RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 BIVM-ERCC5R4GMW8 1640 aa21.16■□□□□ 0.98
DEPDC1B-206ENST00000512452 FAM9AQ8IZU1 332 aaPredicted RBP21.14■□□□□ 0.97
DEPDC1B-206ENST00000512452 NPM1P06748 294 aaKnown RBP eCLIP21.12■□□□□ 0.97
DEPDC1B-206ENST00000512452 DIP2BQ9P265 1576 aa21.11■□□□□ 0.97
DEPDC1B-206ENST00000512452 CEP170Q5SW79 1584 aa21.1■□□□□ 0.97
DEPDC1B-206ENST00000512452 TSPOAP1O95153 1857 aa21.08■□□□□ 0.97
DEPDC1B-206ENST00000512452 MAPKBP1O60336 1514 aa21.04■□□□□ 0.96
DEPDC1B-206ENST00000512452 CUX1P39880 1505 aa21.02■□□□□ 0.96
DEPDC1B-206ENST00000512452 CSRNP3Q8WYN3 585 aa21.01■□□□□ 0.95
DEPDC1B-206ENST00000512452 FGD5Q6ZNL6 1462 aa20.95■□□□□ 0.94
DEPDC1B-206ENST00000512452 RUSC2Q8N2Y8 1516 aa20.94■□□□□ 0.94
DEPDC1B-206ENST00000512452 KIF21BO75037 1637 aa20.93■□□□□ 0.94
DEPDC1B-206ENST00000512452 SHROOM2Q13796 1616 aa20.93■□□□□ 0.94
DEPDC1B-206ENST00000512452 PBRM1Q86U86 1689 aa20.93■□□□□ 0.94
DEPDC1B-206ENST00000512452 GOLGA3Q08378 1498 aa20.91■□□□□ 0.94
DEPDC1B-206ENST00000512452 GRIN2AQ12879 1464 aa20.9■□□□□ 0.94
DEPDC1B-206ENST00000512452 TNIKQ9UKE5 1360 aa20.9■□□□□ 0.94
DEPDC1B-206ENST00000512452 NUP160Q12769 1436 aa20.89■□□□□ 0.94
DEPDC1B-206ENST00000512452 PRG4Q92954 1404 aaPredicted RBP20.87■□□□□ 0.93
DEPDC1B-206ENST00000512452 KIF27Q86VH2 1401 aa20.82■□□□□ 0.92
DEPDC1B-206ENST00000512452 JPH4Q96JJ6 628 aa20.77■□□□□ 0.92
DEPDC1B-206ENST00000512452 ADCY10Q96PN6 1610 aa20.77■□□□□ 0.92
DEPDC1B-206ENST00000512452 ERICH3Q5RHP9 1530 aa20.77■□□□□ 0.92
DEPDC1B-206ENST00000512452 COL17A1Q9UMD9 1497 aaPredicted RBP20.76■□□□□ 0.91
DEPDC1B-206ENST00000512452 CERKQ8TCT0 537 aa20.75■□□□□ 0.91
DEPDC1B-206ENST00000512452 CEP162Q5TB80 1403 aa20.74■□□□□ 0.91
DEPDC1B-206ENST00000512452 PRXQ9BXM0 1461 aa20.74■□□□□ 0.91
DEPDC1B-206ENST00000512452 SPATA31D1Q6ZQQ2 1576 aa20.73■□□□□ 0.91
DEPDC1B-206ENST00000512452 EHMT2Q96KQ7 1210 aa20.72■□□□□ 0.91
DEPDC1B-206ENST00000512452 PPRC1Q5VV67 1664 aaKnown RBP20.7■□□□□ 0.91
DEPDC1B-206ENST00000512452 UBTFP17480 764 aaKnown RBP20.69■□□□□ 0.9
DEPDC1B-206ENST00000512452 ABCA5Q8WWZ7 1642 aa20.68■□□□□ 0.9
DEPDC1B-206ENST00000512452 RAPGEF2Q9Y4G8 1499 aa20.66■□□□□ 0.9
DEPDC1B-206ENST00000512452 ADAMTS12P58397 1594 aa20.64■□□□□ 0.9
DEPDC1B-206ENST00000512452 ABCA10Q8WWZ4 1543 aa20.63■□□□□ 0.89
DEPDC1B-206ENST00000512452 TRIM26Q12899 539 aaPredicted RBP20.62■□□□□ 0.89
DEPDC1B-206ENST00000512452 FHAD1B1AJZ9 1412 aa20.6■□□□□ 0.89
DEPDC1B-206ENST00000512452 GLI2P10070 1586 aa20.59■□□□□ 0.89
DEPDC1B-206ENST00000512452 IGF1RP08069 1367 aa20.57■□□□□ 0.88
DEPDC1B-206ENST00000512452 CLIP1P30622 1438 aa20.54■□□□□ 0.88
DEPDC1B-206ENST00000512452 PCGF6Q9BYE7 350 aa20.54■□□□□ 0.88
DEPDC1B-206ENST00000512452 PCF11O94913 1555 aaKnown RBP20.51■□□□□ 0.87
DEPDC1B-206ENST00000512452 PTPRMP28827 1452 aa20.51■□□□□ 0.87
DEPDC1B-206ENST00000512452 PLB1Q6P1J6 1458 aa20.51■□□□□ 0.87
DEPDC1B-206ENST00000512452 TEX14Q8IWB6 1497 aa20.51■□□□□ 0.87
DEPDC1B-206ENST00000512452 ASXL2Q76L83 1435 aa20.51■□□□□ 0.87
DEPDC1B-206ENST00000512452 CARMIL1Q5VZK9 1371 aa20.47■□□□□ 0.87
DEPDC1B-206ENST00000512452 CUL7Q14999 1698 aa20.46■□□□□ 0.87
DEPDC1B-206ENST00000512452 VPS8Q8N3P4 1428 aa20.43■□□□□ 0.86
DEPDC1B-206ENST00000512452 HSPA2P54652 639 aa20.42■□□□□ 0.86
DEPDC1B-206ENST00000512452 ABCC2Q92887 1545 aa20.4■□□□□ 0.86
DEPDC1B-206ENST00000512452 MAP3K4Q9Y6R4 1608 aa20.4■□□□□ 0.86
DEPDC1B-206ENST00000512452 EPRSP07814 1512 aaKnown RBP20.36■□□□□ 0.85
DEPDC1B-206ENST00000512452 PTPRGP23470 1445 aa20.36■□□□□ 0.85
DEPDC1B-206ENST00000512452 TTBK1Q5TCY1 1321 aaPredicted RBP20.35■□□□□ 0.85
DEPDC1B-206ENST00000512452 ADAMTSL3P82987 1691 aa20.34■□□□□ 0.85
DEPDC1B-206ENST00000512452 KIAA0586Q9BVV6 1533 aa20.28■□□□□ 0.84
DEPDC1B-206ENST00000512452 ARHGAP35Q9NRY4 1499 aa20.26■□□□□ 0.83
DEPDC1B-206ENST00000512452 HRCP23327 699 aa20.25■□□□□ 0.83
DEPDC1B-206ENST00000512452 CTTNBP2Q8WZ74 1663 aa20.21■□□□□ 0.83
DEPDC1B-206ENST00000512452 EFCAB5A4FU69 1503 aa20.21■□□□□ 0.83
DEPDC1B-206ENST00000512452 APLP2Q06481 763 aa20.2■□□□□ 0.82
DEPDC1B-206ENST00000512452 UHRF1BP1LA0JNW5 1464 aa20.18■□□□□ 0.82
DEPDC1B-206ENST00000512452 MADDQ8WXG6 1647 aa20.16■□□□□ 0.82
DEPDC1B-206ENST00000512452 ARID4BQ4LE39 1312 aaPredicted RBP20.14■□□□□ 0.81
DEPDC1B-206ENST00000512452 PPARGC1BQ86YN6 1023 aaKnown RBP20.14■□□□□ 0.81
DEPDC1B-206ENST00000512452 MAP3K1Q13233 1512 aa20.13■□□□□ 0.81
DEPDC1B-206ENST00000512452 MAGI3Q5TCQ9 1506 aa20.13■□□□□ 0.81
DEPDC1B-206ENST00000512452 PLPPR3Q6T4P5 718 aa20.13■□□□□ 0.81
DEPDC1B-206ENST00000512452 CD109Q6YHK3 1445 aa20.12■□□□□ 0.81
DEPDC1B-206ENST00000512452 UACAQ9BZF9 1416 aa20.12■□□□□ 0.81
DEPDC1B-206ENST00000512452 RANGAP1P46060 587 aaPredicted RBP20.12■□□□□ 0.81
DEPDC1B-206ENST00000512452 BCORL1Q5H9F3 1711 aa20.12■□□□□ 0.81
DEPDC1B-206ENST00000512452 DMRT2Q9Y5R5 561 aa20.1■□□□□ 0.81
DEPDC1B-206ENST00000512452 KDM5BQ9UGL1 1544 aa20.1■□□□□ 0.81
DEPDC1B-206ENST00000512452 CARMIL2Q6F5E8 1435 aa20.07■□□□□ 0.8
DEPDC1B-206ENST00000512452 RIMS1Q86UR5 1692 aaKnown RBP20.06■□□□□ 0.8
DEPDC1B-206ENST00000512452 SAMD9Q5K651 1589 aa20.04■□□□□ 0.8
DEPDC1B-206ENST00000512452 WDR7Q9Y4E6 1490 aa20.03■□□□□ 0.8
DEPDC1B-206ENST00000512452 ARAP3Q8WWN8 1544 aa20.02■□□□□ 0.8
DEPDC1B-206ENST00000512452 ZCCHC11Q5TAX3 1644 aaKnown RBP20.02■□□□□ 0.8
DEPDC1B-206ENST00000512452 ZEB1P37275 1124 aaPredicted RBP20.02■□□□□ 0.8
DEPDC1B-206ENST00000512452 YEATS2Q9ULM3 1422 aa20.02■□□□□ 0.79
DEPDC1B-206ENST00000512452 FMN1Q68DA7 1419 aa20■□□□□ 0.79
DEPDC1B-206ENST00000512452 CFAP43Q8NDM7 1665 aa20■□□□□ 0.79
DEPDC1B-206ENST00000512452 FYCO1Q9BQS8 1478 aa19.99■□□□□ 0.79
DEPDC1B-206ENST00000512452 KCNH8Q96L42 1107 aa19.99■□□□□ 0.79
DEPDC1B-206ENST00000512452 TIAM1Q13009 1591 aa19.97■□□□□ 0.79
DEPDC1B-206ENST00000512452 CASKIN1Q8WXD9 1431 aa19.97■□□□□ 0.79
DEPDC1B-206ENST00000512452 IQGAP2Q13576 1575 aa19.96■□□□□ 0.79
DEPDC1B-206ENST00000512452 IQSEC2Q5JU85 1478 aa19.95■□□□□ 0.78
DEPDC1B-206ENST00000512452 FHOD3Q2V2M9 1422 aa19.94■□□□□ 0.78
DEPDC1B-206ENST00000512452 RAPGEF3O95398 923 aa19.93■□□□□ 0.78
DEPDC1B-206ENST00000512452 UGGT2Q9NYU1 1516 aa19.92■□□□□ 0.78
DEPDC1B-206ENST00000512452 MED1Q15648 1581 aaPredicted RBP19.9■□□□□ 0.78
DEPDC1B-206ENST00000512452 STRCQ7RTU9 1775 aa19.9■□□□□ 0.78
DEPDC1B-206ENST00000512452 UBAP1LF5GYI3 381 aa19.88■□□□□ 0.77
DEPDC1B-206ENST00000512452 KANK4Q5T7N3 995 aaPredicted RBP19.88■□□□□ 0.77
DEPDC1B-206ENST00000512452 LTBP4Q8N2S1 1624 aa19.87■□□□□ 0.77
DEPDC1B-206ENST00000512452 LRRC9Q6ZRR7 1453 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms