RNA–Protein interactions for RNA: ENST00000514600.5

LINC00616-205, long intergenic non-protein coding RNA 616, humanhuman

TSL 1 (best) BASIC

Gene LINC00616, Length 2,017 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00616-205ENST00000514600 AEBP2Q6ZN18 517 aaPredicted RBP16.48■□□□□ 0.23
LINC00616-205ENST00000514600 CHIC1Q5VXU3 224 aa16.31■□□□□ 0.2
LINC00616-205ENST00000514600 PHF23Q9BUL5 403 aaPredicted RBP14.51□□□□□ -0.09
LINC00616-205ENST00000514600 POTEDQ86YR6 584 aa14.29□□□□□ -0.12
LINC00616-205ENST00000514600 SENP3Q9H4L4 574 aaPredicted RBP14.15□□□□□ -0.14
LINC00616-205ENST00000514600 SLC24A1O60721 1099 aa13.59□□□□□ -0.23
LINC00616-205ENST00000514600 PLPPR3Q6T4P5 718 aa13.37□□□□□ -0.27
LINC00616-205ENST00000514600 FOXD1Q16676 465 aa13.06□□□□□ -0.32
LINC00616-205ENST00000514600 MSH5O43196 834 aa12.98□□□□□ -0.33
LINC00616-205ENST00000514600 EHMT2Q96KQ7 1210 aa12.88□□□□□ -0.35
LINC00616-205ENST00000514600 ADRA2BP18089 450 aa12.75□□□□□ -0.37
LINC00616-205ENST00000514600 PPP6R1Q9UPN7 881 aa12.74□□□□□ -0.37
LINC00616-205ENST00000514600 RTN4Q9NQC3 1192 aaKnown RBP12.37□□□□□ -0.43
LINC00616-205ENST00000514600 PIAS4Q8N2W9 510 aaPredicted RBP12.18□□□□□ -0.46
LINC00616-205ENST00000514600 DAXXQ9UER7 740 aaPredicted RBP12.18□□□□□ -0.46
LINC00616-205ENST00000514600 NCBP3Q53F19 620 aaKnown RBP12.15□□□□□ -0.46
LINC00616-205ENST00000514600 KCNA4P22459 653 aa12.14□□□□□ -0.47
LINC00616-205ENST00000514600 AMER1Q5JTC6 1135 aaPredicted RBP12.11□□□□□ -0.47
LINC00616-205ENST00000514600 CSRNP3Q8WYN3 585 aa12.06□□□□□ -0.48
LINC00616-205ENST00000514600 PPP4R3CPQ6ZMV5 832 aa11.9□□□□□ -0.5
LINC00616-205ENST00000514600 PRKCSHP14314 528 aaPredicted RBP11.77□□□□□ -0.53
LINC00616-205ENST00000514600 CACNB1Q02641 598 aaPredicted RBP11.71□□□□□ -0.53
LINC00616-205ENST00000514600 ARXQ96QS3 562 aa11.59□□□□□ -0.55
LINC00616-205ENST00000514600 NPM3O75607 178 aaKnown RBP11.55□□□□□ -0.56
LINC00616-205ENST00000514600 SLC4A1APQ9BWU0 796 aaKnown RBP11.54□□□□□ -0.56
LINC00616-205ENST00000514600 TIMELESSQ9UNS1 1208 aa11.5□□□□□ -0.57
LINC00616-205ENST00000514600 MAPK8IP2Q13387 824 aaPredicted RBP11.48□□□□□ -0.57
LINC00616-205ENST00000514600 TAOK2Q9UL54 1235 aa11.43□□□□□ -0.58
LINC00616-205ENST00000514600 CNKSR2Q8WXI2 1034 aa11.4□□□□□ -0.58
LINC00616-205ENST00000514600 SCAF1Q9H7N4 1312 aaKnown RBP11.38□□□□□ -0.59
LINC00616-205ENST00000514600 APLP2Q06481 763 aa11.36□□□□□ -0.59
LINC00616-205ENST00000514600 TULP1O00294 542 aaPredicted RBP11.33□□□□□ -0.6
LINC00616-205ENST00000514600 BCANQ96GW7 911 aa11.31□□□□□ -0.6
LINC00616-205ENST00000514600 TTBK1Q5TCY1 1321 aaPredicted RBP11.31□□□□□ -0.6
LINC00616-205ENST00000514600 PELP1Q8IZL8 1130 aaKnown RBP11.25□□□□□ -0.61
LINC00616-205ENST00000514600 ZBTB22O15209 634 aa11.23□□□□□ -0.61
LINC00616-205ENST00000514600 TPRNQ4KMQ1 711 aa11.22□□□□□ -0.61
LINC00616-205ENST00000514600 HOMEZQ8IX15 550 aa11.21□□□□□ -0.62
LINC00616-205ENST00000514600 PLCB2Q00722 1185 aa11.16□□□□□ -0.62
LINC00616-205ENST00000514600 RANGAP1P46060 587 aaPredicted RBP11.15□□□□□ -0.62
LINC00616-205ENST00000514600 ERICH6Q7L0X2 663 aa11.13□□□□□ -0.63
LINC00616-205ENST00000514600 MYT1Q01538 1121 aa11.11□□□□□ -0.63
LINC00616-205ENST00000514600 RNF216Q9NWF9 866 aaPredicted RBP11.08□□□□□ -0.64
LINC00616-205ENST00000514600 DMRT2Q9Y5R5 561 aa11.04□□□□□ -0.64
LINC00616-205ENST00000514600 POTEHQ6S545 545 aa11.04□□□□□ -0.64
LINC00616-205ENST00000514600 GTF3C3Q9Y5Q9 886 aa11.02□□□□□ -0.64
LINC00616-205ENST00000514600 HAP1P54257 671 aaPredicted RBP11.02□□□□□ -0.65
LINC00616-205ENST00000514600 HOXD11P31277 338 aaPredicted RBP10.95□□□□□ -0.66
LINC00616-205ENST00000514600 KLHL34Q8N239 644 aa10.95□□□□□ -0.66
LINC00616-205ENST00000514600 PODXL2Q9NZ53 605 aa10.95□□□□□ -0.66
LINC00616-205ENST00000514600 FOXD4L1Q9NU39 408 aa10.93□□□□□ -0.66
LINC00616-205ENST00000514600 DNAJC5BQ9UF47 199 aa10.91□□□□□ -0.66
LINC00616-205ENST00000514600 SLC4A2P04920 1241 aa10.85□□□□□ -0.67
LINC00616-205ENST00000514600 VSIG10Q8N0Z9 540 aa10.8□□□□□ -0.68
LINC00616-205ENST00000514600 RNF39Q9H2S5 420 aa10.78□□□□□ -0.68
LINC00616-205ENST00000514600 TMEM132AQ24JP5 1023 aa10.77□□□□□ -0.68
LINC00616-205ENST00000514600 FKBP8Q14318 412 aa10.77□□□□□ -0.69
LINC00616-205ENST00000514600 C1QBPQ07021 282 aaKnown RBP10.72□□□□□ -0.69
LINC00616-205ENST00000514600 NPM2Q86SE8 214 aaKnown RBP10.7□□□□□ -0.7
LINC00616-205ENST00000514600 DCAF8L1A6NGE4 600 aa10.68□□□□□ -0.7
LINC00616-205ENST00000514600 KDM2AQ9Y2K7 1162 aa10.68□□□□□ -0.7
LINC00616-205ENST00000514600 C14orf37Q86TY3 774 aa10.67□□□□□ -0.7
LINC00616-205ENST00000514600 EIF5BO60841 1220 aaKnown RBP10.63□□□□□ -0.71
LINC00616-205ENST00000514600 FBLN2P98095 1184 aa10.57□□□□□ -0.72
LINC00616-205ENST00000514600 MYCNP04198 464 aaPredicted RBP10.56□□□□□ -0.72
LINC00616-205ENST00000514600 FBXO3Q9UK99 471 aa10.56□□□□□ -0.72
LINC00616-205ENST00000514600 TRIM26Q12899 539 aaPredicted RBP10.52□□□□□ -0.73
LINC00616-205ENST00000514600 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.49□□□□□ -0.73
LINC00616-205ENST00000514600 SUPT5HO00267 1087 aaKnown RBP10.48□□□□□ -0.73
LINC00616-205ENST00000514600 ATF5Q9Y2D1 282 aaPredicted RBP10.47□□□□□ -0.73
LINC00616-205ENST00000514600 DCAF8L2P0C7V8 631 aa10.41□□□□□ -0.74
LINC00616-205ENST00000514600 U3KPZ7 1027 aaPredicted RBP10.41□□□□□ -0.74
LINC00616-205ENST00000514600 ATXN8OSP0DMR3 200 aa10.4□□□□□ -0.74
LINC00616-205ENST00000514600 UBTFP17480 764 aaKnown RBP10.4□□□□□ -0.74
LINC00616-205ENST00000514600 HRCP23327 699 aa10.4□□□□□ -0.74
LINC00616-205ENST00000514600 LOC105371045A0A1W2PR82 267 aa10.31□□□□□ -0.76
LINC00616-205ENST00000514600 PLEKHG5O94827 1062 aa10.25□□□□□ -0.77
LINC00616-205ENST00000514600 SAMD1Q6SPF0 538 aaPredicted RBP10.23□□□□□ -0.77
LINC00616-205ENST00000514600 NBR1Q14596 966 aa10.21□□□□□ -0.78
LINC00616-205ENST00000514600 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.19□□□□□ -0.78
LINC00616-205ENST00000514600 HNRNPUL2Q1KMD3 747 aaKnown RBP10.19□□□□□ -0.78
LINC00616-205ENST00000514600 PAXIP1Q6ZW49 1069 aaPredicted RBP10.19□□□□□ -0.78
LINC00616-205ENST00000514600 CFAP44Q96MT7 982 aa10.16□□□□□ -0.78
LINC00616-205ENST00000514600 TSHZ2Q9NRE2 1034 aa10.16□□□□□ -0.78
LINC00616-205ENST00000514600 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.13□□□□□ -0.79
LINC00616-205ENST00000514600 ZNF219Q9P2Y4 722 aaPredicted RBP10.11□□□□□ -0.79
LINC00616-205ENST00000514600 BBXQ8WY36 941 aaPredicted RBP10.1□□□□□ -0.79
LINC00616-205ENST00000514600 SPINK5Q9NQ38 1064 aaPredicted RBP10.08□□□□□ -0.8
LINC00616-205ENST00000514600 NPM1P06748 294 aaKnown RBP eCLIP10.05□□□□□ -0.8
LINC00616-205ENST00000514600 PKD2Q13563 968 aa10.05□□□□□ -0.8
LINC00616-205ENST00000514600 TRHP20396 242 aaPredicted RBP10.03□□□□□ -0.8
LINC00616-205ENST00000514600 CCDC9Q9Y3X0 531 aaKnown RBP9.99□□□□□ -0.81
LINC00616-205ENST00000514600 IGSF3O75054 1194 aa9.97□□□□□ -0.81
LINC00616-205ENST00000514600 SHROOM4Q9ULL8 1493 aa9.97□□□□□ -0.81
LINC00616-205ENST00000514600 MKRN4PQ13434 485 aaPredicted RBP9.97□□□□□ -0.81
LINC00616-205ENST00000514600 DNAJC5Q9H3Z4 198 aa9.96□□□□□ -0.81
LINC00616-205ENST00000514600 CAPN15O75808 1086 aa9.94□□□□□ -0.82
LINC00616-205ENST00000514600 CHMP4AQ9BY43 222 aa9.94□□□□□ -0.82
LINC00616-205ENST00000514600 POLA2Q14181 598 aa9.93□□□□□ -0.82
LINC00616-205ENST00000514600 CDK11BP21127 795 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms