RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 SMARCA4P51532 1647 aa7.75□□□□□ -1.17
USP38-203ENST00000511739 CEP162Q5TB80 1403 aa7.75□□□□□ -1.17
USP38-203ENST00000511739 WIZO95785 1651 aa7.75□□□□□ -1.17
USP38-203ENST00000511739 ARID4BQ4LE39 1312 aaPredicted RBP7.75□□□□□ -1.17
USP38-203ENST00000511739 MYH16Q9H6N6 1097 aa7.74□□□□□ -1.17
USP38-203ENST00000511739 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.74□□□□□ -1.17
USP38-203ENST00000511739 KIF27Q86VH2 1401 aa7.74□□□□□ -1.17
USP38-203ENST00000511739 SALL2Q9Y467 1007 aaPredicted RBP7.73□□□□□ -1.17
USP38-203ENST00000511739 SENP3Q9H4L4 574 aaPredicted RBP7.72□□□□□ -1.17
USP38-203ENST00000511739 WDR43Q15061 677 aaKnown RBP eCLIP7.71□□□□□ -1.17
USP38-203ENST00000511739 NCBP3Q53F19 620 aaKnown RBP7.71□□□□□ -1.18
USP38-203ENST00000511739 EIF5BO60841 1220 aaKnown RBP7.7□□□□□ -1.18
USP38-203ENST00000511739 TSPY4P0CV99 314 aa7.69□□□□□ -1.18
USP38-203ENST00000511739 TSPY10P0CW01 314 aa7.69□□□□□ -1.18
USP38-203ENST00000511739 LMOD2Q6P5Q4 547 aa7.69□□□□□ -1.18
USP38-203ENST00000511739 TONSLQ96HA7 1378 aa7.67□□□□□ -1.18
USP38-203ENST00000511739 ATAD2BQ9ULI0 1458 aa7.67□□□□□ -1.18
USP38-203ENST00000511739 ZRSR1Q15695 479 aaKnown RBP7.67□□□□□ -1.18
USP38-203ENST00000511739 TMC1Q8TDI8 760 aa7.67□□□□□ -1.18
USP38-203ENST00000511739 ACIN1Q9UKV3 1341 aaKnown RBP7.66□□□□□ -1.18
USP38-203ENST00000511739 FAM9BQ8IZU0 186 aa7.66□□□□□ -1.18
USP38-203ENST00000511739 KDM2AQ9Y2K7 1162 aa7.66□□□□□ -1.18
USP38-203ENST00000511739 NCLP19338 710 aaKnown RBP7.66□□□□□ -1.18
USP38-203ENST00000511739 CHMP7Q8WUX9 453 aaPredicted RBP7.65□□□□□ -1.19
USP38-203ENST00000511739 TRHP20396 242 aaPredicted RBP7.64□□□□□ -1.19
USP38-203ENST00000511739 CHIC2Q9UKJ5 165 aa7.63□□□□□ -1.19
USP38-203ENST00000511739 SOGA1O94964 1423 aa7.63□□□□□ -1.19
USP38-203ENST00000511739 ABCC8Q09428 1581 aa7.63□□□□□ -1.19
USP38-203ENST00000511739 GOLGA2Q08379 1002 aa7.63□□□□□ -1.19
USP38-203ENST00000511739 HNRNPUQ00839 825 aaKnown RBP eCLIP7.63□□□□□ -1.19
USP38-203ENST00000511739 KCNH8Q96L42 1107 aa7.63□□□□□ -1.19
USP38-203ENST00000511739 GTF3C3Q9Y5Q9 886 aa7.63□□□□□ -1.19
USP38-203ENST00000511739 CLSTN1O94985 981 aa7.62□□□□□ -1.19
USP38-203ENST00000511739 TAOK2Q9UL54 1235 aa7.61□□□□□ -1.19
USP38-203ENST00000511739 PPM1GO15355 546 aaPredicted RBP7.61□□□□□ -1.19
USP38-203ENST00000511739 FHAD1B1AJZ9 1412 aa7.6□□□□□ -1.19
USP38-203ENST00000511739 GLIPR1L2Q4G1C9 344 aa7.6□□□□□ -1.19
USP38-203ENST00000511739 CCDC136Q96JN2 1154 aa7.6□□□□□ -1.19
USP38-203ENST00000511739 VPS8Q8N3P4 1428 aa7.6□□□□□ -1.19
USP38-203ENST00000511739 ISY1Q9ULR0 285 aaKnown RBP7.59□□□□□ -1.19
USP38-203ENST00000511739 MTUS2Q5JR59 1369 aa7.59□□□□□ -1.2
USP38-203ENST00000511739 CFAP53Q96M91 514 aa7.58□□□□□ -1.2
USP38-203ENST00000511739 CARMIL1Q5VZK9 1371 aa7.57□□□□□ -1.2
USP38-203ENST00000511739 CUX2O14529 1486 aa7.57□□□□□ -1.2
USP38-203ENST00000511739 CADPSQ9ULU8 1353 aa7.57□□□□□ -1.2
USP38-203ENST00000511739 EIF4G2P78344 907 aaKnown RBP eCLIP7.57□□□□□ -1.2
USP38-203ENST00000511739 CASC1Q6TDU7 716 aa7.57□□□□□ -1.2
USP38-203ENST00000511739 FKBP8Q14318 412 aa7.57□□□□□ -1.2
USP38-203ENST00000511739 GOLGA6L22H0YM25 854 aa7.57□□□□□ -1.2
USP38-203ENST00000511739 NCAPD3P42695 1498 aa7.56□□□□□ -1.2
USP38-203ENST00000511739 FGD1P98174 961 aa7.56□□□□□ -1.2
USP38-203ENST00000511739 TPRNQ4KMQ1 711 aa7.56□□□□□ -1.2
USP38-203ENST00000511739 PDS5BQ9NTI5 1447 aa7.55□□□□□ -1.2
USP38-203ENST00000511739 DDX10Q13206 875 aaKnown RBP7.55□□□□□ -1.2
USP38-203ENST00000511739 OS9Q13438 667 aaPredicted RBP7.55□□□□□ -1.2
USP38-203ENST00000511739 TMX4Q9H1E5 349 aaPredicted RBP7.55□□□□□ -1.2
USP38-203ENST00000511739 POGKQ9P215 609 aa7.54□□□□□ -1.2
USP38-203ENST00000511739 PRM3Q9NNZ6 103 aa7.54□□□□□ -1.2
USP38-203ENST00000511739 MRS2Q9HD23 443 aa7.54□□□□□ -1.2
USP38-203ENST00000511739 LAS1LQ9Y4W2 734 aaKnown RBP7.54□□□□□ -1.2
USP38-203ENST00000511739 NAP1L2Q9ULW6 460 aaPredicted RBP7.54□□□□□ -1.2
USP38-203ENST00000511739 PTMAP06454 111 aaKnown RBP7.53□□□□□ -1.2
USP38-203ENST00000511739 TRIM44Q96DX7 344 aaPredicted RBP7.53□□□□□ -1.2
USP38-203ENST00000511739 BECN1Q14457 450 aa7.53□□□□□ -1.2
USP38-203ENST00000511739 PLEKHD1A6NEE1 506 aa7.53□□□□□ -1.2
USP38-203ENST00000511739 RGL3Q3MIN7 710 aa7.52□□□□□ -1.2
USP38-203ENST00000511739 MAPK8IP3Q9UPT6 1336 aa7.52□□□□□ -1.21
USP38-203ENST00000511739 KCNJ4P48050 445 aa7.52□□□□□ -1.21
USP38-203ENST00000511739 FTSJ3Q8IY81 847 aaKnown RBP7.51□□□□□ -1.21
USP38-203ENST00000511739 CCNB3Q8WWL7 1395 aa7.51□□□□□ -1.21
USP38-203ENST00000511739 CDCA8Q53HL2 280 aa7.51□□□□□ -1.21
USP38-203ENST00000511739 NUDCQ9Y266 331 aa7.51□□□□□ -1.21
USP38-203ENST00000511739 NBR1Q14596 966 aa7.5□□□□□ -1.21
USP38-203ENST00000511739 CCDC9Q9Y3X0 531 aaKnown RBP7.5□□□□□ -1.21
USP38-203ENST00000511739 HMGXB3Q12766 1538 aa7.5□□□□□ -1.21
USP38-203ENST00000511739 KRI1Q8N9T8 703 aaKnown RBP7.5□□□□□ -1.21
USP38-203ENST00000511739 RAPGEF2Q9Y4G8 1499 aa7.5□□□□□ -1.21
USP38-203ENST00000511739 TIMELESSQ9UNS1 1208 aa7.5□□□□□ -1.21
USP38-203ENST00000511739 HDGFP51858 240 aaKnown RBP7.49□□□□□ -1.21
USP38-203ENST00000511739 DNTTIP2Q5QJE6 756 aaKnown RBP7.49□□□□□ -1.21
USP38-203ENST00000511739 ANP32EQ9BTT0 268 aa7.49□□□□□ -1.21
USP38-203ENST00000511739 GOLGA6L6A8MZA4 724 aa7.49□□□□□ -1.21
USP38-203ENST00000511739 EIF4G1Q04637 1599 aaKnown RBP7.49□□□□□ -1.21
USP38-203ENST00000511739 MLECQ14165 292 aa7.49□□□□□ -1.21
USP38-203ENST00000511739 KNSTRNQ9Y448 316 aa7.49□□□□□ -1.21
USP38-203ENST00000511739 FMN1Q68DA7 1419 aa7.48□□□□□ -1.21
USP38-203ENST00000511739 NRDCO43847 1150 aa7.48□□□□□ -1.21
USP38-203ENST00000511739 PLCB2Q00722 1185 aa7.48□□□□□ -1.21
USP38-203ENST00000511739 NEUROD2Q15784 382 aa7.48□□□□□ -1.21
USP38-203ENST00000511739 KIF21BO75037 1637 aa7.48□□□□□ -1.21
USP38-203ENST00000511739 PEG3Q9GZU2 1588 aa7.47□□□□□ -1.21
USP38-203ENST00000511739 SOX12O15370 315 aa7.47□□□□□ -1.21
USP38-203ENST00000511739 TNNT2P45379 298 aaPredicted RBP7.47□□□□□ -1.21
USP38-203ENST00000511739 G3V3G9 751 aa7.46□□□□□ -1.21
USP38-203ENST00000511739 DCAF8Q5TAQ9 597 aa7.46□□□□□ -1.21
USP38-203ENST00000511739 RRP7BPQ9NSQ0 103 aa7.46□□□□□ -1.22
USP38-203ENST00000511739 CHMP4BQ9H444 224 aaKnown RBP7.45□□□□□ -1.22
USP38-203ENST00000511739 BICRAQ9NZM4 1560 aa7.45□□□□□ -1.22
USP38-203ENST00000511739 DDRGK1Q96HY6 314 aa7.45□□□□□ -1.22
USP38-203ENST00000511739 ZNF330Q9Y3S2 320 aaPredicted RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms