RNA–Protein interactions for RNA: ENST00000510241.5

APBB3-215, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 2

Gene APBB3, Length 2,801 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-215ENST00000510241 ANP32CO43423 234 aa22.63■■□□□ 1.21
APBB3-215ENST00000510241 ARHGAP35Q9NRY4 1499 aa22.6■■□□□ 1.21
APBB3-215ENST00000510241 CNGB1Q14028 1251 aaPredicted RBP22.58■■□□□ 1.21
APBB3-215ENST00000510241 PHLDB1Q86UU1 1377 aa22.57■■□□□ 1.2
APBB3-215ENST00000510241 SENP3-EIF4A1A0A087X0R7 540 aa22.57■■□□□ 1.2
APBB3-215ENST00000510241 HNRNPUQ00839 825 aaKnown RBP eCLIP22.57■■□□□ 1.2
APBB3-215ENST00000510241 SETD5Q9C0A6 1442 aa22.55■■□□□ 1.2
APBB3-215ENST00000510241 TOP2BQ02880 1626 aa22.54■■□□□ 1.2
APBB3-215ENST00000510241 KIF27Q86VH2 1401 aa22.47■■□□□ 1.19
APBB3-215ENST00000510241 CUX2O14529 1486 aa22.46■■□□□ 1.19
APBB3-215ENST00000510241 CUX1P39880 1505 aa22.46■■□□□ 1.19
APBB3-215ENST00000510241 CCDC184Q52MB2 194 aa22.45■■□□□ 1.18
APBB3-215ENST00000510241 ERICH3Q5RHP9 1530 aa22.42■■□□□ 1.18
APBB3-215ENST00000510241 PEG3Q9GZU2 1588 aa22.41■■□□□ 1.18
APBB3-215ENST00000510241 ERICH6Q7L0X2 663 aa22.41■■□□□ 1.18
APBB3-215ENST00000510241 B4GALNT3Q6L9W6 998 aa22.37■■□□□ 1.17
APBB3-215ENST00000510241 CCER2I3L3R5 266 aa22.36■■□□□ 1.17
APBB3-215ENST00000510241 CDK11AQ9UQ88 783 aaPredicted RBP22.36■■□□□ 1.17
APBB3-215ENST00000510241 TONSLQ96HA7 1378 aa22.36■■□□□ 1.17
APBB3-215ENST00000510241 FAM9BQ8IZU0 186 aa22.35■■□□□ 1.17
APBB3-215ENST00000510241 IGF1RP08069 1367 aa22.33■■□□□ 1.17
APBB3-215ENST00000510241 LRRC9Q6ZRR7 1453 aa22.32■■□□□ 1.16
APBB3-215ENST00000510241 CHIC2Q9UKJ5 165 aa22.31■■□□□ 1.16
APBB3-215ENST00000510241 BIVM-ERCC5R4GMW8 1640 aa22.29■■□□□ 1.16
APBB3-215ENST00000510241 NBR1Q14596 966 aa22.28■■□□□ 1.16
APBB3-215ENST00000510241 TIAM1Q13009 1591 aa22.28■■□□□ 1.16
APBB3-215ENST00000510241 FHOD3Q2V2M9 1422 aa22.28■■□□□ 1.16
APBB3-215ENST00000510241 FOXD1Q16676 465 aa22.27■■□□□ 1.16
APBB3-215ENST00000510241 CARMIL1Q5VZK9 1371 aa22.26■■□□□ 1.15
APBB3-215ENST00000510241 ARID3CA6NKF2 412 aa22.26■■□□□ 1.15
APBB3-215ENST00000510241 RRP7BPQ9NSQ0 103 aa22.26■■□□□ 1.15
APBB3-215ENST00000510241 HSPA5P11021 654 aaKnown RBP22.22■■□□□ 1.15
APBB3-215ENST00000510241 WASHC2AQ641Q2 1341 aa22.22■■□□□ 1.15
APBB3-215ENST00000510241 C11orf95C9JLR9 678 aaPredicted RBP22.2■■□□□ 1.14
APBB3-215ENST00000510241 POLR3GLQ9BT43 218 aa22.17■■□□□ 1.14
APBB3-215ENST00000510241 PTPRKQ15262 1439 aa22.17■■□□□ 1.14
APBB3-215ENST00000510241 PAK3O75914 559 aaPredicted RBP22.16■■□□□ 1.14
APBB3-215ENST00000510241 AQRO60306 1485 aaKnown RBP eCLIP22.16■■□□□ 1.142e-6■■■■■ 39.8
APBB3-215ENST00000510241 FANCIQ9NVI1 1328 aa22.13■■□□□ 1.13
APBB3-215ENST00000510241 DEKP35659 375 aaKnown RBP22.13■■□□□ 1.13
APBB3-215ENST00000510241 MRS2Q9HD23 443 aa22.12■■□□□ 1.13
APBB3-215ENST00000510241 PCF11O94913 1555 aaKnown RBP22.11■■□□□ 1.13
APBB3-215ENST00000510241 TIMELESSQ9UNS1 1208 aa22.09■■□□□ 1.13
APBB3-215ENST00000510241 CCDC18Q5T9S5 1454 aa22.08■■□□□ 1.13
APBB3-215ENST00000510241 PPP4R2Q9NY27 417 aa22.08■■□□□ 1.13
APBB3-215ENST00000510241 MTUS2Q5JR59 1369 aa22.04■■□□□ 1.12
APBB3-215ENST00000510241 FGD5Q6ZNL6 1462 aa22.02■■□□□ 1.11
APBB3-215ENST00000510241 CFTRP13569 1480 aa22.01■■□□□ 1.11
APBB3-215ENST00000510241 L3MBTL2Q969R5 705 aa22.01■■□□□ 1.11
APBB3-215ENST00000510241 FHAD1B1AJZ9 1412 aa22■■□□□ 1.11
APBB3-215ENST00000510241 EIF4G2P78344 907 aaKnown RBP eCLIP22■■□□□ 1.11
APBB3-215ENST00000510241 FGD6Q6ZV73 1430 aa22■■□□□ 1.11
APBB3-215ENST00000510241 PRKRIP1Q9H875 184 aaPredicted RBP21.99■■□□□ 1.11
APBB3-215ENST00000510241 RAD54L2Q9Y4B4 1467 aa21.99■■□□□ 1.11
APBB3-215ENST00000510241 ZNF326Q5BKZ1 582 aaKnown RBP21.98■■□□□ 1.11
APBB3-215ENST00000510241 AKNAQ7Z591 1439 aa21.95■■□□□ 1.1
APBB3-215ENST00000510241 SALL2Q9Y467 1007 aaPredicted RBP21.93■■□□□ 1.1
APBB3-215ENST00000510241 UACAQ9BZF9 1416 aa21.93■■□□□ 1.1
APBB3-215ENST00000510241 NBPF8Q3BBV2 869 aa21.93■■□□□ 1.1
APBB3-215ENST00000510241 NAIPQ13075 1403 aa21.93■■□□□ 1.1
APBB3-215ENST00000510241 NOP58Q9Y2X3 529 aaKnown RBP21.93■■□□□ 1.1
APBB3-215ENST00000510241 NPM2Q86SE8 214 aaKnown RBP21.92■■□□□ 1.1
APBB3-215ENST00000510241 NCAPD3P42695 1498 aa21.91■■□□□ 1.1
APBB3-215ENST00000510241 MAP3K1Q13233 1512 aa21.91■■□□□ 1.1
APBB3-215ENST00000510241 RTN4Q9NQC3 1192 aaKnown RBP21.89■■□□□ 1.1
APBB3-215ENST00000510241 KDM5BQ9UGL1 1544 aa21.88■■□□□ 1.09
APBB3-215ENST00000510241 HFM1A2PYH4 1435 aa21.87■■□□□ 1.09
APBB3-215ENST00000510241 MPHOSPH9Q99550 1183 aa21.86■■□□□ 1.09
APBB3-215ENST00000510241 CCDC136Q96JN2 1154 aa21.86■■□□□ 1.09
APBB3-215ENST00000510241 PTPN23Q9H3S7 1636 aa21.84■■□□□ 1.09
APBB3-215ENST00000510241 CFAP43Q8NDM7 1665 aa21.83■■□□□ 1.09
APBB3-215ENST00000510241 CASKIN1Q8WXD9 1431 aa21.83■■□□□ 1.08
APBB3-215ENST00000510241 KIF7Q2M1P5 1343 aa21.82■■□□□ 1.08
APBB3-215ENST00000510241 ANO8Q9HCE9 1232 aaPredicted RBP21.82■■□□□ 1.08
APBB3-215ENST00000510241 CCDC7Q96M83 1385 aa21.82■■□□□ 1.08
APBB3-215ENST00000510241 CNTLNQ9NXG0 1405 aa21.81■■□□□ 1.08
APBB3-215ENST00000510241 SKAP1Q86WV1 359 aa21.81■■□□□ 1.08
APBB3-215ENST00000510241 ZBED9Q6R2W3 1325 aa21.81■■□□□ 1.08
APBB3-215ENST00000510241 NCOA2Q15596 1464 aa21.8■■□□□ 1.08
APBB3-215ENST00000510241 CADPSQ9ULU8 1353 aa21.8■■□□□ 1.08
APBB3-215ENST00000510241 DENND4BO75064 1496 aaPredicted RBP21.79■■□□□ 1.08
APBB3-215ENST00000510241 TDRD9Q8NDG6 1382 aaKnown RBP21.79■■□□□ 1.08
APBB3-215ENST00000510241 FMN1Q68DA7 1419 aa21.78■■□□□ 1.08
APBB3-215ENST00000510241 FYCO1Q9BQS8 1478 aa21.78■■□□□ 1.08
APBB3-215ENST00000510241 LAS1LQ9Y4W2 734 aaKnown RBP21.77■■□□□ 1.08
APBB3-215ENST00000510241 KDM6BO15054 1643 aa21.77■■□□□ 1.08
APBB3-215ENST00000510241 IL27Q8NEV9 243 aa21.76■■□□□ 1.07
APBB3-215ENST00000510241 ZNF644Q9H582 1327 aaPredicted RBP21.74■■□□□ 1.07
APBB3-215ENST00000510241 HMGXB3Q12766 1538 aa21.74■■□□□ 1.07
APBB3-215ENST00000510241 MYOM3Q5VTT5 1437 aa21.73■■□□□ 1.07
APBB3-215ENST00000510241 ANP32AP39687 249 aaKnown RBP21.71■■□□□ 1.07
APBB3-215ENST00000510241 ZBTB47Q9UFB7 747 aaPredicted RBP21.71■■□□□ 1.07
APBB3-215ENST00000510241 SLC4A1APQ9BWU0 796 aaKnown RBP21.7■■□□□ 1.07
APBB3-215ENST00000510241 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.7■■□□□ 1.06
APBB3-215ENST00000510241 ERICH6BQ5W0A0 696 aa21.69■■□□□ 1.06
APBB3-215ENST00000510241 IPO9Q96P70 1041 aaKnown RBP21.68■■□□□ 1.06
APBB3-215ENST00000510241 SNAPC4Q5SXM2 1469 aa21.68■■□□□ 1.06
APBB3-215ENST00000510241 NCOA1Q15788 1441 aa21.67■■□□□ 1.06
APBB3-215ENST00000510241 RTL5Q5HYW3 569 aaPredicted RBP21.66■■□□□ 1.06
APBB3-215ENST00000510241 NESP48681 1621 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 144.9 ms