RNA–Protein interactions for RNA: ENST00000511214.1

SNF8-210, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-210ENST00000511214 TIMELESSQ9UNS1 1208 aa13.14□□□□□ -0.31
SNF8-210ENST00000511214 FHAD1B1AJZ9 1412 aa13.11□□□□□ -0.31
SNF8-210ENST00000511214 IGF1RP08069 1367 aa13.1□□□□□ -0.31
SNF8-210ENST00000511214 MAPKBP1O60336 1514 aa13.1□□□□□ -0.31
SNF8-210ENST00000511214 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.09□□□□□ -0.31
SNF8-210ENST00000511214 RANGAP1P46060 587 aaPredicted RBP13.09□□□□□ -0.31
SNF8-210ENST00000511214 SETD5Q9C0A6 1442 aa13.09□□□□□ -0.31
SNF8-210ENST00000511214 LRRC9Q6ZRR7 1453 aa13.09□□□□□ -0.31
SNF8-210ENST00000511214 CFAP43Q8NDM7 1665 aa13.08□□□□□ -0.31
SNF8-210ENST00000511214 RAB3GAP2Q9H2M9 1393 aa13.08□□□□□ -0.31
SNF8-210ENST00000511214 SUPT16HQ9Y5B9 1047 aaKnown RBP13.08□□□□□ -0.32
SNF8-210ENST00000511214 CARMIL1Q5VZK9 1371 aa13.05□□□□□ -0.32
SNF8-210ENST00000511214 AQRO60306 1485 aaKnown RBP eCLIP13.04□□□□□ -0.323e-6■■■□□ 17.8
SNF8-210ENST00000511214 EFCAB5A4FU69 1503 aa13.03□□□□□ -0.32
SNF8-210ENST00000511214 CADPSQ9ULU8 1353 aa13.03□□□□□ -0.32
SNF8-210ENST00000511214 FGD5Q6ZNL6 1462 aa13□□□□□ -0.33
SNF8-210ENST00000511214 FYCO1Q9BQS8 1478 aa13□□□□□ -0.33
SNF8-210ENST00000511214 PHLDB1Q86UU1 1377 aa12.98□□□□□ -0.33
SNF8-210ENST00000511214 CASKIN1Q8WXD9 1431 aa12.97□□□□□ -0.33
SNF8-210ENST00000511214 CC2D2AQ9P2K1 1620 aa12.97□□□□□ -0.33
SNF8-210ENST00000511214 PCF11O94913 1555 aaKnown RBP12.97□□□□□ -0.33
SNF8-210ENST00000511214 CCER2I3L3R5 266 aa12.96□□□□□ -0.33
SNF8-210ENST00000511214 CUL7Q14999 1698 aa12.95□□□□□ -0.34
SNF8-210ENST00000511214 WDR97A6NE52 1622 aa12.94□□□□□ -0.34
SNF8-210ENST00000511214 ABCA10Q8WWZ4 1543 aa12.93□□□□□ -0.34
SNF8-210ENST00000511214 DNMBPQ6XZF7 1577 aa12.93□□□□□ -0.34
SNF8-210ENST00000511214 PPP1R15AO75807 674 aaPredicted RBP12.92□□□□□ -0.34
SNF8-210ENST00000511214 PPP4R3CPQ6ZMV5 832 aa12.91□□□□□ -0.34
SNF8-210ENST00000511214 TSHZ2Q9NRE2 1034 aa12.91□□□□□ -0.34
SNF8-210ENST00000511214 FMN1Q68DA7 1419 aa12.9□□□□□ -0.34
SNF8-210ENST00000511214 ITGAEP38570 1179 aa12.9□□□□□ -0.34
SNF8-210ENST00000511214 THOC2Q8NI27 1593 aaKnown RBP12.89□□□□□ -0.35
SNF8-210ENST00000511214 CTTNBP2Q8WZ74 1663 aa12.89□□□□□ -0.35
SNF8-210ENST00000511214 FANCD2Q9BXW9 1451 aa12.87□□□□□ -0.35
SNF8-210ENST00000511214 HFM1A2PYH4 1435 aa12.87□□□□□ -0.35
SNF8-210ENST00000511214 FGD6Q6ZV73 1430 aa12.87□□□□□ -0.35
SNF8-210ENST00000511214 FAM50AQ14320 339 aaKnown RBP12.86□□□□□ -0.35
SNF8-210ENST00000511214 UACAQ9BZF9 1416 aa12.86□□□□□ -0.35
SNF8-210ENST00000511214 ANP32CO43423 234 aa12.84□□□□□ -0.35
SNF8-210ENST00000511214 FHOD3Q2V2M9 1422 aa12.84□□□□□ -0.35
SNF8-210ENST00000511214 SNAPC4Q5SXM2 1469 aa12.84□□□□□ -0.35
SNF8-210ENST00000511214 DDX10Q13206 875 aaKnown RBP12.83□□□□□ -0.36
SNF8-210ENST00000511214 SIN3AQ96ST3 1273 aa12.83□□□□□ -0.36
SNF8-210ENST00000511214 CCDC18Q5T9S5 1454 aa12.83□□□□□ -0.36
SNF8-210ENST00000511214 TOPBP1Q92547 1522 aa12.83□□□□□ -0.36
SNF8-210ENST00000511214 SAMD9Q5K651 1589 aa12.82□□□□□ -0.36
SNF8-210ENST00000511214 NEFLP07196 543 aa12.82□□□□□ -0.36
SNF8-210ENST00000511214 ANP32EQ9BTT0 268 aa12.82□□□□□ -0.36
SNF8-210ENST00000511214 POLA1P09884 1462 aaPredicted RBP12.82□□□□□ -0.36
SNF8-210ENST00000511214 TONSLQ96HA7 1378 aa12.81□□□□□ -0.36
SNF8-210ENST00000511214 PTPN23Q9H3S7 1636 aa12.81□□□□□ -0.36
SNF8-210ENST00000511214 KIF21AQ7Z4S6 1674 aa12.81□□□□□ -0.36
SNF8-210ENST00000511214 EHBP1L1Q8N3D4 1523 aa12.8□□□□□ -0.36
SNF8-210ENST00000511214 KCNH8Q96L42 1107 aa12.79□□□□□ -0.36
SNF8-210ENST00000511214 AKNAQ7Z591 1439 aa12.79□□□□□ -0.36
SNF8-210ENST00000511214 MYOM3Q5VTT5 1437 aa12.78□□□□□ -0.36
SNF8-210ENST00000511214 GRIN2BQ13224 1484 aa12.78□□□□□ -0.36
SNF8-210ENST00000511214 ARHGEF11O15085 1522 aa12.77□□□□□ -0.37
SNF8-210ENST00000511214 SUPT6HQ7KZ85 1726 aaKnown RBP12.76□□□□□ -0.37
SNF8-210ENST00000511214 FKBP8Q14318 412 aa12.76□□□□□ -0.37
SNF8-210ENST00000511214 MTUS2Q5JR59 1369 aa12.76□□□□□ -0.37
SNF8-210ENST00000511214 NAIPQ13075 1403 aa12.76□□□□□ -0.37
SNF8-210ENST00000511214 RAD54L2Q9Y4B4 1467 aa12.76□□□□□ -0.37
SNF8-210ENST00000511214 TCOF1Q13428 1488 aaKnown RBP12.75□□□□□ -0.37
SNF8-210ENST00000511214 ABCA5Q8WWZ7 1642 aa12.74□□□□□ -0.37
SNF8-210ENST00000511214 NCOA2Q15596 1464 aa12.74□□□□□ -0.37
SNF8-210ENST00000511214 ERICH6BQ5W0A0 696 aa12.74□□□□□ -0.37
SNF8-210ENST00000511214 LAMC3Q9Y6N6 1575 aa12.73□□□□□ -0.37
SNF8-210ENST00000511214 UGGT2Q9NYU1 1516 aa12.73□□□□□ -0.37
SNF8-210ENST00000511214 KDM5BQ9UGL1 1544 aa12.73□□□□□ -0.37
SNF8-210ENST00000511214 GCC2Q8IWJ2 1684 aa12.73□□□□□ -0.37
SNF8-210ENST00000511214 HECW1Q76N89 1606 aa12.73□□□□□ -0.37
SNF8-210ENST00000511214 PTPRKQ15262 1439 aa12.72□□□□□ -0.37
SNF8-210ENST00000511214 P3H3Q8IVL6 736 aa12.71□□□□□ -0.37
SNF8-210ENST00000511214 ATP1B4Q9UN42 357 aaPredicted RBP12.7□□□□□ -0.38
SNF8-210ENST00000511214 MAPK8IP2Q13387 824 aaPredicted RBP12.69□□□□□ -0.38
SNF8-210ENST00000511214 LRRIQ1Q96JM4 1722 aa12.68□□□□□ -0.38
SNF8-210ENST00000511214 MIA2Q96PC5 1412 aa12.68□□□□□ -0.38
SNF8-210ENST00000511214 GAPVD1Q14C86 1478 aa12.66□□□□□ -0.38
SNF8-210ENST00000511214 KCNA4P22459 653 aa12.66□□□□□ -0.38
SNF8-210ENST00000511214 URB2Q14146 1524 aaKnown RBP12.66□□□□□ -0.38
SNF8-210ENST00000511214 BCANQ96GW7 911 aa12.64□□□□□ -0.39
SNF8-210ENST00000511214 RBM19Q9Y4C8 960 aaKnown RBP12.64□□□□□ -0.39
SNF8-210ENST00000511214 CNTLNQ9NXG0 1405 aa12.62□□□□□ -0.39
SNF8-210ENST00000511214 TRIM52Q96A61 297 aa12.62□□□□□ -0.39
SNF8-210ENST00000511214 PDS5BQ9NTI5 1447 aa12.62□□□□□ -0.39
SNF8-210ENST00000511214 FANCIQ9NVI1 1328 aa12.62□□□□□ -0.39
SNF8-210ENST00000511214 ROCK1Q13464 1354 aa12.61□□□□□ -0.39
SNF8-210ENST00000511214 EIF4G2P78344 907 aaKnown RBP eCLIP12.6□□□□□ -0.39
SNF8-210ENST00000511214 DNAJC5BQ9UF47 199 aa12.6□□□□□ -0.39
SNF8-210ENST00000511214 DENND4BO75064 1496 aaPredicted RBP12.59□□□□□ -0.39
SNF8-210ENST00000511214 MAGI3Q5TCQ9 1506 aa12.59□□□□□ -0.39
SNF8-210ENST00000511214 NCOA1Q15788 1441 aa12.59□□□□□ -0.39
SNF8-210ENST00000511214 NESP48681 1621 aa12.59□□□□□ -0.39
SNF8-210ENST00000511214 HSPA5P11021 654 aaKnown RBP12.58□□□□□ -0.4
SNF8-210ENST00000511214 HIRIP3Q9BW71 556 aaPredicted RBP12.58□□□□□ -0.4
SNF8-210ENST00000511214 WASHC2AQ641Q2 1341 aa12.58□□□□□ -0.4
SNF8-210ENST00000511214 EPRSP07814 1512 aaKnown RBP12.57□□□□□ -0.4
SNF8-210ENST00000511214 TARBP1Q13395 1621 aaKnown RBP12.57□□□□□ -0.4
SNF8-210ENST00000511214 IQGAP2Q13576 1575 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms