RNA–Protein interactions for RNA: ENST00000514600.5

LINC00616-205, long intergenic non-protein coding RNA 616, humanhuman

TSL 1 (best) BASIC

Gene LINC00616, Length 2,017 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00616-205ENST00000514600 CDK11AQ9UQ88 783 aaPredicted RBP9.92□□□□□ -0.82
LINC00616-205ENST00000514600 SPRYD3Q8NCJ5 442 aa9.91□□□□□ -0.82
LINC00616-205ENST00000514600 ABCB7O75027 752 aa9.87□□□□□ -0.83
LINC00616-205ENST00000514600 PDIA4P13667 645 aaKnown RBP9.87□□□□□ -0.83
LINC00616-205ENST00000514600 SP7Q8TDD2 431 aaPredicted RBP9.87□□□□□ -0.83
LINC00616-205ENST00000514600 BRPF1P55201 1214 aaPredicted RBP9.86□□□□□ -0.83
LINC00616-205ENST00000514600 SPDYE4A6NLX3 237 aa9.85□□□□□ -0.83
LINC00616-205ENST00000514600 ARID3AQ99856 593 aa9.85□□□□□ -0.83
LINC00616-205ENST00000514600 IFNLR1Q8IU57 520 aaPredicted RBP9.84□□□□□ -0.83
LINC00616-205ENST00000514600 ZBTB7CA1YPR0 619 aa9.83□□□□□ -0.84
LINC00616-205ENST00000514600 NECTIN2Q92692 538 aa9.83□□□□□ -0.84
LINC00616-205ENST00000514600 HSP90B1P14625 803 aaKnown RBP9.82□□□□□ -0.84
LINC00616-205ENST00000514600 HMGB1P09429 215 aaKnown RBP9.81□□□□□ -0.84
LINC00616-205ENST00000514600 VASPP50552 380 aaPredicted RBP9.78□□□□□ -0.84
LINC00616-205ENST00000514600 ZMYND15Q9H091 742 aa9.75□□□□□ -0.85
LINC00616-205ENST00000514600 C1orf115Q9H7X2 142 aa9.75□□□□□ -0.85
LINC00616-205ENST00000514600 RSPH6AQ9H0K4 717 aa9.73□□□□□ -0.85
LINC00616-205ENST00000514600 UBE2Q2Q8WVN8 375 aa9.73□□□□□ -0.85
LINC00616-205ENST00000514600 PUS7Q96PZ0 661 aaKnown RBP9.72□□□□□ -0.85
LINC00616-205ENST00000514600 DHX37Q8IY37 1157 aaKnown RBP9.71□□□□□ -0.86
LINC00616-205ENST00000514600 BRD2P25440 801 aaKnown RBP9.68□□□□□ -0.86
LINC00616-205ENST00000514600 DSG3P32926 999 aa9.68□□□□□ -0.86
LINC00616-205ENST00000514600 PROM2Q8N271 834 aa9.68□□□□□ -0.86
LINC00616-205ENST00000514600 ECM2O94769 699 aaPredicted RBP9.64□□□□□ -0.87
LINC00616-205ENST00000514600 NEUROD2Q15784 382 aa9.63□□□□□ -0.87
LINC00616-205ENST00000514600 RGL2O15211 777 aa9.6□□□□□ -0.87
LINC00616-205ENST00000514600 OSCARQ8IYS5 282 aa9.6□□□□□ -0.87
LINC00616-205ENST00000514600 KCTD17Q8N5Z5 321 aa9.6□□□□□ -0.87
LINC00616-205ENST00000514600 RAD21O60216 631 aa9.58□□□□□ -0.88
LINC00616-205ENST00000514600 ARID3CA6NKF2 412 aa9.58□□□□□ -0.88
LINC00616-205ENST00000514600 RGS22Q8NE09 1264 aa9.58□□□□□ -0.88
LINC00616-205ENST00000514600 RBM42Q9BTD8 480 aaKnown RBP9.58□□□□□ -0.88
LINC00616-205ENST00000514600 CHRDL2Q6WN34 429 aa9.57□□□□□ -0.88
LINC00616-205ENST00000514600 ZNF428Q96B54 188 aa9.57□□□□□ -0.88
LINC00616-205ENST00000514600 ZBTB12Q9Y330 459 aaPredicted RBP9.56□□□□□ -0.88
LINC00616-205ENST00000514600 PLSCR2Q9NRY7 297 aa9.56□□□□□ -0.88
LINC00616-205ENST00000514600 BCL11AQ9H165 835 aa9.55□□□□□ -0.88
LINC00616-205ENST00000514600 PDE4CQ08493 712 aa9.54□□□□□ -0.88
LINC00616-205ENST00000514600 LMOD2Q6P5Q4 547 aa9.53□□□□□ -0.88
LINC00616-205ENST00000514600 ZNF692Q9BU19 519 aaPredicted RBP9.53□□□□□ -0.88
LINC00616-205ENST00000514600 MTMR7Q9Y216 660 aa9.53□□□□□ -0.88
LINC00616-205ENST00000514600 FAM9AQ8IZU1 332 aaPredicted RBP9.53□□□□□ -0.88
LINC00616-205ENST00000514600 CHGAP10645 457 aaKnown RBP9.51□□□□□ -0.89
LINC00616-205ENST00000514600 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.51□□□□□ -0.89
LINC00616-205ENST00000514600 APBB1O00213 710 aa9.5□□□□□ -0.89
LINC00616-205ENST00000514600 TAF7LQ5H9L4 462 aa9.49□□□□□ -0.89
LINC00616-205ENST00000514600 RBM25P49756 843 aaKnown RBP9.49□□□□□ -0.89
LINC00616-205ENST00000514600 POLR3GLQ9BT43 218 aa9.49□□□□□ -0.89
LINC00616-205ENST00000514600 FOXD4L5Q5VV16 416 aaPredicted RBP9.47□□□□□ -0.89
LINC00616-205ENST00000514600 FOXD4L4Q8WXT5 416 aaPredicted RBP9.47□□□□□ -0.89
LINC00616-205ENST00000514600 PABPN1Q86U42 306 aaKnown RBP eCLIP9.45□□□□□ -0.9
LINC00616-205ENST00000514600 SSUH2Q9Y2M2 353 aa9.43□□□□□ -0.9
LINC00616-205ENST00000514600 SPDYE2BA6NHP3 402 aa9.42□□□□□ -0.9
LINC00616-205ENST00000514600 SPDYE6P0CI01 402 aa9.42□□□□□ -0.9
LINC00616-205ENST00000514600 SPDYE2Q495Y8 402 aa9.42□□□□□ -0.9
LINC00616-205ENST00000514600 SLC24A3Q9HC58 644 aa9.42□□□□□ -0.9
LINC00616-205ENST00000514600 AEBP1Q8IUX7 1158 aa9.36□□□□□ -0.91
LINC00616-205ENST00000514600 MFAP1P55081 439 aaKnown RBP9.36□□□□□ -0.91
LINC00616-205ENST00000514600 TMCO4Q5TGY1 634 aa9.36□□□□□ -0.91
LINC00616-205ENST00000514600 ZC3H15Q8WU90 426 aaKnown RBP9.36□□□□□ -0.91
LINC00616-205ENST00000514600 USP35Q9P2H5 1018 aa9.36□□□□□ -0.91
LINC00616-205ENST00000514600 CCDC82Q8N4S0 544 aa9.35□□□□□ -0.91
LINC00616-205ENST00000514600 FAM177A1Q8N128 213 aaPredicted RBP9.34□□□□□ -0.91
LINC00616-205ENST00000514600 SPOCK2Q92563 424 aa9.34□□□□□ -0.91
LINC00616-205ENST00000514600 TRAIPQ9BWF2 469 aa9.34□□□□□ -0.91
LINC00616-205ENST00000514600 NEFLP07196 543 aa9.33□□□□□ -0.92
LINC00616-205ENST00000514600 PLCD3Q8N3E9 789 aa9.33□□□□□ -0.92
LINC00616-205ENST00000514600 MIER1Q8N108 512 aa9.32□□□□□ -0.92
LINC00616-205ENST00000514600 E9PSI1 815 aa9.31□□□□□ -0.92
LINC00616-205ENST00000514600 MKRN3Q13064 507 aaKnown RBP9.3□□□□□ -0.92
LINC00616-205ENST00000514600 GZF1Q9H116 711 aaPredicted RBP9.28□□□□□ -0.92
LINC00616-205ENST00000514600 STAG3Q9UJ98 1225 aa9.28□□□□□ -0.92
LINC00616-205ENST00000514600 BCCIPQ9P287 314 aaKnown RBP eCLIP9.27□□□□□ -0.92
LINC00616-205ENST00000514600 NKX1-1Q15270 411 aaPredicted RBP9.26□□□□□ -0.93
LINC00616-205ENST00000514600 IL27Q8NEV9 243 aa9.26□□□□□ -0.93
LINC00616-205ENST00000514600 HAX1O00165 279 aa9.26□□□□□ -0.93
LINC00616-205ENST00000514600 HS6ST3Q8IZP7 471 aa9.26□□□□□ -0.93
LINC00616-205ENST00000514600 BCL11BQ9C0K0 894 aaPredicted RBP9.26□□□□□ -0.93
LINC00616-205ENST00000514600 CWC22Q9HCG8 908 aaKnown RBP9.25□□□□□ -0.93
LINC00616-205ENST00000514600 P3H3Q8IVL6 736 aa9.24□□□□□ -0.93
LINC00616-205ENST00000514600 GTPBP6O43824 516 aaPredicted RBP9.24□□□□□ -0.93
LINC00616-205ENST00000514600 GPBP1L1Q9HC44 474 aaPredicted RBP9.24□□□□□ -0.93
LINC00616-205ENST00000514600 LHX8Q68G74 356 aa9.23□□□□□ -0.93
LINC00616-205ENST00000514600 RSPH4AQ5TD94 716 aa9.22□□□□□ -0.93
LINC00616-205ENST00000514600 BRPF3Q9ULD4 1205 aa9.22□□□□□ -0.93
LINC00616-205ENST00000514600 KCNV2Q8TDN2 545 aa9.21□□□□□ -0.93
LINC00616-205ENST00000514600 PPM1GO15355 546 aaPredicted RBP9.21□□□□□ -0.94
LINC00616-205ENST00000514600 ZFP91Q96JP5 570 aaPredicted RBP9.21□□□□□ -0.94
LINC00616-205ENST00000514600 CERS3Q8IU89 383 aa9.2□□□□□ -0.94
LINC00616-205ENST00000514600 ZNF592Q92610 1267 aa9.2□□□□□ -0.94
LINC00616-205ENST00000514600 WDR70Q9NW82 654 aa9.19□□□□□ -0.94
LINC00616-205ENST00000514600 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.18□□□□□ -0.94
LINC00616-205ENST00000514600 TICAM2Q86XR7 235 aa9.17□□□□□ -0.94
LINC00616-205ENST00000514600 CIZ1Q9ULV3 898 aaPredicted RBP9.17□□□□□ -0.94
LINC00616-205ENST00000514600 IRX6P78412 446 aaPredicted RBP9.15□□□□□ -0.94
LINC00616-205ENST00000514600 CLEC11AQ9Y240 323 aa9.15□□□□□ -0.94
LINC00616-205ENST00000514600 TMED8Q6PL24 325 aaPredicted RBP9.14□□□□□ -0.95
LINC00616-205ENST00000514600 PSMD1Q99460 953 aa9.14□□□□□ -0.95
LINC00616-205ENST00000514600 ZMYND10O75800 440 aa9.12□□□□□ -0.95
LINC00616-205ENST00000514600 PKNOX2Q96KN3 472 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms