RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 ABCA10Q8WWZ4 1543 aa10.37□□□□□ -0.75
RNF4-217ENST00000511892 NPM3O75607 178 aaKnown RBP10.36□□□□□ -0.75
RNF4-217ENST00000511892 GRIN2BQ13224 1484 aa10.36□□□□□ -0.75
RNF4-217ENST00000511892 FBLN2P98095 1184 aa10.35□□□□□ -0.75
RNF4-217ENST00000511892 GAPVD1Q14C86 1478 aa10.35□□□□□ -0.75
RNF4-217ENST00000511892 MAGI1Q96QZ7 1491 aaPredicted RBP10.35□□□□□ -0.75
RNF4-217ENST00000511892 WRNQ14191 1432 aaPredicted RBP eCLIP10.34□□□□□ -0.75
RNF4-217ENST00000511892 CLASP1Q7Z460 1538 aa10.33□□□□□ -0.76
RNF4-217ENST00000511892 SYNJ2O15056 1496 aa10.32□□□□□ -0.76
RNF4-217ENST00000511892 CHMP7Q8WUX9 453 aaPredicted RBP10.3□□□□□ -0.76
RNF4-217ENST00000511892 ARAP1Q96P48 1450 aa10.28□□□□□ -0.76
RNF4-217ENST00000511892 ADAMTS12P58397 1594 aa10.27□□□□□ -0.76
RNF4-217ENST00000511892 CYB5RLQ6IPT4 315 aa10.25□□□□□ -0.77
RNF4-217ENST00000511892 ERICH3Q5RHP9 1530 aa10.24□□□□□ -0.77
RNF4-217ENST00000511892 GRIN2AQ12879 1464 aa10.23□□□□□ -0.77
RNF4-217ENST00000511892 CEP170Q5SW79 1584 aa10.23□□□□□ -0.77
RNF4-217ENST00000511892 FHAD1B1AJZ9 1412 aa10.21□□□□□ -0.78
RNF4-217ENST00000511892 NUP160Q12769 1436 aa10.2□□□□□ -0.78
RNF4-217ENST00000511892 SHROOM2Q13796 1616 aa10.19□□□□□ -0.78
RNF4-217ENST00000511892 ERCC6L2Q5T890 1561 aa10.19□□□□□ -0.78
RNF4-217ENST00000511892 U3KPZ7 1027 aaPredicted RBP10.14□□□□□ -0.79
RNF4-217ENST00000511892 CUL7Q14999 1698 aa10.14□□□□□ -0.79
RNF4-217ENST00000511892 IGF1RP08069 1367 aa10.14□□□□□ -0.79
RNF4-217ENST00000511892 RUSC2Q8N2Y8 1516 aa10.13□□□□□ -0.79
RNF4-217ENST00000511892 KIF27Q86VH2 1401 aa10.13□□□□□ -0.79
RNF4-217ENST00000511892 CAPN15O75808 1086 aa10.1□□□□□ -0.79
RNF4-217ENST00000511892 SPINK5Q9NQ38 1064 aaPredicted RBP10.1□□□□□ -0.79
RNF4-217ENST00000511892 JPH4Q96JJ6 628 aa10.08□□□□□ -0.8
RNF4-217ENST00000511892 PRG4Q92954 1404 aaPredicted RBP10.07□□□□□ -0.8
RNF4-217ENST00000511892 TRHP20396 242 aaPredicted RBP10.07□□□□□ -0.8
RNF4-217ENST00000511892 KCNA4P22459 653 aa10.05□□□□□ -0.8
RNF4-217ENST00000511892 KIAA0586Q9BVV6 1533 aa10.05□□□□□ -0.8
RNF4-217ENST00000511892 CARMIL1Q5VZK9 1371 aa10.04□□□□□ -0.8
RNF4-217ENST00000511892 KIF13AQ9H1H9 1805 aa10.02□□□□□ -0.81
RNF4-217ENST00000511892 ADCY10Q96PN6 1610 aa10□□□□□ -0.81
RNF4-217ENST00000511892 DSG3P32926 999 aa10□□□□□ -0.81
RNF4-217ENST00000511892 IQGAP2Q13576 1575 aa10□□□□□ -0.81
RNF4-217ENST00000511892 RAPGEF2Q9Y4G8 1499 aa9.98□□□□□ -0.81
RNF4-217ENST00000511892 CTTNBP2Q8WZ74 1663 aa9.97□□□□□ -0.81
RNF4-217ENST00000511892 DISP1Q96F81 1524 aa9.94□□□□□ -0.82
RNF4-217ENST00000511892 SLC4A2P04920 1241 aa9.94□□□□□ -0.82
RNF4-217ENST00000511892 MAPKBP1O60336 1514 aa9.93□□□□□ -0.82
RNF4-217ENST00000511892 UGGT2Q9NYU1 1516 aa9.93□□□□□ -0.82
RNF4-217ENST00000511892 PRXQ9BXM0 1461 aa9.92□□□□□ -0.82
RNF4-217ENST00000511892 PTPRGP23470 1445 aa9.92□□□□□ -0.82
RNF4-217ENST00000511892 CARMIL2Q6F5E8 1435 aa9.92□□□□□ -0.82
RNF4-217ENST00000511892 TNIKQ9UKE5 1360 aa9.92□□□□□ -0.82
RNF4-217ENST00000511892 KIAA0556O60303 1618 aa9.91□□□□□ -0.82
RNF4-217ENST00000511892 DIP2BQ9P265 1576 aa9.91□□□□□ -0.82
RNF4-217ENST00000511892 NPM1P06748 294 aaKnown RBP eCLIP9.9□□□□□ -0.82
RNF4-217ENST00000511892 ABCC10Q5T3U5 1492 aa9.9□□□□□ -0.83
RNF4-217ENST00000511892 TSPOAP1O95153 1857 aa9.89□□□□□ -0.83
RNF4-217ENST00000511892 TTBK1Q5TCY1 1321 aaPredicted RBP9.89□□□□□ -0.83
RNF4-217ENST00000511892 ABCB7O75027 752 aa9.89□□□□□ -0.83
RNF4-217ENST00000511892 ABCC2Q92887 1545 aa9.87□□□□□ -0.83
RNF4-217ENST00000511892 UHRF1BP1LA0JNW5 1464 aa9.87□□□□□ -0.83
RNF4-217ENST00000511892 FAM69CQ0P6D2 419 aa9.86□□□□□ -0.83
RNF4-217ENST00000511892 UACAQ9BZF9 1416 aa9.86□□□□□ -0.83
RNF4-217ENST00000511892 ZCCHC11Q5TAX3 1644 aaKnown RBP9.85□□□□□ -0.83
RNF4-217ENST00000511892 POTEHQ6S545 545 aa9.85□□□□□ -0.83
RNF4-217ENST00000511892 CSRNP3Q8WYN3 585 aa9.84□□□□□ -0.83
RNF4-217ENST00000511892 PPRC1Q5VV67 1664 aaKnown RBP9.83□□□□□ -0.84
RNF4-217ENST00000511892 KDM5BQ9UGL1 1544 aa9.83□□□□□ -0.84
RNF4-217ENST00000511892 GOLGA3Q08378 1498 aa9.83□□□□□ -0.84
RNF4-217ENST00000511892 ASXL2Q76L83 1435 aa9.82□□□□□ -0.84
RNF4-217ENST00000511892 ABCA8O94911 1581 aa9.82□□□□□ -0.84
RNF4-217ENST00000511892 EEA1Q15075 1411 aa9.82□□□□□ -0.84
RNF4-217ENST00000511892 GLI2P10070 1586 aa9.81□□□□□ -0.84
RNF4-217ENST00000511892 PLB1Q6P1J6 1458 aa9.81□□□□□ -0.84
RNF4-217ENST00000511892 SAMD9Q5K651 1589 aa9.8□□□□□ -0.84
RNF4-217ENST00000511892 MAP3K4Q9Y6R4 1608 aa9.79□□□□□ -0.84
RNF4-217ENST00000511892 KIF21BO75037 1637 aa9.78□□□□□ -0.84
RNF4-217ENST00000511892 EPRSP07814 1512 aaKnown RBP9.78□□□□□ -0.84
RNF4-217ENST00000511892 FAM9AQ8IZU1 332 aaPredicted RBP9.78□□□□□ -0.84
RNF4-217ENST00000511892 KDM6BO15054 1643 aa9.78□□□□□ -0.84
RNF4-217ENST00000511892 P3H3Q8IVL6 736 aa9.76□□□□□ -0.85
RNF4-217ENST00000511892 WDR7Q9Y4E6 1490 aa9.75□□□□□ -0.85
RNF4-217ENST00000511892 ZNF219Q9P2Y4 722 aaPredicted RBP9.75□□□□□ -0.85
RNF4-217ENST00000511892 APLP2Q06481 763 aa9.74□□□□□ -0.85
RNF4-217ENST00000511892 RAPGEF6Q8TEU7 1601 aa9.74□□□□□ -0.85
RNF4-217ENST00000511892 CFAP43Q8NDM7 1665 aa9.74□□□□□ -0.85
RNF4-217ENST00000511892 ATP10BO94823 1461 aa9.72□□□□□ -0.85
RNF4-217ENST00000511892 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.71□□□□□ -0.86
RNF4-217ENST00000511892 HNRNPUL2Q1KMD3 747 aaKnown RBP9.71□□□□□ -0.86
RNF4-217ENST00000511892 FHOD3Q2V2M9 1422 aa9.71□□□□□ -0.86
RNF4-217ENST00000511892 RANGAP1P46060 587 aaPredicted RBP9.7□□□□□ -0.86
RNF4-217ENST00000511892 COL17A1Q9UMD9 1497 aaPredicted RBP9.7□□□□□ -0.86
RNF4-217ENST00000511892 EFCAB5A4FU69 1503 aa9.7□□□□□ -0.86
RNF4-217ENST00000511892 ARID3CA6NKF2 412 aa9.69□□□□□ -0.86
RNF4-217ENST00000511892 TEX14Q8IWB6 1497 aa9.69□□□□□ -0.86
RNF4-217ENST00000511892 KCNH8Q96L42 1107 aa9.69□□□□□ -0.86
RNF4-217ENST00000511892 NUP153P49790 1475 aaKnown RBP9.68□□□□□ -0.86
RNF4-217ENST00000511892 MAGI3Q5TCQ9 1506 aa9.67□□□□□ -0.86
RNF4-217ENST00000511892 CD109Q6YHK3 1445 aa9.67□□□□□ -0.86
RNF4-217ENST00000511892 SAMD1Q6SPF0 538 aaPredicted RBP9.67□□□□□ -0.86
RNF4-217ENST00000511892 EHMT2Q96KQ7 1210 aa9.67□□□□□ -0.86
RNF4-217ENST00000511892 ABCA9Q8IUA7 1624 aa9.67□□□□□ -0.86
RNF4-217ENST00000511892 UBTFP17480 764 aaKnown RBP9.65□□□□□ -0.86
RNF4-217ENST00000511892 LRRIQ1Q96JM4 1722 aa9.64□□□□□ -0.87
RNF4-217ENST00000511892 KDM4FA0A1W2PPD8 638 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms