ24JP5 1023 aa15.64■□□□□ 0.09
LDHBP3-201ENST00000514909 PELP1Q8IZL8 1130 aaKnown RBP15.64■□□□□ 0.09
LDHBP3-201ENST00000514909 MS4A3Q96HJ5 214 aa15.64■□□□□ 0.09
LDHBP3-201ENST00000514909 TIMELESSQ9UNS1 1208 aa15.62■□□□□ 0.09
LDHBP3-201ENST00000514909 POTEB2H3BUK9 544 aa15.61■□□□□ 0.09
LDHBP3-201ENST00000514909 WDR70Q9NW82 654 aa15.61■□□□□ 0.09
LDHBP3-201ENST00000514909 PDAP1Q13442 181 aaKnown RBP15.6■□□□□ 0.09
LDHBP3-201ENST00000514909 CCDC61Q9Y6R9 512 aa15.6■□□□□ 0.09
LDHBP3-201ENST00000514909 KCNV2Q8TDN2 545 aa15.59■□□□□ 0.09
LDHBP3-201ENST00000514909 TSPYL2Q9H2G4 693 aaPredicted RBP15.59■□□□□ 0.09
LDHBP3-201ENST00000514909 TULP1O00294 542 aaPredicted RBP15.58■□□□□ 0.08
LDHBP3-201ENST00000514909 CADPS2Q86UW7 1296 aa15.57■□□□□ 0.08
LDHBP3-201ENST00000514909 ASTLQ6HA08 431 aaPredicted RBP15.56■□□□□ 0.08
LDHBP3-201ENST00000514909 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.54■□□□□ 0.08
LDHBP3-201ENST00000514909 OTUD5Q96G74 571 aa15.54■□□□□ 0.08
LDHBP3-201ENST00000514909 LMOD2Q6P5Q4 547 aa15.53■□□□□ 0.08
LDHBP3-201ENST00000514909 ATMINO43313 823 aaPredicted RBP15.52■□□□□ 0.08
LDHBP3-201ENST00000514909 KIF12Q96FN5 646 aa15.51■□□□□ 0.07
LDHBP3-201ENST00000514909 MFRPQ9BY79 579 aa15.48■□□□□ 0.07
LDHBP3-201ENST00000514909 PSEN1P49768 467 aa15.44■□□□□ 0.06
LDHBP3-201ENST00000514909 ARHGEF1Q92888 912 aaKnown RBP15.44■□□□□ 0.06
LDHBP3-201ENST00000514909 METRNQ9UJH8 293 aa15.43■□□□□ 0.06
LDHBP3-201ENST00000514909 PCDHB8Q9UN66 801 aa15.43■□□□□ 0.06
LDHBP3-201ENST00000514909 PCDHB13Q9Y5F0 798 aa15.43■□□□□ 0.06
LDHBP3-201ENST00000514909 TRPC6Q9Y210 931 aa15.41■□□□□ 0.06
LDHBP3-201ENST00000514909 SLC39A7Q92504 469 aa15.4■□□□□ 0.06
LDHBP3-201ENST00000514909 MAP3K13O43283 966 aa15.39■□□□□ 0.05
LDHBP3-201ENST00000514909 POTEJP0CG39 1038 aa15.39■□□□□ 0.05
LDHBP3-201ENST00000514909 C7P10643 843 aa15.39■□□□□ 0.05
LDHBP3-201ENST00000514909 ATN1P54259 1190 aaPredicted RBP15.39■□□□□ 0.05
LDHBP3-201ENST00000514909 BMP2KQ9NSY1 1161 aaPredicted RBP15.35■□□□□ 0.05
LDHBP3-201ENST00000514909 FBXO22Q8NEZ5 403 aa15.34■□□□□ 0.05
LDHBP3-201ENST00000514909 SOX12O15370 315 aa15.33■□□□□ 0.04
LDHBP3-201ENST00000514909 NLRP6P59044 892 aa15.33■□□□□ 0.04
LDHBP3-201ENST00000514909 E2F4Q16254 413 aa15.33■□□□□ 0.04
LDHBP3-201ENST00000514909 POTEFA5A3E0 1075 aa15.29■□□□□ 0.04
LDHBP3-201ENST00000514909 PPP1R37O75864 691 aa15.29■□□□□ 0.04
LDHBP3-201ENST00000514909 TESPA1A2RU30 521 aaPredicted RBP15.28■□□□□ 0.04
LDHBP3-201ENST00000514909 TIE1P35590 1138 aa15.28■□□□□ 0.04
LDHBP3-201ENST00000514909 BRPF1P55201 1214 aaPredicted RBP15.28■□□□□ 0.04
LDHBP3-201ENST00000514909 ZC3H15Q8WU90 426 aaKnown RBP15.27■□□□□ 0.04
LDHBP3-201ENST00000514909 EFCAB3Q8N7B9 438 aa15.26■□□□□ 0.03
LDHBP3-201ENST00000514909 ARXQ96QS3 562 aa15.26■□□□□ 0.03
LDHBP3-201ENST00000514909 IFNL1Q8IU54 200 aa15.25■□□□□ 0.03
LDHBP3-201ENST00000514909 TTLL13PA6NNM8 815 aa15.22■□□□□ 0.03
LDHBP3-201ENST00000514909 CABP2Q9NPB3 220 aa15.21■□□□□ 0.03
LDHBP3-201ENST00000514909 PHF8Q9UPP1 1060 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms