RNA–Protein interactions for RNA: ENST00000514705.5

TSPAN17-208, Transcript of tetraspanin 17, humanhuman

TSL 2

Gene TSPAN17, Length 4,445 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-208ENST00000514705 NISCHQ9Y2I1 1504 aa26.18■■□□□ 1.78
TSPAN17-208ENST00000514705 DCAF8L2P0C7V8 631 aa23.97■■□□□ 1.43
TSPAN17-208ENST00000514705 SUPT5HO00267 1087 aaKnown RBP23.67■■□□□ 1.38
TSPAN17-208ENST00000514705 SHROOM4Q9ULL8 1493 aa23.65■■□□□ 1.38
TSPAN17-208ENST00000514705 PCGF6Q9BYE7 350 aa22.85■■□□□ 1.25
TSPAN17-208ENST00000514705 HRCP23327 699 aa22.58■■□□□ 1.2
TSPAN17-208ENST00000514705 CHIC1Q5VXU3 224 aa22.41■■□□□ 1.18
TSPAN17-208ENST00000514705 PPARGC1BQ86YN6 1023 aaKnown RBP22.37■■□□□ 1.17
TSPAN17-208ENST00000514705 ABCC9O60706 1549 aa22.32■■□□□ 1.16
TSPAN17-208ENST00000514705 EHMT2Q96KQ7 1210 aa22.31■■□□□ 1.16
TSPAN17-208ENST00000514705 CCDC180Q9P1Z9 1646 aa22.25■■□□□ 1.15
TSPAN17-208ENST00000514705 LOC105371045A0A1W2PR82 267 aa22.18■■□□□ 1.14
TSPAN17-208ENST00000514705 FAM9AQ8IZU1 332 aaPredicted RBP22.09■■□□□ 1.13
TSPAN17-208ENST00000514705 TRIM26Q12899 539 aaPredicted RBP21.9■■□□□ 1.1
TSPAN17-208ENST00000514705 MYO15BQ96JP2 1530 aa21.86■■□□□ 1.09
TSPAN17-208ENST00000514705 TRIM41Q8WV44 630 aa21.79■■□□□ 1.08
TSPAN17-208ENST00000514705 ZCCHC6Q5VYS8 1495 aaKnown RBP21.79■■□□□ 1.08
TSPAN17-208ENST00000514705 ZEB1P37275 1124 aaPredicted RBP21.75■■□□□ 1.07
TSPAN17-208ENST00000514705 TTBK1Q5TCY1 1321 aaPredicted RBP21.64■■□□□ 1.05
TSPAN17-208ENST00000514705 PELP1Q8IZL8 1130 aaKnown RBP21.53■■□□□ 1.04
TSPAN17-208ENST00000514705 PABPN1Q86U42 306 aaKnown RBP eCLIP21.53■■□□□ 1.04
TSPAN17-208ENST00000514705 CCER1Q8TC90 406 aaPredicted RBP21.5■■□□□ 1.03
TSPAN17-208ENST00000514705 DCAF1Q9Y4B6 1507 aa21.39■■□□□ 1.01
TSPAN17-208ENST00000514705 SCRIBQ14160 1630 aa21.29■■□□□ 1
TSPAN17-208ENST00000514705 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.28■■□□□ 1
TSPAN17-208ENST00000514705 CENPBP07199 599 aaPredicted RBP21.26■□□□□ 0.99
TSPAN17-208ENST00000514705 RB1CC1Q8TDY2 1594 aa21.25■□□□□ 0.99
TSPAN17-208ENST00000514705 NACADO15069 1562 aa21.23■□□□□ 0.99
TSPAN17-208ENST00000514705 YTHDC1Q96MU7 727 aaKnown RBP21.14■□□□□ 0.98
TSPAN17-208ENST00000514705 SCAF1Q9H7N4 1312 aaKnown RBP21.1■□□□□ 0.97
TSPAN17-208ENST00000514705 DIEXFQ68CQ4 756 aaKnown RBP21.02■□□□□ 0.95
TSPAN17-208ENST00000514705 UBTFP17480 764 aaKnown RBP21■□□□□ 0.95
TSPAN17-208ENST00000514705 GTF3C3Q9Y5Q9 886 aa20.96■□□□□ 0.95
TSPAN17-208ENST00000514705 RANGAP1P46060 587 aaPredicted RBP20.95■□□□□ 0.94
TSPAN17-208ENST00000514705 ACIN1Q9UKV3 1341 aaKnown RBP20.91■□□□□ 0.94
TSPAN17-208ENST00000514705 APLP2Q06481 763 aa20.89■□□□□ 0.93
TSPAN17-208ENST00000514705 NEUROD1Q13562 356 aa20.84■□□□□ 0.93
TSPAN17-208ENST00000514705 HNRNPUL2Q1KMD3 747 aaKnown RBP20.78■□□□□ 0.92
TSPAN17-208ENST00000514705 RSF1Q96T23 1441 aaPredicted RBP20.71■□□□□ 0.91
TSPAN17-208ENST00000514705 MYT1Q01538 1121 aa20.65■□□□□ 0.9
TSPAN17-208ENST00000514705 ZNF316A6NFI3 1004 aaPredicted RBP20.58■□□□□ 0.88
TSPAN17-208ENST00000514705 CECR2Q9BXF3 1484 aa20.49■□□□□ 0.87
TSPAN17-208ENST00000514705 BAZ1AQ9NRL2 1556 aaPredicted RBP20.38■□□□□ 0.85
TSPAN17-208ENST00000514705 CSRNP3Q8WYN3 585 aa20.37■□□□□ 0.85
TSPAN17-208ENST00000514705 ITGAEP38570 1179 aa20.35■□□□□ 0.85
TSPAN17-208ENST00000514705 MIER1Q8N108 512 aa20.33■□□□□ 0.85
TSPAN17-208ENST00000514705 MROH2BQ7Z745 1585 aa20.25■□□□□ 0.83
TSPAN17-208ENST00000514705 BAZ1BQ9UIG0 1483 aaKnown RBP20.23■□□□□ 0.83
TSPAN17-208ENST00000514705 CEP162Q5TB80 1403 aa20.2■□□□□ 0.82
TSPAN17-208ENST00000514705 ATP1B4Q9UN42 357 aaPredicted RBP20.17■□□□□ 0.82
TSPAN17-208ENST00000514705 BCANQ96GW7 911 aa20.11■□□□□ 0.81
TSPAN17-208ENST00000514705 NEFLP07196 543 aa20.08■□□□□ 0.8
TSPAN17-208ENST00000514705 SOGA1O94964 1423 aa20.03■□□□□ 0.8
TSPAN17-208ENST00000514705 SMARCA2P51531 1590 aa20■□□□□ 0.79
TSPAN17-208ENST00000514705 TNIKQ9UKE5 1360 aa20■□□□□ 0.79
TSPAN17-208ENST00000514705 WIZO95785 1651 aa19.97■□□□□ 0.79
TSPAN17-208ENST00000514705 SMARCA4P51532 1647 aa19.97■□□□□ 0.79
TSPAN17-208ENST00000514705 CCDC88BA6NC98 1476 aa19.97■□□□□ 0.79
TSPAN17-208ENST00000514705 ABCC8Q09428 1581 aa19.95■□□□□ 0.78
TSPAN17-208ENST00000514705 ATAD2BQ9ULI0 1458 aa19.93■□□□□ 0.78
TSPAN17-208ENST00000514705 ERICH6Q7L0X2 663 aa19.9■□□□□ 0.78
TSPAN17-208ENST00000514705 CLIP1P30622 1438 aa19.89■□□□□ 0.78
TSPAN17-208ENST00000514705 GOLGA3Q08378 1498 aa19.86■□□□□ 0.77
TSPAN17-208ENST00000514705 TOP2AP11388 1531 aaKnown RBP19.85■□□□□ 0.77
TSPAN17-208ENST00000514705 BICRAQ9NZM4 1560 aa19.83■□□□□ 0.77
TSPAN17-208ENST00000514705 FAM50AQ14320 339 aaKnown RBP19.83■□□□□ 0.76
TSPAN17-208ENST00000514705 EEA1Q15075 1411 aa19.8■□□□□ 0.76
TSPAN17-208ENST00000514705 FKBP8Q14318 412 aa19.78■□□□□ 0.76
TSPAN17-208ENST00000514705 EIF4G1Q04637 1599 aaKnown RBP19.77■□□□□ 0.76
TSPAN17-208ENST00000514705 WRNQ14191 1432 aaPredicted RBP eCLIP19.77■□□□□ 0.76
TSPAN17-208ENST00000514705 SUPT16HQ9Y5B9 1047 aaKnown RBP19.77■□□□□ 0.75
TSPAN17-208ENST00000514705 RUSC2Q8N2Y8 1516 aa19.76■□□□□ 0.75
TSPAN17-208ENST00000514705 DDX10Q13206 875 aaKnown RBP19.75■□□□□ 0.75
TSPAN17-208ENST00000514705 FBLN2P98095 1184 aa19.73■□□□□ 0.75
TSPAN17-208ENST00000514705 CLSPNQ9HAW4 1339 aa19.71■□□□□ 0.75
TSPAN17-208ENST00000514705 HIRIP3Q9BW71 556 aaPredicted RBP19.68■□□□□ 0.74
TSPAN17-208ENST00000514705 UNC13AQ9UPW8 1703 aa19.66■□□□□ 0.74
TSPAN17-208ENST00000514705 NCAPD3P42695 1498 aa19.66■□□□□ 0.74
TSPAN17-208ENST00000514705 CEP164Q9UPV0 1460 aa19.65■□□□□ 0.74
TSPAN17-208ENST00000514705 TRIM52Q96A61 297 aa19.65■□□□□ 0.74
TSPAN17-208ENST00000514705 ANP32CO43423 234 aa19.64■□□□□ 0.73
TSPAN17-208ENST00000514705 P3H3Q8IVL6 736 aa19.64■□□□□ 0.73
TSPAN17-208ENST00000514705 CNGB1Q14028 1251 aaPredicted RBP19.61■□□□□ 0.73
TSPAN17-208ENST00000514705 CADPSQ9ULU8 1353 aa19.61■□□□□ 0.73
TSPAN17-208ENST00000514705 ERCC6Q03468 1493 aa19.58■□□□□ 0.72
TSPAN17-208ENST00000514705 VPS8Q8N3P4 1428 aa19.58■□□□□ 0.72
TSPAN17-208ENST00000514705 KANK4Q5T7N3 995 aaPredicted RBP19.56■□□□□ 0.72
TSPAN17-208ENST00000514705 ANP32EQ9BTT0 268 aa19.53■□□□□ 0.72
TSPAN17-208ENST00000514705 PDS5BQ9NTI5 1447 aa19.53■□□□□ 0.72
TSPAN17-208ENST00000514705 KCNH8Q96L42 1107 aa19.52■□□□□ 0.71
TSPAN17-208ENST00000514705 TSHZ2Q9NRE2 1034 aa19.51■□□□□ 0.71
TSPAN17-208ENST00000514705 CC2D2AQ9P2K1 1620 aa19.5■□□□□ 0.71
TSPAN17-208ENST00000514705 SIN3AQ96ST3 1273 aa19.48■□□□□ 0.71
TSPAN17-208ENST00000514705 POLR3GLQ9BT43 218 aa19.46■□□□□ 0.71
TSPAN17-208ENST00000514705 IRX6P78412 446 aaPredicted RBP19.44■□□□□ 0.7
TSPAN17-208ENST00000514705 KIF27Q86VH2 1401 aa19.44■□□□□ 0.7
TSPAN17-208ENST00000514705 CDK11AQ9UQ88 783 aaPredicted RBP19.43■□□□□ 0.7
TSPAN17-208ENST00000514705 DHX57Q6P158 1386 aaKnown RBP19.42■□□□□ 0.7
TSPAN17-208ENST00000514705 RAPGEF2Q9Y4G8 1499 aa19.42■□□□□ 0.7
TSPAN17-208ENST00000514705 HNRNPUQ00839 825 aaKnown RBP eCLIP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms