RNA–Protein interactions for RNA: ENST00000512744.5

PLXND1-214, Transcript of plexin D1, humanhuman

TSL 1 (best)

Gene PLXND1, Length 2,662 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXND1-214ENST00000512744 CADPSQ9ULU8 1353 aa24.08■■□□□ 1.45
PLXND1-214ENST00000512744 TIAM1Q13009 1591 aa24.05■■□□□ 1.44
PLXND1-214ENST00000512744 SUPT16HQ9Y5B9 1047 aaKnown RBP24.05■■□□□ 1.44
PLXND1-214ENST00000512744 LRRC9Q6ZRR7 1453 aa24.02■■□□□ 1.44
PLXND1-214ENST00000512744 RAD54L2Q9Y4B4 1467 aa24■■□□□ 1.43
PLXND1-214ENST00000512744 FHOD3Q2V2M9 1422 aa23.99■■□□□ 1.43
PLXND1-214ENST00000512744 SETD5Q9C0A6 1442 aa23.98■■□□□ 1.43
PLXND1-214ENST00000512744 DDX10Q13206 875 aaKnown RBP23.98■■□□□ 1.43
PLXND1-214ENST00000512744 WDR97A6NE52 1622 aa23.93■■□□□ 1.42
PLXND1-214ENST00000512744 PCF11O94913 1555 aaKnown RBP23.92■■□□□ 1.42
PLXND1-214ENST00000512744 FANCD2Q9BXW9 1451 aa23.88■■□□□ 1.41
PLXND1-214ENST00000512744 PRDM2Q13029 1718 aa23.88■■□□□ 1.41
PLXND1-214ENST00000512744 NESP48681 1621 aa23.88■■□□□ 1.41
PLXND1-214ENST00000512744 BCANQ96GW7 911 aa23.84■■□□□ 1.41
PLXND1-214ENST00000512744 MAP3K1Q13233 1512 aa23.83■■□□□ 1.41
PLXND1-214ENST00000512744 CC2D2AQ9P2K1 1620 aa23.82■■□□□ 1.4
PLXND1-214ENST00000512744 FHAD1B1AJZ9 1412 aa23.81■■□□□ 1.4
PLXND1-214ENST00000512744 POLA1P09884 1462 aaPredicted RBP23.78■■□□□ 1.4
PLXND1-214ENST00000512744 PPP1R15AO75807 674 aaPredicted RBP23.76■■□□□ 1.39
PLXND1-214ENST00000512744 CFAP43Q8NDM7 1665 aa23.74■■□□□ 1.39
PLXND1-214ENST00000512744 DNAJC5BQ9UF47 199 aa23.73■■□□□ 1.39
PLXND1-214ENST00000512744 TOPBP1Q92547 1522 aa23.73■■□□□ 1.39
PLXND1-214ENST00000512744 PTPRKQ15262 1439 aa23.72■■□□□ 1.39
PLXND1-214ENST00000512744 TDRD9Q8NDG6 1382 aaKnown RBP23.72■■□□□ 1.39
PLXND1-214ENST00000512744 TRIM52Q96A61 297 aa23.7■■□□□ 1.39
PLXND1-214ENST00000512744 TSHZ2Q9NRE2 1034 aa23.7■■□□□ 1.39
PLXND1-214ENST00000512744 ABCA10Q8WWZ4 1543 aa23.69■■□□□ 1.38
PLXND1-214ENST00000512744 CASKIN1Q8WXD9 1431 aa23.69■■□□□ 1.38
PLXND1-214ENST00000512744 DNMBPQ6XZF7 1577 aa23.66■■□□□ 1.38
PLXND1-214ENST00000512744 FYCO1Q9BQS8 1478 aa23.66■■□□□ 1.38
PLXND1-214ENST00000512744 FKBP8Q14318 412 aa23.66■■□□□ 1.38
PLXND1-214ENST00000512744 FGD6Q6ZV73 1430 aa23.64■■□□□ 1.37
PLXND1-214ENST00000512744 MYT1Q01538 1121 aa23.64■■□□□ 1.37
PLXND1-214ENST00000512744 MTUS2Q5JR59 1369 aa23.62■■□□□ 1.37
PLXND1-214ENST00000512744 ARID3CA6NKF2 412 aa23.62■■□□□ 1.37
PLXND1-214ENST00000512744 CHIC2Q9UKJ5 165 aa23.6■■□□□ 1.37
PLXND1-214ENST00000512744 SNAPC4Q5SXM2 1469 aa23.59■■□□□ 1.37
PLXND1-214ENST00000512744 AQRO60306 1485 aaKnown RBP eCLIP23.59■■□□□ 1.372e-7■■■■■ 28.9
PLXND1-214ENST00000512744 URB2Q14146 1524 aaKnown RBP23.58■■□□□ 1.36
PLXND1-214ENST00000512744 CCDC18Q5T9S5 1454 aa23.57■■□□□ 1.36
PLXND1-214ENST00000512744 RRP7BPQ9NSQ0 103 aa23.57■■□□□ 1.36
PLXND1-214ENST00000512744 TONSLQ96HA7 1378 aa23.56■■□□□ 1.36
PLXND1-214ENST00000512744 EFCAB5A4FU69 1503 aa23.55■■□□□ 1.36
PLXND1-214ENST00000512744 FMN1Q68DA7 1419 aa23.53■■□□□ 1.36
PLXND1-214ENST00000512744 LRRIQ1Q96JM4 1722 aa23.53■■□□□ 1.36
PLXND1-214ENST00000512744 ANP32CO43423 234 aa23.52■■□□□ 1.36
PLXND1-214ENST00000512744 CTTNBP2Q8WZ74 1663 aa23.51■■□□□ 1.35
PLXND1-214ENST00000512744 TIMELESSQ9UNS1 1208 aa23.51■■□□□ 1.35
PLXND1-214ENST00000512744 NCOA2Q15596 1464 aa23.51■■□□□ 1.35
PLXND1-214ENST00000512744 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.49■■□□□ 1.35
PLXND1-214ENST00000512744 NAIPQ13075 1403 aa23.49■■□□□ 1.35
PLXND1-214ENST00000512744 CUL7Q14999 1698 aa23.47■■□□□ 1.35
PLXND1-214ENST00000512744 HFM1A2PYH4 1435 aa23.47■■□□□ 1.35
PLXND1-214ENST00000512744 FOXD1Q16676 465 aa23.46■■□□□ 1.35
PLXND1-214ENST00000512744 PTPN23Q9H3S7 1636 aa23.46■■□□□ 1.35
PLXND1-214ENST00000512744 UACAQ9BZF9 1416 aa23.45■■□□□ 1.34
PLXND1-214ENST00000512744 MAGI3Q5TCQ9 1506 aa23.44■■□□□ 1.34
PLXND1-214ENST00000512744 GAPVD1Q14C86 1478 aa23.44■■□□□ 1.34
PLXND1-214ENST00000512744 MYOM3Q5VTT5 1437 aa23.43■■□□□ 1.34
PLXND1-214ENST00000512744 GRIN2BQ13224 1484 aa23.43■■□□□ 1.34
PLXND1-214ENST00000512744 CCER2I3L3R5 266 aa23.4■■□□□ 1.34
PLXND1-214ENST00000512744 SAMD9Q5K651 1589 aa23.39■■□□□ 1.33
PLXND1-214ENST00000512744 KDM5BQ9UGL1 1544 aa23.38■■□□□ 1.33
PLXND1-214ENST00000512744 IRX6P78412 446 aaPredicted RBP23.37■■□□□ 1.33
PLXND1-214ENST00000512744 ABCA5Q8WWZ7 1642 aa23.35■■□□□ 1.33
PLXND1-214ENST00000512744 DENND4BO75064 1496 aaPredicted RBP23.35■■□□□ 1.33
PLXND1-214ENST00000512744 HSPA5P11021 654 aaKnown RBP23.35■■□□□ 1.33
PLXND1-214ENST00000512744 KDM6BO15054 1643 aa23.34■■□□□ 1.33
PLXND1-214ENST00000512744 WASHC2AQ641Q2 1341 aa23.34■■□□□ 1.33
PLXND1-214ENST00000512744 CCDC184Q52MB2 194 aa23.33■■□□□ 1.33
PLXND1-214ENST00000512744 HNRNPUQ00839 825 aaKnown RBP eCLIP23.31■■□□□ 1.32
PLXND1-214ENST00000512744 NEFLP07196 543 aa23.3■■□□□ 1.32
PLXND1-214ENST00000512744 C11orf95C9JLR9 678 aaPredicted RBP23.3■■□□□ 1.32
PLXND1-214ENST00000512744 UGGT2Q9NYU1 1516 aa23.28■■□□□ 1.32
PLXND1-214ENST00000512744 CDK13Q14004 1512 aaKnown RBP23.28■■□□□ 1.32
PLXND1-214ENST00000512744 SUPT6HQ7KZ85 1726 aaKnown RBP23.28■■□□□ 1.32
PLXND1-214ENST00000512744 LAMC3Q9Y6N6 1575 aa23.27■■□□□ 1.32
PLXND1-214ENST00000512744 L3MBTL2Q969R5 705 aa23.26■■□□□ 1.31
PLXND1-214ENST00000512744 EHBP1L1Q8N3D4 1523 aa23.25■■□□□ 1.31
PLXND1-214ENST00000512744 MPHOSPH9Q99550 1183 aa23.25■■□□□ 1.31
PLXND1-214ENST00000512744 ZNF644Q9H582 1327 aaPredicted RBP23.25■■□□□ 1.31
PLXND1-214ENST00000512744 KIF21AQ7Z4S6 1674 aa23.22■■□□□ 1.31
PLXND1-214ENST00000512744 RBM19Q9Y4C8 960 aaKnown RBP23.22■■□□□ 1.31
PLXND1-214ENST00000512744 ARHGEF11O15085 1522 aa23.22■■□□□ 1.31
PLXND1-214ENST00000512744 PDS5BQ9NTI5 1447 aa23.2■■□□□ 1.31
PLXND1-214ENST00000512744 CNGB1Q14028 1251 aaPredicted RBP23.2■■□□□ 1.3
PLXND1-214ENST00000512744 EPRSP07814 1512 aaKnown RBP23.18■■□□□ 1.3
PLXND1-214ENST00000512744 NBPF8Q3BBV2 869 aa23.18■■□□□ 1.3
PLXND1-214ENST00000512744 ANP32EQ9BTT0 268 aa23.17■■□□□ 1.3
PLXND1-214ENST00000512744 TARBP1Q13395 1621 aaKnown RBP23.16■■□□□ 1.3
PLXND1-214ENST00000512744 EIF4G2P78344 907 aaKnown RBP eCLIP23.16■■□□□ 1.3
PLXND1-214ENST00000512744 THOC2Q8NI27 1593 aaKnown RBP23.15■■□□□ 1.3
PLXND1-214ENST00000512744 TCOF1Q13428 1488 aaKnown RBP23.13■■□□□ 1.29
PLXND1-214ENST00000512744 FAM9BQ8IZU0 186 aa23.12■■□□□ 1.29
PLXND1-214ENST00000512744 SENP3-EIF4A1A0A087X0R7 540 aa23.12■■□□□ 1.29
PLXND1-214ENST00000512744 IQGAP2Q13576 1575 aa23.08■■□□□ 1.28
PLXND1-214ENST00000512744 HECW1Q76N89 1606 aa23.07■■□□□ 1.28
PLXND1-214ENST00000512744 ZNF608Q9ULD9 1512 aaPredicted RBP23.06■■□□□ 1.28
PLXND1-214ENST00000512744 GCC2Q8IWJ2 1684 aa23.06■■□□□ 1.28
PLXND1-214ENST00000512744 SLC4A1APQ9BWU0 796 aaKnown RBP23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms