RNA–Protein interactions for RNA: ENST00000514387.6

GPBP1-208, Transcript of GC-rich promoter binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPBP1, Length 3,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPBP1-208ENST00000514387 AAMPQ13685 434 aa12.26□□□□□ -0.45
GPBP1-208ENST00000514387 CCDC136Q96JN2 1154 aa12.26□□□□□ -0.45
GPBP1-208ENST00000514387 RRBP1Q9P2E9 1410 aaKnown RBP12.23□□□□□ -0.45
GPBP1-208ENST00000514387 RSPH6AQ9H0K4 717 aa12.22□□□□□ -0.45
GPBP1-208ENST00000514387 SMARCA2P51531 1590 aa12.21□□□□□ -0.46
GPBP1-208ENST00000514387 PLPPR3Q6T4P5 718 aa12.17□□□□□ -0.46
GPBP1-208ENST00000514387 PPP1R15AO75807 674 aaPredicted RBP12.16□□□□□ -0.46
GPBP1-208ENST00000514387 RUSC2Q8N2Y8 1516 aa12.14□□□□□ -0.47
GPBP1-208ENST00000514387 ZMYND15Q9H091 742 aa12.14□□□□□ -0.47
GPBP1-208ENST00000514387 PPP4R2Q9NY27 417 aa12.14□□□□□ -0.47
GPBP1-208ENST00000514387 ANP32CO43423 234 aa12.14□□□□□ -0.47
GPBP1-208ENST00000514387 GLIPR1L2Q4G1C9 344 aa12.14□□□□□ -0.47
GPBP1-208ENST00000514387 RSPH4AQ5TD94 716 aa12.14□□□□□ -0.47
GPBP1-208ENST00000514387 BCL11BQ9C0K0 894 aaPredicted RBP12.14□□□□□ -0.47
GPBP1-208ENST00000514387 NOP58Q9Y2X3 529 aaKnown RBP12.13□□□□□ -0.47
GPBP1-208ENST00000514387 KCNH8Q96L42 1107 aa12.12□□□□□ -0.47
GPBP1-208ENST00000514387 ITGAEP38570 1179 aa12.09□□□□□ -0.47
GPBP1-208ENST00000514387 MAPKBP1O60336 1514 aa12.08□□□□□ -0.48
GPBP1-208ENST00000514387 ERICH3Q5RHP9 1530 aa12.08□□□□□ -0.48
GPBP1-208ENST00000514387 RBM10P98175 930 aaKnown RBP12.07□□□□□ -0.48
GPBP1-208ENST00000514387 RTL5Q5HYW3 569 aaPredicted RBP12.07□□□□□ -0.48
GPBP1-208ENST00000514387 C11orf95C9JLR9 678 aaPredicted RBP12.06□□□□□ -0.48
GPBP1-208ENST00000514387 SYNJ1O43426 1573 aa12.06□□□□□ -0.48
GPBP1-208ENST00000514387 SMARCA4P51532 1647 aa12.06□□□□□ -0.48
GPBP1-208ENST00000514387 CCNB3Q8WWL7 1395 aa12.06□□□□□ -0.48
GPBP1-208ENST00000514387 DDX10Q13206 875 aaKnown RBP12.05□□□□□ -0.48
GPBP1-208ENST00000514387 USP35Q9P2H5 1018 aa12.05□□□□□ -0.48
GPBP1-208ENST00000514387 BRD2P25440 801 aaKnown RBP12.04□□□□□ -0.48
GPBP1-208ENST00000514387 MAP3K1Q13233 1512 aa12.04□□□□□ -0.48
GPBP1-208ENST00000514387 WDR97A6NE52 1622 aa12.02□□□□□ -0.49
GPBP1-208ENST00000514387 AMER1Q5JTC6 1135 aaPredicted RBP12.02□□□□□ -0.49
GPBP1-208ENST00000514387 TULP1O00294 542 aaPredicted RBP12.01□□□□□ -0.49
GPBP1-208ENST00000514387 WASHC2AQ641Q2 1341 aa12.01□□□□□ -0.49
GPBP1-208ENST00000514387 ZBTB4Q9P1Z0 1013 aaPredicted RBP12□□□□□ -0.49
GPBP1-208ENST00000514387 ARAP1Q96P48 1450 aa12□□□□□ -0.49
GPBP1-208ENST00000514387 TRIM52Q96A61 297 aa12□□□□□ -0.49
GPBP1-208ENST00000514387 SETD5Q9C0A6 1442 aa12□□□□□ -0.49
GPBP1-208ENST00000514387 RAPGEF2Q9Y4G8 1499 aa12□□□□□ -0.49
GPBP1-208ENST00000514387 ZNF326Q5BKZ1 582 aaKnown RBP11.99□□□□□ -0.49
GPBP1-208ENST00000514387 IPO9Q96P70 1041 aaKnown RBP11.99□□□□□ -0.49
GPBP1-208ENST00000514387 ANP32AP39687 249 aaKnown RBP11.99□□□□□ -0.49
GPBP1-208ENST00000514387 RAB3GAP2Q9H2M9 1393 aa11.99□□□□□ -0.49
GPBP1-208ENST00000514387 AEBP2Q6ZN18 517 aaPredicted RBP11.97□□□□□ -0.49
GPBP1-208ENST00000514387 WASHC2CQ9Y4E1 1318 aa11.95□□□□□ -0.5
GPBP1-208ENST00000514387 ZBTB47Q9UFB7 747 aaPredicted RBP11.94□□□□□ -0.5
GPBP1-208ENST00000514387 NPM2Q86SE8 214 aaKnown RBP11.93□□□□□ -0.5
GPBP1-208ENST00000514387 PRXQ9BXM0 1461 aa11.93□□□□□ -0.5
GPBP1-208ENST00000514387 NCAPD3P42695 1498 aa11.92□□□□□ -0.5
GPBP1-208ENST00000514387 IL27Q8NEV9 243 aa11.92□□□□□ -0.5
GPBP1-208ENST00000514387 CHMP4AQ9BY43 222 aa11.92□□□□□ -0.5
GPBP1-208ENST00000514387 FBXO3Q9UK99 471 aa11.92□□□□□ -0.5
GPBP1-208ENST00000514387 HNRNPUQ00839 825 aaKnown RBP eCLIP11.92□□□□□ -0.5
GPBP1-208ENST00000514387 PEG3Q9GZU2 1588 aa11.91□□□□□ -0.5
GPBP1-208ENST00000514387 NBR1Q14596 966 aa11.91□□□□□ -0.5
GPBP1-208ENST00000514387 FHAD1B1AJZ9 1412 aa11.91□□□□□ -0.5
GPBP1-208ENST00000514387 PPM1GO15355 546 aaPredicted RBP11.9□□□□□ -0.5
GPBP1-208ENST00000514387 SAMD1Q6SPF0 538 aaPredicted RBP11.9□□□□□ -0.5
GPBP1-208ENST00000514387 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.9□□□□□ -0.51e-6■□□□□ 8.8
GPBP1-208ENST00000514387 CNKSR2Q8WXI2 1034 aa11.9□□□□□ -0.5
GPBP1-208ENST00000514387 PAK3O75914 559 aaPredicted RBP11.89□□□□□ -0.51
GPBP1-208ENST00000514387 KANK4Q5T7N3 995 aaPredicted RBP11.89□□□□□ -0.51
GPBP1-208ENST00000514387 ZBED9Q6R2W3 1325 aa11.89□□□□□ -0.51
GPBP1-208ENST00000514387 TOP2BQ02880 1626 aa11.88□□□□□ -0.51
GPBP1-208ENST00000514387 A0A0U1RQG5 324 aaPredicted RBP11.86□□□□□ -0.51
GPBP1-208ENST00000514387 VSIG10Q8N0Z9 540 aa11.86□□□□□ -0.51
GPBP1-208ENST00000514387 BIVM-ERCC5R4GMW8 1640 aa11.85□□□□□ -0.51
GPBP1-208ENST00000514387 RNF123Q5XPI4 1314 aa11.84□□□□□ -0.51
GPBP1-208ENST00000514387 NCOA2Q15596 1464 aa11.84□□□□□ -0.51
GPBP1-208ENST00000514387 TIAM1Q13009 1591 aa11.84□□□□□ -0.51
GPBP1-208ENST00000514387 CHRM1P11229 460 aaPredicted RBP11.84□□□□□ -0.51
GPBP1-208ENST00000514387 SMG6Q86US8 1419 aaKnown RBP11.83□□□□□ -0.52
GPBP1-208ENST00000514387 BCCIPQ9P287 314 aaKnown RBP eCLIP11.83□□□□□ -0.52
GPBP1-208ENST00000514387 TONSLQ96HA7 1378 aa11.81□□□□□ -0.52
GPBP1-208ENST00000514387 B4GALNT3Q6L9W6 998 aa11.8□□□□□ -0.52
GPBP1-208ENST00000514387 IRX6P78412 446 aaPredicted RBP11.8□□□□□ -0.52
GPBP1-208ENST00000514387 CNTLNQ9NXG0 1405 aa11.79□□□□□ -0.52
GPBP1-208ENST00000514387 ARHGAP35Q9NRY4 1499 aa11.78□□□□□ -0.52
GPBP1-208ENST00000514387 TCERG1O14776 1098 aaKnown RBP11.78□□□□□ -0.52
GPBP1-208ENST00000514387 SIN3AQ96ST3 1273 aa11.78□□□□□ -0.52
GPBP1-208ENST00000514387 MS4A1P11836 297 aa11.78□□□□□ -0.52
GPBP1-208ENST00000514387 RRP9O43818 475 aaKnown RBP11.77□□□□□ -0.52
GPBP1-208ENST00000514387 TAOK2Q9UL54 1235 aa11.77□□□□□ -0.52
GPBP1-208ENST00000514387 LRRC9Q6ZRR7 1453 aa11.77□□□□□ -0.53
GPBP1-208ENST00000514387 IPO4Q8TEX9 1081 aaKnown RBP11.77□□□□□ -0.53
GPBP1-208ENST00000514387 DDRGK1Q96HY6 314 aa11.76□□□□□ -0.53
GPBP1-208ENST00000514387 CENPJQ9HC77 1338 aaPredicted RBP11.76□□□□□ -0.53
GPBP1-208ENST00000514387 FAM43AQ8N2R8 423 aa11.76□□□□□ -0.53
GPBP1-208ENST00000514387 CFAP43Q8NDM7 1665 aa11.75□□□□□ -0.53
GPBP1-208ENST00000514387 NEFMP07197 916 aa11.75□□□□□ -0.53
GPBP1-208ENST00000514387 DHX37Q8IY37 1157 aaKnown RBP11.75□□□□□ -0.53
GPBP1-208ENST00000514387 PRDM4Q9UKN5 801 aa11.75□□□□□ -0.53
GPBP1-208ENST00000514387 GSE1Q14687 1217 aa11.74□□□□□ -0.53
GPBP1-208ENST00000514387 UACAQ9BZF9 1416 aa11.74□□□□□ -0.53
GPBP1-208ENST00000514387 NAP1L5Q96NT1 182 aaPredicted RBP11.73□□□□□ -0.53
GPBP1-208ENST00000514387 NAP1L2Q9ULW6 460 aaPredicted RBP11.73□□□□□ -0.53
GPBP1-208ENST00000514387 ABCA5Q8WWZ7 1642 aa11.72□□□□□ -0.53
GPBP1-208ENST00000514387 HSP90B1P14625 803 aaKnown RBP11.72□□□□□ -0.53
GPBP1-208ENST00000514387 NUDCQ9Y266 331 aa11.72□□□□□ -0.53
GPBP1-208ENST00000514387 PAXIP1Q6ZW49 1069 aaPredicted RBP11.71□□□□□ -0.53
GPBP1-208ENST00000514387 KIF27Q86VH2 1401 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms