RNA–Protein interactions for RNA: ENST00000511782.5

CAST-236, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAST, Length 2,466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-236ENST00000511782 PRDM2Q13029 1718 aa11.9□□□□□ -0.5
CAST-236ENST00000511782 HIRIP3Q9BW71 556 aaPredicted RBP11.9□□□□□ -0.5
CAST-236ENST00000511782 FGD5Q6ZNL6 1462 aa11.9□□□□□ -0.5
CAST-236ENST00000511782 FAM50AQ14320 339 aaKnown RBP11.87□□□□□ -0.51
CAST-236ENST00000511782 SETD5Q9C0A6 1442 aa11.87□□□□□ -0.51
CAST-236ENST00000511782 PCF11O94913 1555 aaKnown RBP11.87□□□□□ -0.51
CAST-236ENST00000511782 DDX10Q13206 875 aaKnown RBP11.86□□□□□ -0.51
CAST-236ENST00000511782 CC2D2AQ9P2K1 1620 aa11.86□□□□□ -0.51
CAST-236ENST00000511782 CADPSQ9ULU8 1353 aa11.85□□□□□ -0.51
CAST-236ENST00000511782 ATP1B4Q9UN42 357 aaPredicted RBP11.85□□□□□ -0.51
CAST-236ENST00000511782 MAP3K1Q13233 1512 aa11.84□□□□□ -0.51
CAST-236ENST00000511782 FHOD3Q2V2M9 1422 aa11.84□□□□□ -0.51
CAST-236ENST00000511782 TSHZ2Q9NRE2 1034 aa11.84□□□□□ -0.51
CAST-236ENST00000511782 RAD54L2Q9Y4B4 1467 aa11.83□□□□□ -0.52
CAST-236ENST00000511782 CFAP43Q8NDM7 1665 aa11.83□□□□□ -0.52
CAST-236ENST00000511782 BCANQ96GW7 911 aa11.81□□□□□ -0.52
CAST-236ENST00000511782 PPP1R15AO75807 674 aaPredicted RBP11.8□□□□□ -0.52
CAST-236ENST00000511782 FHAD1B1AJZ9 1412 aa11.77□□□□□ -0.53
CAST-236ENST00000511782 PTPRKQ15262 1439 aa11.77□□□□□ -0.53
CAST-236ENST00000511782 FANCD2Q9BXW9 1451 aa11.76□□□□□ -0.53
CAST-236ENST00000511782 NESP48681 1621 aa11.75□□□□□ -0.53
CAST-236ENST00000511782 MYT1Q01538 1121 aa11.75□□□□□ -0.53
CAST-236ENST00000511782 TRIM52Q96A61 297 aa11.75□□□□□ -0.53
CAST-236ENST00000511782 LRRIQ1Q96JM4 1722 aa11.75□□□□□ -0.53
CAST-236ENST00000511782 POLA1P09884 1462 aaPredicted RBP11.74□□□□□ -0.53
CAST-236ENST00000511782 FKBP8Q14318 412 aa11.74□□□□□ -0.53
CAST-236ENST00000511782 DNAJC5BQ9UF47 199 aa11.72□□□□□ -0.53
CAST-236ENST00000511782 FYCO1Q9BQS8 1478 aa11.72□□□□□ -0.53
CAST-236ENST00000511782 CASKIN1Q8WXD9 1431 aa11.72□□□□□ -0.53
CAST-236ENST00000511782 ABCA10Q8WWZ4 1543 aa11.71□□□□□ -0.53
CAST-236ENST00000511782 TOPBP1Q92547 1522 aa11.71□□□□□ -0.53
CAST-236ENST00000511782 FGD6Q6ZV73 1430 aa11.71□□□□□ -0.54
CAST-236ENST00000511782 AQRO60306 1485 aaKnown RBP eCLIP11.71□□□□□ -0.542e-6■■■■□ 24.4
CAST-236ENST00000511782 SNAPC4Q5SXM2 1469 aa11.71□□□□□ -0.54
CAST-236ENST00000511782 CTTNBP2Q8WZ74 1663 aa11.7□□□□□ -0.54
CAST-236ENST00000511782 DNMBPQ6XZF7 1577 aa11.69□□□□□ -0.54
CAST-236ENST00000511782 CCDC18Q5T9S5 1454 aa11.68□□□□□ -0.54
CAST-236ENST00000511782 KDM5BQ9UGL1 1544 aa11.68□□□□□ -0.54
CAST-236ENST00000511782 EFCAB5A4FU69 1503 aa11.67□□□□□ -0.54
CAST-236ENST00000511782 PTPN23Q9H3S7 1636 aa11.66□□□□□ -0.54
CAST-236ENST00000511782 TDRD9Q8NDG6 1382 aaKnown RBP11.66□□□□□ -0.54
CAST-236ENST00000511782 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.66□□□□□ -0.54
CAST-236ENST00000511782 NAIPQ13075 1403 aa11.65□□□□□ -0.54
CAST-236ENST00000511782 TIMELESSQ9UNS1 1208 aa11.65□□□□□ -0.54
CAST-236ENST00000511782 HFM1A2PYH4 1435 aa11.64□□□□□ -0.55
CAST-236ENST00000511782 MTUS2Q5JR59 1369 aa11.64□□□□□ -0.55
CAST-236ENST00000511782 CUL7Q14999 1698 aa11.64□□□□□ -0.55
CAST-236ENST00000511782 TONSLQ96HA7 1378 aa11.64□□□□□ -0.55
CAST-236ENST00000511782 URB2Q14146 1524 aaKnown RBP11.63□□□□□ -0.55
CAST-236ENST00000511782 MAGI3Q5TCQ9 1506 aa11.63□□□□□ -0.55
CAST-236ENST00000511782 DENND4BO75064 1496 aaPredicted RBP11.63□□□□□ -0.55
CAST-236ENST00000511782 NCOA2Q15596 1464 aa11.63□□□□□ -0.55
CAST-236ENST00000511782 UACAQ9BZF9 1416 aa11.63□□□□□ -0.55
CAST-236ENST00000511782 ANP32CO43423 234 aa11.63□□□□□ -0.55
CAST-236ENST00000511782 FMN1Q68DA7 1419 aa11.62□□□□□ -0.55
CAST-236ENST00000511782 CCER2I3L3R5 266 aa11.62□□□□□ -0.55
CAST-236ENST00000511782 SAMD9Q5K651 1589 aa11.61□□□□□ -0.55
CAST-236ENST00000511782 KDM6BO15054 1643 aa11.61□□□□□ -0.55
CAST-236ENST00000511782 RRP7BPQ9NSQ0 103 aa11.61□□□□□ -0.55
CAST-236ENST00000511782 CHIC2Q9UKJ5 165 aa11.61□□□□□ -0.55
CAST-236ENST00000511782 GRIN2BQ13224 1484 aa11.6□□□□□ -0.55
CAST-236ENST00000511782 MYOM3Q5VTT5 1437 aa11.6□□□□□ -0.55
CAST-236ENST00000511782 ANP32EQ9BTT0 268 aa11.59□□□□□ -0.55
CAST-236ENST00000511782 IRX6P78412 446 aaPredicted RBP11.58□□□□□ -0.56
CAST-236ENST00000511782 CCDC184Q52MB2 194 aa11.58□□□□□ -0.56
CAST-236ENST00000511782 ABCA5Q8WWZ7 1642 aa11.58□□□□□ -0.56
CAST-236ENST00000511782 WASHC2AQ641Q2 1341 aa11.58□□□□□ -0.56
CAST-236ENST00000511782 RBM19Q9Y4C8 960 aaKnown RBP11.58□□□□□ -0.56
CAST-236ENST00000511782 FOXD1Q16676 465 aa11.57□□□□□ -0.56
CAST-236ENST00000511782 ARID3CA6NKF2 412 aa11.57□□□□□ -0.56
CAST-236ENST00000511782 SUPT6HQ7KZ85 1726 aaKnown RBP11.56□□□□□ -0.56
CAST-236ENST00000511782 GAPVD1Q14C86 1478 aa11.56□□□□□ -0.56
CAST-236ENST00000511782 UGGT2Q9NYU1 1516 aa11.55□□□□□ -0.56
CAST-236ENST00000511782 C11orf95C9JLR9 678 aaPredicted RBP11.55□□□□□ -0.56
CAST-236ENST00000511782 HSPA5P11021 654 aaKnown RBP11.54□□□□□ -0.56
CAST-236ENST00000511782 ARHGEF11O15085 1522 aa11.54□□□□□ -0.56
CAST-236ENST00000511782 HNRNPUQ00839 825 aaKnown RBP eCLIP11.54□□□□□ -0.56
CAST-236ENST00000511782 LAMC3Q9Y6N6 1575 aa11.53□□□□□ -0.56
CAST-236ENST00000511782 NEFLP07196 543 aa11.52□□□□□ -0.56
CAST-236ENST00000511782 EHBP1L1Q8N3D4 1523 aa11.52□□□□□ -0.57
CAST-236ENST00000511782 CDK13Q14004 1512 aaKnown RBP11.51□□□□□ -0.57
CAST-236ENST00000511782 MSH5O43196 834 aa11.5□□□□□ -0.57
CAST-236ENST00000511782 KIF21AQ7Z4S6 1674 aa11.49□□□□□ -0.57
CAST-236ENST00000511782 GCC2Q8IWJ2 1684 aa11.49□□□□□ -0.57
CAST-236ENST00000511782 L3MBTL2Q969R5 705 aa11.49□□□□□ -0.57
CAST-236ENST00000511782 THOC2Q8NI27 1593 aaKnown RBP11.48□□□□□ -0.57
CAST-236ENST00000511782 HECW1Q76N89 1606 aa11.48□□□□□ -0.57
CAST-236ENST00000511782 TARBP1Q13395 1621 aaKnown RBP11.48□□□□□ -0.57
CAST-236ENST00000511782 NBPF8Q3BBV2 869 aa11.47□□□□□ -0.57
CAST-236ENST00000511782 MPHOSPH9Q99550 1183 aa11.47□□□□□ -0.57
CAST-236ENST00000511782 TCOF1Q13428 1488 aaKnown RBP11.47□□□□□ -0.57
CAST-236ENST00000511782 EPRSP07814 1512 aaKnown RBP11.47□□□□□ -0.57
CAST-236ENST00000511782 ZNF644Q9H582 1327 aaPredicted RBP11.46□□□□□ -0.57
CAST-236ENST00000511782 EIF4G2P78344 907 aaKnown RBP eCLIP11.44□□□□□ -0.58
CAST-236ENST00000511782 CNTLNQ9NXG0 1405 aa11.43□□□□□ -0.58
CAST-236ENST00000511782 PRKRIP1Q9H875 184 aaPredicted RBP11.43□□□□□ -0.58
CAST-236ENST00000511782 NCOA1Q15788 1441 aa11.42□□□□□ -0.58
CAST-236ENST00000511782 FAM9BQ8IZU0 186 aa11.42□□□□□ -0.58
CAST-236ENST00000511782 PBRM1Q86U86 1689 aa11.42□□□□□ -0.58
CAST-236ENST00000511782 IQGAP2Q13576 1575 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms