RNA–Protein interactions for RNA: ENST00000514705.5

TSPAN17-208, Transcript of tetraspanin 17, humanhuman

TSL 2

Gene TSPAN17, Length 4,445 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-208ENST00000514705 HMGXB3Q12766 1538 aa19.39■□□□□ 0.69
TSPAN17-208ENST00000514705 CHMP7Q8WUX9 453 aaPredicted RBP19.37■□□□□ 0.69
TSPAN17-208ENST00000514705 CCNB3Q8WWL7 1395 aa19.36■□□□□ 0.69
TSPAN17-208ENST00000514705 DNAJC5BQ9UF47 199 aa19.34■□□□□ 0.69
TSPAN17-208ENST00000514705 FANCD2Q9BXW9 1451 aa19.34■□□□□ 0.69
TSPAN17-208ENST00000514705 TONSLQ96HA7 1378 aa19.33■□□□□ 0.69
TSPAN17-208ENST00000514705 CUX2O14529 1486 aa19.33■□□□□ 0.68
TSPAN17-208ENST00000514705 RBM19Q9Y4C8 960 aaKnown RBP19.27■□□□□ 0.68
TSPAN17-208ENST00000514705 RAB3GAP2Q9H2M9 1393 aa19.25■□□□□ 0.67
TSPAN17-208ENST00000514705 ARID3CA6NKF2 412 aa19.24■□□□□ 0.67
TSPAN17-208ENST00000514705 PEG3Q9GZU2 1588 aa19.24■□□□□ 0.67
TSPAN17-208ENST00000514705 FAM9BQ8IZU0 186 aa19.24■□□□□ 0.67
TSPAN17-208ENST00000514705 CFTRP13569 1480 aa19.24■□□□□ 0.67
TSPAN17-208ENST00000514705 BCL11AQ9H165 835 aa19.22■□□□□ 0.67
TSPAN17-208ENST00000514705 TDRD9Q8NDG6 1382 aaKnown RBP19.22■□□□□ 0.67
TSPAN17-208ENST00000514705 CARMIL1Q5VZK9 1371 aa19.19■□□□□ 0.66
TSPAN17-208ENST00000514705 NESP48681 1621 aa19.19■□□□□ 0.66
TSPAN17-208ENST00000514705 CHIC2Q9UKJ5 165 aa19.18■□□□□ 0.66
TSPAN17-208ENST00000514705 KIF21BO75037 1637 aa19.17■□□□□ 0.66
TSPAN17-208ENST00000514705 ZNF326Q5BKZ1 582 aaKnown RBP19.15■□□□□ 0.66
TSPAN17-208ENST00000514705 SETD5Q9C0A6 1442 aa19.13■□□□□ 0.65
TSPAN17-208ENST00000514705 MYT1LQ9UL68 1186 aa19.12■□□□□ 0.65
TSPAN17-208ENST00000514705 SYNJ1O43426 1573 aa19.1■□□□□ 0.65
TSPAN17-208ENST00000514705 SENP3-EIF4A1A0A087X0R7 540 aa19.09■□□□□ 0.65
TSPAN17-208ENST00000514705 RTL5Q5HYW3 569 aaPredicted RBP19.09■□□□□ 0.65
TSPAN17-208ENST00000514705 MRS2Q9HD23 443 aa19.08■□□□□ 0.64
TSPAN17-208ENST00000514705 CCER2I3L3R5 266 aa19.07■□□□□ 0.64
TSPAN17-208ENST00000514705 NBR1Q14596 966 aa19.07■□□□□ 0.64
TSPAN17-208ENST00000514705 RRP7BPQ9NSQ0 103 aa19.07■□□□□ 0.64
TSPAN17-208ENST00000514705 PPP1R15AO75807 674 aaPredicted RBP19.06■□□□□ 0.64
TSPAN17-208ENST00000514705 FGD5Q6ZNL6 1462 aa19.06■□□□□ 0.64
TSPAN17-208ENST00000514705 MTUS2Q5JR59 1369 aa19.04■□□□□ 0.64
TSPAN17-208ENST00000514705 B4GALNT3Q6L9W6 998 aa19■□□□□ 0.63
TSPAN17-208ENST00000514705 EIF4G2P78344 907 aaKnown RBP eCLIP18.99■□□□□ 0.63
TSPAN17-208ENST00000514705 ARAP1Q96P48 1450 aa18.99■□□□□ 0.63
TSPAN17-208ENST00000514705 RAD54L2Q9Y4B4 1467 aa18.99■□□□□ 0.63
TSPAN17-208ENST00000514705 TIMELESSQ9UNS1 1208 aa18.98■□□□□ 0.63
TSPAN17-208ENST00000514705 NPM2Q86SE8 214 aaKnown RBP18.97■□□□□ 0.63
TSPAN17-208ENST00000514705 ANP32AP39687 249 aaKnown RBP18.95■□□□□ 0.62
TSPAN17-208ENST00000514705 CCDC136Q96JN2 1154 aa18.93■□□□□ 0.62
TSPAN17-208ENST00000514705 LAMC3Q9Y6N6 1575 aa18.92■□□□□ 0.62
TSPAN17-208ENST00000514705 PPP4R2Q9NY27 417 aa18.92■□□□□ 0.62
TSPAN17-208ENST00000514705 RRBP1Q9P2E9 1410 aaKnown RBP18.92■□□□□ 0.62
TSPAN17-208ENST00000514705 NPM1P06748 294 aaKnown RBP eCLIP18.91■□□□□ 0.62
TSPAN17-208ENST00000514705 SALL2Q9Y467 1007 aaPredicted RBP18.91■□□□□ 0.62
TSPAN17-208ENST00000514705 CUX1P39880 1505 aa18.9■□□□□ 0.62
TSPAN17-208ENST00000514705 MRC2Q9UBG0 1479 aa18.89■□□□□ 0.62
TSPAN17-208ENST00000514705 HSPA5P11021 654 aaKnown RBP18.89■□□□□ 0.62
TSPAN17-208ENST00000514705 IGF1RP08069 1367 aa18.89■□□□□ 0.61
TSPAN17-208ENST00000514705 ZNF777Q9ULD5 760 aaPredicted RBP18.89■□□□□ 0.61
TSPAN17-208ENST00000514705 TOPBP1Q92547 1522 aa18.89■□□□□ 0.61
TSPAN17-208ENST00000514705 FHAD1B1AJZ9 1412 aa18.88■□□□□ 0.61
TSPAN17-208ENST00000514705 GAPVD1Q14C86 1478 aa18.87■□□□□ 0.61
TSPAN17-208ENST00000514705 PHLDB1Q86UU1 1377 aa18.86■□□□□ 0.61
TSPAN17-208ENST00000514705 DAXXQ9UER7 740 aaPredicted RBP18.86■□□□□ 0.61
TSPAN17-208ENST00000514705 TOP2BQ02880 1626 aa18.85■□□□□ 0.61
TSPAN17-208ENST00000514705 FOXD1Q16676 465 aa18.84■□□□□ 0.61
TSPAN17-208ENST00000514705 ARHGAP35Q9NRY4 1499 aa18.83■□□□□ 0.61
TSPAN17-208ENST00000514705 PRXQ9BXM0 1461 aa18.83■□□□□ 0.6
TSPAN17-208ENST00000514705 AQRO60306 1485 aaKnown RBP eCLIP18.83■□□□□ 0.6
TSPAN17-208ENST00000514705 POLA1P09884 1462 aaPredicted RBP18.82■□□□□ 0.6
TSPAN17-208ENST00000514705 ZBTB47Q9UFB7 747 aaPredicted RBP18.82■□□□□ 0.6
TSPAN17-208ENST00000514705 FHOD3Q2V2M9 1422 aa18.8■□□□□ 0.6
TSPAN17-208ENST00000514705 TMC1Q8TDI8 760 aa18.8■□□□□ 0.6
TSPAN17-208ENST00000514705 WDR97A6NE52 1622 aa18.79■□□□□ 0.6
TSPAN17-208ENST00000514705 DNMBPQ6XZF7 1577 aa18.79■□□□□ 0.6
TSPAN17-208ENST00000514705 SLC4A1APQ9BWU0 796 aaKnown RBP18.77■□□□□ 0.6
TSPAN17-208ENST00000514705 DEKP35659 375 aaKnown RBP18.77■□□□□ 0.6
TSPAN17-208ENST00000514705 PLEKHD1A6NEE1 506 aa18.77■□□□□ 0.59
TSPAN17-208ENST00000514705 NOP58Q9Y2X3 529 aaKnown RBP18.75■□□□□ 0.59
TSPAN17-208ENST00000514705 ERICH3Q5RHP9 1530 aa18.74■□□□□ 0.59
TSPAN17-208ENST00000514705 IFT140Q96RY7 1462 aa18.72■□□□□ 0.59
TSPAN17-208ENST00000514705 CARMIL2Q6F5E8 1435 aa18.71■□□□□ 0.59
TSPAN17-208ENST00000514705 JPH4Q96JJ6 628 aa18.71■□□□□ 0.59
TSPAN17-208ENST00000514705 LRRC9Q6ZRR7 1453 aa18.71■□□□□ 0.59
TSPAN17-208ENST00000514705 MSH5O43196 834 aa18.71■□□□□ 0.59
TSPAN17-208ENST00000514705 KDM2AQ9Y2K7 1162 aa18.7■□□□□ 0.58
TSPAN17-208ENST00000514705 L3MBTL2Q969R5 705 aa18.7■□□□□ 0.58
TSPAN17-208ENST00000514705 GRIN2BQ13224 1484 aa18.69■□□□□ 0.58
TSPAN17-208ENST00000514705 FANCIQ9NVI1 1328 aa18.68■□□□□ 0.58
TSPAN17-208ENST00000514705 URB2Q14146 1524 aaKnown RBP18.67■□□□□ 0.58
TSPAN17-208ENST00000514705 MPHOSPH9Q99550 1183 aa18.65■□□□□ 0.58
TSPAN17-208ENST00000514705 ERICH6BQ5W0A0 696 aa18.64■□□□□ 0.57
TSPAN17-208ENST00000514705 CCDC18Q5T9S5 1454 aa18.64■□□□□ 0.57
TSPAN17-208ENST00000514705 FMN1Q68DA7 1419 aa18.63■□□□□ 0.57
TSPAN17-208ENST00000514705 CCDC184Q52MB2 194 aa18.63■□□□□ 0.57
TSPAN17-208ENST00000514705 PRKRIP1Q9H875 184 aaPredicted RBP18.63■□□□□ 0.57
TSPAN17-208ENST00000514705 WASHC2AQ641Q2 1341 aa18.63■□□□□ 0.57
TSPAN17-208ENST00000514705 ABCA10Q8WWZ4 1543 aa18.61■□□□□ 0.57
TSPAN17-208ENST00000514705 LAS1LQ9Y4W2 734 aaKnown RBP18.61■□□□□ 0.57
TSPAN17-208ENST00000514705 MAPKBP1O60336 1514 aa18.6■□□□□ 0.57
TSPAN17-208ENST00000514705 RTN4Q9NQC3 1192 aaKnown RBP18.6■□□□□ 0.57
TSPAN17-208ENST00000514705 TSPY4P0CV99 314 aa18.57■□□□□ 0.56
TSPAN17-208ENST00000514705 TSPY10P0CW01 314 aa18.57■□□□□ 0.56
TSPAN17-208ENST00000514705 CFDP1Q9UEE9 299 aaPredicted RBP18.56■□□□□ 0.56
TSPAN17-208ENST00000514705 TIAM1Q13009 1591 aa18.56■□□□□ 0.56
TSPAN17-208ENST00000514705 OSCARQ8IYS5 282 aa18.55■□□□□ 0.56
TSPAN17-208ENST00000514705 FGD6Q6ZV73 1430 aa18.55■□□□□ 0.56
TSPAN17-208ENST00000514705 BIVM-ERCC5R4GMW8 1640 aa18.54■□□□□ 0.56
TSPAN17-208ENST00000514705 UACAQ9BZF9 1416 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms